Protein–RNA interactions for Protein: Q9NUP7

TRMT13, tRNA:m(4)X modification enzyme TRM13 homolog, humanhuman

Known RBP Predictions only

Length 481 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRMT13Q9NUP7 LPAR5-201ENST00000329858 3171 ntAPPRIS P1 TSL 1 (best) BASIC14.91□□□□□ -0.02
TRMT13Q9NUP7 CHD4-201ENST00000357008 6496 ntAPPRIS P3 TSL 1 (best) BASIC14.91□□□□□ -0.02
TRMT13Q9NUP7 ZIK1-201ENST00000307468 2510 ntTSL 1 (best) BASIC14.91□□□□□ -0.02
TRMT13Q9NUP7 HNF4A-206ENST00000457232 1339 ntTSL 1 (best) BASIC14.91□□□□□ -0.02
TRMT13Q9NUP7 CCDC22-201ENST00000376227 2319 ntAPPRIS P1 TSL 1 (best) BASIC14.91□□□□□ -0.02
TRMT13Q9NUP7 SGK3-208ENST00000521198 3306 ntAPPRIS P1 TSL 1 (best) BASIC14.91□□□□□ -0.02
TRMT13Q9NUP7 PGAP2-204ENST00000396991 1798 ntTSL 5 BASIC14.9□□□□□ -0.02
TRMT13Q9NUP7 SETMAR-205ENST00000425863 1657 ntTSL 2 BASIC14.9□□□□□ -0.02
TRMT13Q9NUP7 AC099548.2-204ENST00000481651 2106 ntTSL 1 (best) BASIC14.9□□□□□ -0.02
TRMT13Q9NUP7 IMPDH1-203ENST00000354269 2580 ntTSL 2 BASIC14.9□□□□□ -0.02
TRMT13Q9NUP7 OR2I1P-209ENST00000641730 5365 ntBASIC14.9□□□□□ -0.02
TRMT13Q9NUP7 ELN-208ENST00000380575 3043 ntAPPRIS ALT2 TSL 1 (best) BASIC14.9□□□□□ -0.02
TRMT13Q9NUP7 ERG-211ENST00000453032 1595 ntTSL 2 BASIC14.9□□□□□ -0.02
TRMT13Q9NUP7 PI4K2A-201ENST00000370631 4189 ntAPPRIS P1 TSL 1 (best) BASIC14.9□□□□□ -0.02
TRMT13Q9NUP7 PXK-210ENST00000479241 2817 ntTSL 2 BASIC14.9□□□□□ -0.02
TRMT13Q9NUP7 CCDC183-AS1-201ENST00000414656 2386 ntTSL 2 BASIC14.9□□□□□ -0.02
TRMT13Q9NUP7 AC092535.1-201ENST00000417557 2165 ntTSL 2 BASIC14.9□□□□□ -0.02
TRMT13Q9NUP7 TP63-206ENST00000392463 1386 ntTSL 1 (best) BASIC14.9□□□□□ -0.02
TRMT13Q9NUP7 KRT20-201ENST00000167588 1737 ntAPPRIS P1 TSL 1 (best) BASIC14.9□□□□□ -0.02
TRMT13Q9NUP7 SRSF8-201ENST00000587424 4028 ntAPPRIS P1 BASIC14.9□□□□□ -0.02
TRMT13Q9NUP7 AP000437.1-201ENST00000624057 2085 ntBASIC14.9□□□□□ -0.02
TRMT13Q9NUP7 FXYD2-202ENST00000292079 571 ntTSL 1 (best) BASIC14.9□□□□□ -0.02
TRMT13Q9NUP7 INO80C-202ENST00000334598 974 ntAPPRIS P1 TSL 1 (best) BASIC14.9□□□□□ -0.02
TRMT13Q9NUP7 NR1I3-201ENST00000367979 1074 ntTSL 1 (best) BASIC14.9□□□□□ -0.02
TRMT13Q9NUP7 NR1I3-207ENST00000367985 1074 ntTSL 1 (best) BASIC14.9□□□□□ -0.02
