Protein–RNA interactions for Protein: C9JG80

NPIPB4, Nuclear pore complex-interacting protein family member B4, humanhuman

Predictions only

Length 1,138 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NPIPB4C9JG80 DDX12P-201ENST00000432996 2947 ntBASIC12.11□□□□□ -0.47
NPIPB4C9JG80 PRR34-201ENST00000396008 2817 ntAPPRIS P1 TSL 1 (best) BASIC12.11□□□□□ -0.47
NPIPB4C9JG80 YWHAQ-202ENST00000381844 2216 ntAPPRIS P1 TSL 1 (best) BASIC12.11□□□□□ -0.47
NPIPB4C9JG80 TNS2-202ENST00000314276 4944 ntAPPRIS P4 TSL 1 (best) BASIC12.11□□□□□ -0.47
NPIPB4C9JG80 MAN2B1-203ENST00000456935 3184 ntAPPRIS P3 TSL 1 (best) BASIC12.11□□□□□ -0.47
NPIPB4C9JG80 RBM4B-201ENST00000310046 1840 ntAPPRIS P1 TSL 1 (best) BASIC12.11□□□□□ -0.47
NPIPB4C9JG80 NXPE3-201ENST00000273347 3941 ntAPPRIS P1 TSL 1 (best) BASIC12.11□□□□□ -0.47
NPIPB4C9JG80 SERPINA1-205ENST00000404814 1628 ntAPPRIS P1 TSL 1 (best) BASIC12.11□□□□□ -0.47
NPIPB4C9JG80 PTPA-205ENST00000357197 2653 ntTSL 2 BASIC12.11□□□□□ -0.47
NPIPB4C9JG80 STEAP2-201ENST00000287908 6873 ntAPPRIS P1 TSL 1 (best) BASIC12.11□□□□□ -0.47
NPIPB4C9JG80 B3GAT1-203ENST00000524765 5737 ntAPPRIS P1 TSL 2 BASIC12.11□□□□□ -0.47
NPIPB4C9JG80 AC036108.2-201ENST00000566974 2562 ntTSL 2 BASIC12.11□□□□□ -0.47
NPIPB4C9JG80 B3GAT1-202ENST00000392580 3522 ntAPPRIS P1 TSL 1 (best) BASIC12.11□□□□□ -0.47
NPIPB4C9JG80 BRSK2-207ENST00000528710 3528 ntTSL 2 BASIC12.11□□□□□ -0.47
NPIPB4C9JG80 HMGA2-204ENST00000403681 4473 ntAPPRIS P3 TSL 1 (best) BASIC12.11□□□□□ -0.47
NPIPB4C9JG80 LINC02347-203ENST00000540774 1442 ntTSL 5 BASIC12.11□□□□□ -0.47
NPIPB4C9JG80 AC092115.1-201ENST00000566277 1402 ntBASIC12.11□□□□□ -0.47
NPIPB4C9JG80 AC007431.1-201ENST00000578662 1412 ntTSL 1 (best) BASIC12.11□□□□□ -0.47
NPIPB4C9JG80 UBXN11-207ENST00000374223 1312 ntTSL 1 (best) BASIC12.11□□□□□ -0.47
NPIPB4C9JG80 AC097374.1-201ENST00000568768 6624 ntTSL 1 (best) BASIC12.11□□□□□ -0.47
NPIPB4C9JG80 DNM2-204ENST00000408974 3013 ntAPPRIS ALT1 TSL 2 BASIC12.11□□□□□ -0.47
NPIPB4C9JG80 PHF2-203ENST00000610682 2921 ntTSL 5 BASIC12.1□□□□□ -0.47
NPIPB4C9JG80 AL022323.5-201ENST00000624101 2059 ntBASIC12.1□□□□□ -0.47
