Protein–RNA interactions for Protein: O00533

CHL1, Neural cell adhesion molecule L1-like protein, humanhuman

Predictions only

Length 1,208 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CHL1O00533 AL591806.3-201ENST00000289779 2096 ntAPPRIS P5 TSL 2 BASIC17.38■□□□□ 0.37
CHL1O00533 TBC1D3L-201ENST00000612727 2148 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
CHL1O00533 AC005562.1-201ENST00000583030 3219 ntBASIC17.38■□□□□ 0.37
CHL1O00533 DYM-201ENST00000269445 5049 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
CHL1O00533 BX255923.2-202ENST00000620833 2874 ntTSL 1 (best) BASIC17.38■□□□□ 0.37
CHL1O00533 PPM1K-201ENST00000295908 1940 ntTSL 5 BASIC17.37■□□□□ 0.37
CHL1O00533 UGT3A1-203ENST00000503189 1902 ntTSL 2 BASIC17.37■□□□□ 0.37
CHL1O00533 RGP1-201ENST00000378078 7018 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
CHL1O00533 CALML3-201ENST00000315238 2763 ntAPPRIS P1 BASIC17.37■□□□□ 0.37
CHL1O00533 LIMS1-204ENST00000409441 1627 ntAPPRIS ALT1 TSL 1 (best) BASIC17.37■□□□□ 0.37
CHL1O00533 FAM200A-202ENST00000449309 2480 ntAPPRIS P2 TSL 1 (best) BASIC17.37■□□□□ 0.37
CHL1O00533 MTHFSD-204ENST00000546093 2451 ntTSL 2 BASIC17.37■□□□□ 0.37
CHL1O00533 STXBP1-201ENST00000373299 3765 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
CHL1O00533 LCN6-201ENST00000341206 717 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
CHL1O00533 SNORA50D-201ENST00000408059 134 ntBASIC17.37■□□□□ 0.37
CHL1O00533 FAM126A-201ENST00000409763 616 ntTSL 2 BASIC17.37■□□□□ 0.37
CHL1O00533 AL513165.1-201ENST00000413915 289 ntTSL 3 BASIC17.37■□□□□ 0.37
CHL1O00533 AL035413.1-201ENST00000437898 507 ntTSL 2 BASIC17.37■□□□□ 0.37
CHL1O00533 GDNF-207ENST00000515058 764 ntTSL 5 BASIC17.37■□□□□ 0.37
CHL1O00533 FAM213AP2-201ENST00000521579 683 ntBASIC17.37■□□□□ 0.37
CHL1O00533 IGHVII-33-1-201ENST00000524010 280 ntBASIC17.37■□□□□ 0.37
CHL1O00533 FXYD6-FXYD2-201ENST00000532984 670 ntTSL 3 BASIC17.37■□□□□ 0.37
CHL1O00533 CYB561A3-208ENST00000536915 1094 ntAPPRIS P1 TSL 2 BASIC17.37■□□□□ 0.37
CHL1O00533 PRB3-202ENST00000538488 1283 ntAPPRIS P5 TSL 5 BASIC17.37■□□□□ 0.37
CHL1O00533 AL031705.1-201ENST00000566922 682 ntTSL 3 BASIC17.37■□□□□ 0.37
CHL1O00533 AL022344.2-201ENST00000568976 968 ntBASIC17.37■□□□□ 0.37
CHL1O00533 RN7SL605P-201ENST00000577229 281 ntBASIC17.37■□□□□ 0.37
CHL1O00533 MIR5091-201ENST00000578707 93 ntBASIC17.37■□□□□ 0.37
CHL1O00533 KLKP1-202ENST00000597246 1125 ntTSL 1 (best) BASIC17.37■□□□□ 0.37
CHL1O00533 AC017033.1-201ENST00000603720 708 ntTSL 2 BASIC17.37■□□□□ 0.37
CHL1O00533 SNORA50D-202ENST00000627561 132 ntBASIC17.37■□□□□ 0.37
CHL1O00533 ATG9B-203ENST00000469530 3489 ntAPPRIS P1 TSL 5 BASIC17.37■□□□□ 0.37
