Protein–RNA interactions for Protein: P03979

TRGV3, T cell receptor gamma variable 3 (Fragment), humanhuman

Predictions only

Length 118 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRGV3P03979 C1orf167-202ENST00000433342 4545 ntAPPRIS P5 TSL 5 BASIC10.87□□□□□ -0.67
TRGV3P03979 SAMD15-201ENST00000216471 2564 ntAPPRIS P1 TSL 2 BASIC10.87□□□□□ -0.67
TRGV3P03979 SCD5-202ENST00000319540 3101 ntAPPRIS P1 TSL 1 (best) BASIC10.87□□□□□ -0.67
TRGV3P03979 PPP1R13L-201ENST00000360957 3104 ntAPPRIS P1 TSL 1 (best) BASIC10.87□□□□□ -0.67
TRGV3P03979 AC073548.1-201ENST00000624088 1882 ntBASIC10.87□□□□□ -0.67
TRGV3P03979 ZNF135-205ENST00000511556 2253 ntAPPRIS P3 TSL 2 BASIC10.87□□□□□ -0.67
TRGV3P03979 CALCOCO1-218ENST00000550804 2291 ntAPPRIS P2 TSL 1 (best) BASIC10.87□□□□□ -0.67
TRGV3P03979 OPRL1-202ENST00000349451 3369 ntAPPRIS P1 TSL 1 (best) BASIC10.87□□□□□ -0.67
TRGV3P03979 TSEN2-202ENST00000402228 2149 ntAPPRIS P1 TSL 1 (best) BASIC10.87□□□□□ -0.67
TRGV3P03979 GREB1-206ENST00000396123 5296 ntTSL 1 (best) BASIC10.87□□□□□ -0.67
TRGV3P03979 AC009474.1-201ENST00000455096 1565 ntBASIC10.87□□□□□ -0.67
TRGV3P03979 PPP1R3D-201ENST00000370996 3630 ntAPPRIS P1 BASIC10.87□□□□□ -0.67
TRGV3P03979 INSRR-201ENST00000368195 5101 ntAPPRIS P1 TSL 1 (best) BASIC10.87□□□□□ -0.67
TRGV3P03979 NCLP1-201ENST00000445357 1963 ntBASIC10.87□□□□□ -0.67
TRGV3P03979 POMT1-201ENST00000341012 2912 ntTSL 2 BASIC10.87□□□□□ -0.67
TRGV3P03979 PVR-205ENST00000425690 3325 ntAPPRIS P3 TSL 1 (best) BASIC10.87□□□□□ -0.67
TRGV3P03979 DAXX-201ENST00000266000 2606 ntAPPRIS P2 TSL 1 (best) BASIC10.87□□□□□ -0.67
TRGV3P03979 TPM1-202ENST00000288398 1295 ntTSL 1 (best) BASIC10.87□□□□□ -0.67
TRGV3P03979 DERL3-202ENST00000318109 860 ntAPPRIS P3 TSL 1 (best) BASIC10.87□□□□□ -0.67
TRGV3P03979 RPP40-201ENST00000319533 1088 ntTSL 1 (best) BASIC10.87□□□□□ -0.67
TRGV3P03979 HNRNPA1-201ENST00000330752 1294 ntTSL 5 BASIC10.87□□□□□ -0.67
TRGV3P03979 SLC25A26-201ENST00000336733 1023 ntTSL 1 (best) BASIC10.87□□□□□ -0.67
TRGV3P03979 NUDT2-201ENST00000346365 960 ntAPPRIS P1 TSL 1 (best) BASIC10.87□□□□□ -0.67
TRGV3P03979 FMR1NB-201ENST00000370467 1021 ntAPPRIS P1 TSL 1 (best) BASIC10.87□□□□□ -0.67
TRGV3P03979 NUDT2-202ENST00000379155 1002 ntAPPRIS P1 TSL 3 BASIC10.87□□□□□ -0.67
TRGV3P03979 GSTT2-201ENST00000402588 937 ntTSL 1 (best) BASIC10.87□□□□□ -0.67
TRGV3P03979 Metazoa_SRP.9-201ENST00000415635 283 ntBASIC10.87□□□□□ -0.67
TRGV3P03979 NSD2-209ENST00000436793 835 ntTSL 1 (best) BASIC10.87□□□□□ -0.67
TRGV3P03979 RN7SL81P-201ENST00000493781 261 ntBASIC10.87□□□□□ -0.67
TRGV3P03979 AC019193.1-201ENST00000506678 823 ntBASIC10.87□□□□□ -0.67
TRGV3P03979 AC095040.1-201ENST00000513286 675 ntBASIC10.87□□□□□ -0.67
TRGV3P03979 NEU3-205ENST00000531619 582 ntTSL 5 BASIC10.87□□□□□ -0.67