NPIPB4C9JG80 CAND2-201ENST00000295989 4429 ntTSL 1 (best) BASIC12.1□□□□□ -0.47
NPIPB4C9JG80 SULT2A1-201ENST00000222002 1987 ntAPPRIS P1 TSL 1 (best) BASIC12.1□□□□□ -0.47
NPIPB4C9JG80 MINDY1-207ENST00000622754 2637 ntAPPRIS P1 TSL 1 (best) BASIC12.1□□□□□ -0.47
NPIPB4C9JG80 SERTAD2-201ENST00000313349 5549 ntAPPRIS P1 TSL 1 (best) BASIC12.1□□□□□ -0.47
NPIPB4C9JG80 ANXA11-201ENST00000265447 2526 ntAPPRIS ALT2 TSL 5 BASIC12.1□□□□□ -0.47
NPIPB4C9JG80 MAP3K21-202ENST00000366623 3910 ntAPPRIS ALT2 TSL 1 (best) BASIC12.1□□□□□ -0.47
NPIPB4C9JG80 TRNAU1AP-201ENST00000373830 1799 ntAPPRIS P1 TSL 1 (best) BASIC12.1□□□□□ -0.47
NPIPB4C9JG80 DDX19B-208ENST00000563392 1760 ntTSL 1 (best) BASIC12.1□□□□□ -0.47
NPIPB4C9JG80 ARHGEF9-220ENST00000635729 1761 ntTSL 5 BASIC12.1□□□□□ -0.47
NPIPB4C9JG80 BIVM-202ENST00000448849 3198 ntTSL 1 (best) BASIC12.1□□□□□ -0.47
NPIPB4C9JG80 CASC10-201ENST00000377113 3801 ntAPPRIS P1 TSL 1 (best) BASIC12.1□□□□□ -0.47
NPIPB4C9JG80 LINC00910-206ENST00000592135 2438 ntTSL 1 (best) BASIC12.1□□□□□ -0.47
NPIPB4C9JG80 SF1-202ENST00000334944 3094 ntTSL 1 (best) BASIC12.1□□□□□ -0.47
NPIPB4C9JG80 RC3H2-201ENST00000335387 3081 ntTSL 1 (best) BASIC12.1□□□□□ -0.47
NPIPB4C9JG80 PCDH8-201ENST00000338862 3708 ntAPPRIS ALT1 TSL 1 (best) BASIC12.1□□□□□ -0.47
NPIPB4C9JG80 CNBP-201ENST00000422453 1664 ntAPPRIS P3 TSL 1 (best) BASIC12.1□□□□□ -0.47
NPIPB4C9JG80 OSBPL5-201ENST00000263650 3889 ntAPPRIS P1 TSL 1 (best) BASIC12.1□□□□□ -0.47
NPIPB4C9JG80 AC005562.1-201ENST00000583030 3219 ntBASIC12.1□□□□□ -0.47
NPIPB4C9JG80 ADAR-202ENST00000368474 6625 ntAPPRIS P3 TSL 1 (best) BASIC12.1□□□□□ -0.47
NPIPB4C9JG80 MARS-201ENST00000262027 2905 ntAPPRIS P1 TSL 1 (best) BASIC12.1□□□□□ -0.47
NPIPB4C9JG80 POMT1-201ENST00000341012 2912 ntTSL 2 BASIC12.1□□□□□ -0.47
NPIPB4C9JG80 PIK3R5-219ENST00000616147 4377 ntTSL 5 BASIC12.1□□□□□ -0.47
NPIPB4C9JG80 SNHG17-201ENST00000413755 648 ntTSL 3 BASIC12.1□□□□□ -0.47
NPIPB4C9JG80 AC103563.1-201ENST00000429316 123 ntBASIC12.1□□□□□ -0.47
NPIPB4C9JG80 AL590617.2-201ENST00000432673 917 ntTSL 3 BASIC12.1□□□□□ -0.47