CHL1O00533 XRRA1-202ENST00000340360 5681 ntAPPRIS P1 TSL 5 BASIC17.37■□□□□ 0.37
CHL1O00533 PHTF1-203ENST00000369600 3075 ntTSL 5 BASIC17.37■□□□□ 0.37
CHL1O00533 COL17A1-201ENST00000353479 5734 ntAPPRIS P2 TSL 1 (best) BASIC17.37■□□□□ 0.37
CHL1O00533 ZFAND1-201ENST00000220669 1798 ntAPPRIS P3 TSL 1 (best) BASIC17.37■□□□□ 0.37
CHL1O00533 SLC7A8-205ENST00000453702 1752 ntTSL 1 (best) BASIC17.37■□□□□ 0.37
CHL1O00533 ZFAND1-221ENST00000523096 1778 ntAPPRIS ALT1 TSL 1 (best) BASIC17.37■□□□□ 0.37
CHL1O00533 DAGLA-201ENST00000257215 5757 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
CHL1O00533 AC005154.3-201ENST00000419639 1393 ntBASIC17.37■□□□□ 0.37
CHL1O00533 C1R-202ENST00000536053 2347 ntTSL 2 BASIC17.37■□□□□ 0.37
CHL1O00533 EFHB-202ENST00000344838 2389 ntAPPRIS ALT2 TSL 2 BASIC17.37■□□□□ 0.37
CHL1O00533 PML-203ENST00000354026 2885 ntAPPRIS ALT2 TSL 1 (best) BASIC17.37■□□□□ 0.37
CHL1O00533 SYNRG-231ENST00000622045 3859 ntAPPRIS ALT2 TSL 1 (best) BASIC17.37■□□□□ 0.37
CHL1O00533 KCTD3-201ENST00000259154 3931 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
CHL1O00533 SLC26A6-213ENST00000455886 2460 ntTSL 2 BASIC17.37■□□□□ 0.37
CHL1O00533 PLCD1-204ENST00000463876 2963 ntAPPRIS ALT1 TSL 2 BASIC17.37■□□□□ 0.37
CHL1O00533 IL20RA-201ENST00000316649 3485 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
CHL1O00533 SEMA5B-206ENST00000451055 4579 ntAPPRIS ALT2 TSL 2 BASIC17.37■□□□□ 0.37
CHL1O00533 BRSK2-202ENST00000382179 3576 ntTSL 2 BASIC17.37■□□□□ 0.37
CHL1O00533 PLEKHO2-202ENST00000616065 3569 ntTSL 1 (best) BASIC17.37■□□□□ 0.37
CHL1O00533 SUV39H2-201ENST00000313519 3087 ntAPPRIS P3 TSL 1 (best) BASIC17.36■□□□□ 0.37
CHL1O00533 TUBB2A-201ENST00000333628 1595 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
CHL1O00533 TTBK1-201ENST00000259750 6932 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
CHL1O00533 ADAMTS18-201ENST00000282849 5913 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
CHL1O00533 DDX11L1-202ENST00000456328 1657 ntTSL 1 (best) BASIC17.36■□□□□ 0.37
CHL1O00533 DDX11L10-202ENST00000513886 1652 ntTSL 1 (best) BASIC17.36■□□□□ 0.37
CHL1O00533 DDX11L9-203ENST00000562189 1652 ntTSL 1 (best) BASIC17.36■□□□□ 0.37
CHL1O00533 SLC4A8-205ENST00000535225 2262 ntTSL 2 BASIC17.36■□□□□ 0.37
CHL1O00533 BAIAP3-202ENST00000397488 4583 ntTSL 1 (best) BASIC17.36■□□□□ 0.37
CHL1O00533 MYD88-201ENST00000396334 2850 ntAPPRIS P3 TSL 1 (best) BASIC17.36■□□□□ 0.37
CHL1O00533 MYD88-203ENST00000417037 2871 ntAPPRIS ALT2 TSL 1 (best) BASIC17.36■□□□□ 0.37
CHL1O00533 DCAF5-209ENST00000557386 2883 ntAPPRIS ALT1 TSL 1 (best) BASIC17.36■□□□□ 0.37
CHL1O00533 NAMA-207ENST00000605707 1748 ntTSL 1 (best) BASIC17.36■□□□□ 0.37
CHL1O00533 ZFP28-204ENST00000591844 3475 ntTSL 1 (best) BASIC17.36■□□□□ 0.37