TRGV3P03979 OR5BD1P-201ENST00000532527 817 ntBASIC10.87□□□□□ -0.67
TRGV3P03979 AC025154.2-201ENST00000550530 445 ntTSL 3 BASIC10.87□□□□□ -0.67
TRGV3P03979 AC079174.1-201ENST00000552486 312 ntTSL 3 BASIC10.87□□□□□ -0.67
TRGV3P03979 LINC01500-204ENST00000556815 752 ntTSL 3 BASIC10.87□□□□□ -0.67
TRGV3P03979 AC105129.2-201ENST00000559536 390 ntBASIC10.87□□□□□ -0.67
TRGV3P03979 TMEM219-203ENST00000561899 1249 ntAPPRIS P1 TSL 2 BASIC10.87□□□□□ -0.67
TRGV3P03979 FAM104A-206ENST00000583024 417 ntTSL 3 BASIC10.87□□□□□ -0.67
TRGV3P03979 AC079336.4-201ENST00000584219 408 ntTSL 2 BASIC10.87□□□□□ -0.67
TRGV3P03979 AC011444.1-201ENST00000587836 639 ntTSL 3 BASIC10.87□□□□□ -0.67
TRGV3P03979 AL031673.1-201ENST00000611460 466 ntBASIC10.87□□□□□ -0.67
TRGV3P03979 AC087392.5-201ENST00000612517 489 ntBASIC10.87□□□□□ -0.67
TRGV3P03979 HPX-213ENST00000615166 826 ntTSL 5 BASIC10.87□□□□□ -0.67
TRGV3P03979 NUDT2-204ENST00000618590 825 ntAPPRIS P1 TSL 3 BASIC10.87□□□□□ -0.67
TRGV3P03979 AC009145.4-201ENST00000625119 1294 ntBASIC10.87□□□□□ -0.67
TRGV3P03979 CPA5-205ENST00000466363 2099 ntAPPRIS P1 TSL 5 BASIC10.87□□□□□ -0.67
TRGV3P03979 GPR132-202ENST00000392585 2887 ntAPPRIS ALT2 TSL 1 (best) BASIC10.87□□□□□ -0.67
TRGV3P03979 KRT74-203ENST00000549343 2858 ntTSL 5 BASIC10.87□□□□□ -0.67
TRGV3P03979 ATG9A-201ENST00000361242 3130 ntAPPRIS P1 TSL 2 BASIC10.87□□□□□ -0.67
TRGV3P03979 USP22-206ENST00000537526 4976 ntAPPRIS ALT2 TSL 1 (best) BASIC10.87□□□□□ -0.67
TRGV3P03979 VPS52-212ENST00000445902 2960 ntAPPRIS P1 TSL 1 (best) BASIC10.87□□□□□ -0.67
TRGV3P03979 ANKS1B-208ENST00000547010 2595 ntTSL 1 (best) BASIC10.87□□□□□ -0.67
TRGV3P03979 C22orf34-204ENST00000414287 2197 ntTSL 1 (best) BASIC10.87□□□□□ -0.67
TRGV3P03979 SYT4-205ENST00000590752 1765 ntTSL 2 BASIC10.87□□□□□ -0.67
TRGV3P03979 CFAP36-201ENST00000339012 1373 ntTSL 1 (best) BASIC10.87□□□□□ -0.67
TRGV3P03979 SNHG1-213ENST00000540725 1374 ntTSL 1 (best) BASIC10.87□□□□□ -0.67
TRGV3P03979 GFPT2-201ENST00000253778 3093 ntAPPRIS P1 TSL 1 (best) BASIC10.87□□□□□ -0.67
TRGV3P03979 LDB3-205ENST00000429277 5436 ntTSL 2 BASIC10.87□□□□□ -0.67
TRGV3P03979 PLA2G3-201ENST00000215885 2697 ntAPPRIS P1 TSL 1 (best) BASIC10.87□□□□□ -0.67
TRGV3P03979 APBB2-211ENST00000506352 3316 ntAPPRIS ALT1 TSL 5 BASIC10.87□□□□□ -0.67
TRGV3P03979 PLAT-211ENST00000524009 1613 ntTSL 2 BASIC10.87□□□□□ -0.67
TRGV3P03979 AMOTL2-202ENST00000422605 4335 ntAPPRIS ALT2 TSL 5 BASIC10.87□□□□□ -0.67
TRGV3P03979 RNF214-201ENST00000300650 2755 ntAPPRIS P1 TSL 1 (best) BASIC10.87□□□□□ -0.67
TRGV3P03979 TRMT10B-207ENST00000537911 2108 ntTSL 2 BASIC10.87□□□□□ -0.67
TRGV3P03979 ARHGEF9-230ENST00000637178 2145 ntTSL 5 BASIC10.87□□□□□ -0.67
TRGV3P03979 LAIR1-201ENST00000348231 1467 ntAPPRIS ALT2 TSL 1 (best) BASIC10.87□□□□□ -0.67