NPIPB4C9JG80 AC019118.1-201ENST00000454530 435 ntTSL 3 BASIC12.1□□□□□ -0.47
NPIPB4C9JG80 AL390961.2-201ENST00000454991 472 ntTSL 3 BASIC12.1□□□□□ -0.47
NPIPB4C9JG80 LINC02062-201ENST00000513175 478 ntTSL 3 BASIC12.1□□□□□ -0.47
NPIPB4C9JG80 ANXA5-210ENST00000515017 1190 ntTSL 5 BASIC12.1□□□□□ -0.47
NPIPB4C9JG80 EIF3M-203ENST00000524896 1207 ntTSL 2 BASIC12.1□□□□□ -0.47
NPIPB4C9JG80 PLEKHA8P1-203ENST00000545609 277 ntTSL 3 BASIC12.1□□□□□ -0.47
NPIPB4C9JG80 AL845331.2-201ENST00000561882 1044 ntAPPRIS P1 TSL 5 BASIC12.1□□□□□ -0.47
NPIPB4C9JG80 FGFR3P5-201ENST00000564496 886 ntBASIC12.1□□□□□ -0.47
NPIPB4C9JG80 AC097724.1-201ENST00000609581 426 ntBASIC12.1□□□□□ -0.47
NPIPB4C9JG80 CTNNB1-202ENST00000396183 3268 ntAPPRIS P1 TSL 1 (best) BASIC12.1□□□□□ -0.47
NPIPB4C9JG80 RNF43-205ENST00000581868 2610 ntTSL 2 BASIC12.1□□□□□ -0.47
NPIPB4C9JG80 FOSB-212ENST00000592811 3089 ntTSL 2 BASIC12.1□□□□□ -0.47
NPIPB4C9JG80 PAM-207ENST00000455264 2898 ntTSL 1 (best) BASIC12.1□□□□□ -0.47
NPIPB4C9JG80 ART3-201ENST00000341029 1517 ntAPPRIS ALT2 TSL 1 (best) BASIC12.1□□□□□ -0.47
NPIPB4C9JG80 CBLB-204ENST00000405772 3237 ntTSL 2 BASIC12.1□□□□□ -0.47
NPIPB4C9JG80 ZNF202-207ENST00000530393 3564 ntAPPRIS P1 TSL 1 (best) BASIC12.1□□□□□ -0.47
NPIPB4C9JG80 PCMTD1-201ENST00000360540 4252 ntAPPRIS P1 TSL 5 BASIC12.1□□□□□ -0.47
NPIPB4C9JG80 LINC00563-201ENST00000566370 1400 ntBASIC12.1□□□□□ -0.47
NPIPB4C9JG80 Z97653.2-201ENST00000623057 1418 ntBASIC12.1□□□□□ -0.47
NPIPB4C9JG80 GK-205ENST00000378946 3638 ntTSL 1 (best) BASIC12.1□□□□□ -0.47
NPIPB4C9JG80 UQCC2-204ENST00000607484 1314 ntAPPRIS P1 TSL 1 (best) BASIC12.1□□□□□ -0.47
NPIPB4C9JG80 LRRFIP2-202ENST00000354379 2821 ntAPPRIS P1 TSL 1 (best) BASIC12.1□□□□□ -0.47
NPIPB4C9JG80 WASHC2C-201ENST00000336378 4669 ntAPPRIS ALT2 TSL 5 BASIC12.1□□□□□ -0.47
NPIPB4C9JG80 MKRN2-203ENST00000448482 1679 ntTSL 5 BASIC12.1□□□□□ -0.47
NPIPB4C9JG80 ALDOA-213ENST00000564595 1663 ntTSL 2 BASIC12.1□□□□□ -0.47
NPIPB4C9JG80 CTR9-201ENST00000361367 4586 ntAPPRIS P1 TSL 1 (best) BASIC12.1□□□□□ -0.47
NPIPB4C9JG80 ABCG2-201ENST00000237612 4479 ntAPPRIS P1 TSL 1 (best) BASIC12.09□□□□□ -0.47