CHL1O00533 DISC1-209ENST00000439617 7059 ntAPPRIS ALT2 TSL 5 BASIC17.36■□□□□ 0.37
CHL1O00533 KCNK9-201ENST00000303015 1245 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
CHL1O00533 LMO1-201ENST00000335790 1279 ntAPPRIS P3 TSL 1 (best) BASIC17.36■□□□□ 0.37
CHL1O00533 RN7SKP255-201ENST00000363442 313 ntBASIC17.36■□□□□ 0.37
CHL1O00533 RN7SKP203-201ENST00000363618 332 ntBASIC17.36■□□□□ 0.37
CHL1O00533 RN7SKP71-201ENST00000364558 318 ntBASIC17.36■□□□□ 0.37
CHL1O00533 7SK.1-201ENST00000365328 331 ntBASIC17.36■□□□□ 0.37
CHL1O00533 COX20P1-201ENST00000366529 357 ntBASIC17.36■□□□□ 0.37
CHL1O00533 UBIAD1-201ENST00000376804 825 ntTSL 2 BASIC17.36■□□□□ 0.37
CHL1O00533 PGAM1P11-201ENST00000416729 680 ntBASIC17.36■□□□□ 0.37
CHL1O00533 AC093609.1-201ENST00000434020 952 ntTSL 2 BASIC17.36■□□□□ 0.37
CHL1O00533 AL136084.1-201ENST00000449172 318 ntBASIC17.36■□□□□ 0.37
CHL1O00533 IL2RG-204ENST00000456850 540 ntTSL 1 (best) BASIC17.36■□□□□ 0.37
CHL1O00533 AC104964.1-201ENST00000520494 489 ntTSL 2 BASIC17.36■□□□□ 0.37
CHL1O00533 SLC25A51P3-201ENST00000521814 889 ntBASIC17.36■□□□□ 0.37
CHL1O00533 BANF1-205ENST00000527348 670 ntAPPRIS P1 TSL 3 BASIC17.36■□□□□ 0.37
CHL1O00533 LMO1-204ENST00000534484 770 ntAPPRIS ALT1 TSL 5 BASIC17.36■□□□□ 0.37
CHL1O00533 AL136295.3-201ENST00000558325 850 ntAPPRIS P1 TSL 5 BASIC17.36■□□□□ 0.37
CHL1O00533 AC130456.3-201ENST00000561762 633 ntTSL 3 BASIC17.36■□□□□ 0.37
CHL1O00533 AC091304.3-201ENST00000566500 716 ntBASIC17.36■□□□□ 0.37
CHL1O00533 AC079336.3-201ENST00000577227 475 ntTSL 3 BASIC17.36■□□□□ 0.37
CHL1O00533 KRT8P34-201ENST00000577607 1044 ntBASIC17.36■□□□□ 0.37
CHL1O00533 APOC1-209ENST00000592885 562 ntTSL 3 BASIC17.36■□□□□ 0.37
CHL1O00533 AC026304.1-201ENST00000597953 561 ntBASIC17.36■□□□□ 0.37
CHL1O00533 RPS5-204ENST00000598098 536 ntTSL 2 BASIC17.36■□□□□ 0.37
CHL1O00533 AC006548.2-201ENST00000605217 529 ntBASIC17.36■□□□□ 0.37
CHL1O00533 POLN-210ENST00000511885 3253 ntAPPRIS P1 TSL 5 BASIC17.36■□□□□ 0.37
CHL1O00533 PSMC4-202ENST00000455878 1333 ntTSL 1 (best) BASIC17.36■□□□□ 0.37
CHL1O00533 SIGLEC6-204ENST00000391797 1391 ntTSL 1 (best) BASIC17.36■□□□□ 0.37
CHL1O00533 LMAN1-201ENST00000251047 5521 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
CHL1O00533 ZNF485-202ENST00000374435 2052 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
CHL1O00533 PSMC5-212ENST00000581882 1474 ntTSL 5 BASIC17.36■□□□□ 0.37
CHL1O00533 PKN1-202ENST00000342216 2960 ntTSL 2 BASIC17.36■□□□□ 0.37
CHL1O00533 AC241585.2-201ENST00000578899 2307 ntTSL 1 (best) BASIC17.36■□□□□ 0.37
CHL1O00533 ANKMY1-204ENST00000391987 3221 ntTSL 5 BASIC17.36■□□□□ 0.37
Retrieved 100 of 98,524 protein–RNA pairs in 47.7 ms