TRGV3P03979 AF013593.1-201ENST00000458074 1487 ntBASIC10.87□□□□□ -0.67
TRGV3P03979 UBBP4-202ENST00000584755 1459 ntTSL 1 (best) BASIC10.87□□□□□ -0.67
TRGV3P03979 AC025183.3-201ENST00000623526 1482 ntBASIC10.87□□□□□ -0.67
TRGV3P03979 ADAMTS9-210ENST00000498707 7624 ntAPPRIS P1 TSL 1 (best) BASIC10.87□□□□□ -0.67
TRGV3P03979 MARK2P9-201ENST00000430958 1727 ntBASIC10.87□□□□□ -0.67
TRGV3P03979 RAB40A-201ENST00000304236 1969 ntAPPRIS P1 TSL 2 BASIC10.86□□□□□ -0.67
TRGV3P03979 ZNF202-206ENST00000529691 3384 ntAPPRIS P1 TSL 2 BASIC10.86□□□□□ -0.67
TRGV3P03979 HNRNPH1-204ENST00000442819 2248 ntAPPRIS P1 TSL 1 (best) BASIC10.86□□□□□ -0.67
TRGV3P03979 USH1C-201ENST00000005226 2700 ntAPPRIS P3 TSL 5 BASIC10.86□□□□□ -0.67
TRGV3P03979 SPHK2-201ENST00000245222 2963 ntAPPRIS P3 TSL 1 (best) BASIC10.86□□□□□ -0.67
TRGV3P03979 SMIM12-206ENST00000521580 3454 ntAPPRIS P1 TSL 1 (best) BASIC10.86□□□□□ -0.67
TRGV3P03979 BIN3-202ENST00000399977 1340 ntTSL 2 BASIC10.86□□□□□ -0.67
TRGV3P03979 WTIP-202ENST00000590071 13665 ntAPPRIS P1 TSL 1 (best) BASIC10.86□□□□□ -0.67
TRGV3P03979 AC009542.1-201ENST00000412549 1810 ntTSL 2 BASIC10.86□□□□□ -0.67
TRGV3P03979 STK25-235ENST00000543554 2556 ntTSL 2 BASIC10.86□□□□□ -0.67
TRGV3P03979 TRMT2B-203ENST00000372939 3078 ntAPPRIS ALT2 TSL 1 (best) BASIC10.86□□□□□ -0.67
TRGV3P03979 PPP6C-203ENST00000451402 4349 ntTSL 2 BASIC10.86□□□□□ -0.67
TRGV3P03979 MARK1-201ENST00000366917 2946 ntAPPRIS P3 TSL 1 (best) BASIC10.86□□□□□ -0.67
TRGV3P03979 ATP6V0A1-206ENST00000585525 2679 ntTSL 2 BASIC10.86□□□□□ -0.67
TRGV3P03979 LINC01873-201ENST00000428647 1679 ntTSL 1 (best) BASIC10.86□□□□□ -0.67
TRGV3P03979 LIN54-201ENST00000340417 6127 ntAPPRIS P1 TSL 1 (best) BASIC10.86□□□□□ -0.67
TRGV3P03979 JUN-201ENST00000371222 3540 ntAPPRIS P1 BASIC10.86□□□□□ -0.67
TRGV3P03979 ACTR3-201ENST00000263238 6718 ntAPPRIS P1 TSL 1 (best) BASIC10.86□□□□□ -0.67
TRGV3P03979 DNAJB6-201ENST00000262177 2527 ntAPPRIS P3 TSL 1 (best) BASIC10.86□□□□□ -0.67
TRGV3P03979 ATG9A-204ENST00000409422 2512 ntTSL 5 BASIC10.86□□□□□ -0.67
TRGV3P03979 MAMDC4-202ENST00000445819 3895 ntAPPRIS ALT2 TSL 5 BASIC10.86□□□□□ -0.67
TRGV3P03979 L3MBTL1-204ENST00000418998 3365 ntAPPRIS ALT2 TSL 2 BASIC10.86□□□□□ -0.67
TRGV3P03979 FAM224A-201ENST00000419557 2031 ntTSL 2 BASIC10.86□□□□□ -0.67
TRGV3P03979 HPSE2-206ENST00000628193 1760 ntTSL 1 (best) BASIC10.86□□□□□ -0.67
TRGV3P03979 CRYBB1-201ENST00000215939 1102 ntAPPRIS P1 TSL 1 (best) BASIC10.86□□□□□ -0.67
TRGV3P03979 INVS-201ENST00000262456 2968 ntTSL 5 BASIC10.86□□□□□ -0.67
TRGV3P03979 POLD4-201ENST00000312419 918 ntAPPRIS P1 TSL 1 (best) BASIC10.86□□□□□ -0.67
TRGV3P03979 SRA1-201ENST00000336283 2107 ntAPPRIS P1 TSL 1 (best) BASIC10.86□□□□□ -0.67
Retrieved 100 of 98,524 protein–RNA pairs in 47.4 ms