NPIPB4C9JG80 PPM1K-201ENST00000295908 1940 ntTSL 5 BASIC12.09□□□□□ -0.47
NPIPB4C9JG80 CDC42-202ENST00000344548 2256 ntAPPRIS ALT1 TSL 1 (best) BASIC12.09□□□□□ -0.47
NPIPB4C9JG80 AP003969.2-201ENST00000623739 2275 ntBASIC12.09□□□□□ -0.47
NPIPB4C9JG80 MRRF-201ENST00000297908 1841 ntTSL 2 BASIC12.09□□□□□ -0.47
NPIPB4C9JG80 PIGG-217ENST00000509768 3121 ntTSL 1 (best) BASIC12.09□□□□□ -0.47
NPIPB4C9JG80 CFLAR-206ENST00000395148 4415 ntTSL 1 (best) BASIC12.09□□□□□ -0.47
NPIPB4C9JG80 PSIP1-203ENST00000380733 3391 ntAPPRIS P1 TSL 1 (best) BASIC12.09□□□□□ -0.47
NPIPB4C9JG80 RSBN1-204ENST00000612242 6592 ntAPPRIS P1 TSL 2 BASIC12.09□□□□□ -0.47
NPIPB4C9JG80 NLGN3-201ENST00000358741 3046 ntAPPRIS P4 TSL 5 BASIC12.09□□□□□ -0.47
NPIPB4C9JG80 IL11RA-208ENST00000555003 3008 ntAPPRIS P1 TSL 2 BASIC12.09□□□□□ -0.47
NPIPB4C9JG80 SLC25A29-208ENST00000554912 5169 ntTSL 1 (best) BASIC12.09□□□□□ -0.47
NPIPB4C9JG80 TBCE-201ENST00000366601 1966 ntAPPRIS P3 TSL 1 (best) BASIC12.09□□□□□ -0.47
NPIPB4C9JG80 ARFGAP1-212ENST00000519604 3191 ntTSL 2 BASIC12.09□□□□□ -0.47
NPIPB4C9JG80 FAM156A-221ENST00000622447 3757 ntAPPRIS P2 TSL 1 (best) BASIC12.09□□□□□ -0.47
NPIPB4C9JG80 POLD1-210ENST00000599857 3435 ntAPPRIS P1 TSL 1 (best) BASIC12.09□□□□□ -0.47
NPIPB4C9JG80 CBR4-202ENST00000504480 1602 ntTSL 2 BASIC12.09□□□□□ -0.47
NPIPB4C9JG80 DRD2-210ENST00000544518 2473 ntAPPRIS ALT1 TSL 1 (best) BASIC12.09□□□□□ -0.47
NPIPB4C9JG80 NACC2-202ENST00000371753 6802 ntAPPRIS P1 TSL 1 (best) BASIC12.09□□□□□ -0.47
NPIPB4C9JG80 EGR2-201ENST00000242480 2968 ntAPPRIS P1 TSL 1 (best) BASIC12.09□□□□□ -0.47
NPIPB4C9JG80 THOC6-201ENST00000253952 1246 ntTSL 2 BASIC12.09□□□□□ -0.47
NPIPB4C9JG80 PPIE-202ENST00000356511 1079 ntTSL 1 (best) BASIC12.09□□□□□ -0.47
NPIPB4C9JG80 MBD3L4-201ENST00000381394 775 ntAPPRIS P1 TSL 1 (best) BASIC12.09□□□□□ -0.47
NPIPB4C9JG80 Z82214.1-201ENST00000419643 988 ntTSL 3 BASIC12.09□□□□□ -0.47
NPIPB4C9JG80 DLEU2-205ENST00000443587 705 ntTSL 5 BASIC12.09□□□□□ -0.47
NPIPB4C9JG80 RGS5-216ENST00000449680 788 ntTSL 3 BASIC12.09□□□□□ -0.47
Retrieved 100 of 98,524 protein–RNA pairs in 46.1 ms