TRMT13Q9NUP7 FAM213A-204ENST00000372188 829 ntAPPRIS P1 TSL 2 BASIC14.9□□□□□ -0.02
TRMT13Q9NUP7 PLA2G2E-201ENST00000375116 785 ntAPPRIS P1 TSL 1 (best) BASIC14.9□□□□□ -0.02
TRMT13Q9NUP7 PPIL3-205ENST00000409449 756 ntTSL 5 BASIC14.9□□□□□ -0.02
TRMT13Q9NUP7 FTH1P18-201ENST00000412071 549 ntBASIC14.9□□□□□ -0.02
TRMT13Q9NUP7 AC004969.1-201ENST00000471553 578 ntTSL 5 BASIC14.9□□□□□ -0.02
TRMT13Q9NUP7 RN7SL838P-201ENST00000481676 295 ntBASIC14.9□□□□□ -0.02
TRMT13Q9NUP7 NR1I3-225ENST00000508387 634 ntTSL 1 (best) BASIC14.9□□□□□ -0.02
TRMT13Q9NUP7 C1orf198-207ENST00000523410 1041 ntAPPRIS ALT2 TSL 2 BASIC14.9□□□□□ -0.02
TRMT13Q9NUP7 LY6E-215ENST00000523847 427 ntTSL 3 BASIC14.9□□□□□ -0.02
TRMT13Q9NUP7 AC022182.2-201ENST00000525556 859 ntTSL 2 BASIC14.9□□□□□ -0.02
TRMT13Q9NUP7 AP002495.1-205ENST00000529513 655 ntAPPRIS ALT2 TSL 3 BASIC14.9□□□□□ -0.02
TRMT13Q9NUP7 AC078878.2-201ENST00000543451 286 ntTSL 5 BASIC14.9□□□□□ -0.02
TRMT13Q9NUP7 SLC13A2-205ENST00000545060 1276 ntTSL 5 BASIC14.9□□□□□ -0.02
TRMT13Q9NUP7 AC010478.1-203ENST00000558403 532 ntTSL 4 BASIC14.9□□□□□ -0.02
TRMT13Q9NUP7 AC007610.1-201ENST00000568130 498 ntTSL 3 BASIC14.9□□□□□ -0.02
TRMT13Q9NUP7 RN7SL162P-201ENST00000579233 292 ntBASIC14.9□□□□□ -0.02
TRMT13Q9NUP7 AL162731.1-201ENST00000613248 876 ntTSL 3 BASIC14.9□□□□□ -0.02
TRMT13Q9NUP7 TMEM230-211ENST00000615008 594 ntTSL 4 BASIC14.9□□□□□ -0.02
TRMT13Q9NUP7 Metazoa_SRP.141-201ENST00000615072 282 ntBASIC14.9□□□□□ -0.02
TRMT13Q9NUP7 AC106782.5-201ENST00000616011 337 ntBASIC14.9□□□□□ -0.02
TRMT13Q9NUP7 AC008622.3-201ENST00000621170 600 ntBASIC14.9□□□□□ -0.02
TRMT13Q9NUP7 SNORA50D-202ENST00000627561 132 ntBASIC14.9□□□□□ -0.02
TRMT13Q9NUP7 AC006207.1-201ENST00000637958 562 ntTSL 5 BASIC14.9□□□□□ -0.02
TRMT13Q9NUP7 COASY-211ENST00000590958 1976 ntTSL 1 (best) BASIC14.9□□□□□ -0.02
TRMT13Q9NUP7 C1orf159-202ENST00000379320 2324 ntAPPRIS ALT2 TSL 2 BASIC14.9□□□□□ -0.02
TRMT13Q9NUP7 POU6F1-208ENST00000550824 2664 ntTSL 5 BASIC14.9□□□□□ -0.02
TRMT13Q9NUP7 TRAF7-201ENST00000326181 3700 ntAPPRIS P1 TSL 1 (best) BASIC14.9□□□□□ -0.02
TRMT13Q9NUP7 ST3GAL3-208ENST00000361392 2243 ntAPPRIS P1 TSL 1 (best) BASIC14.9□□□□□ -0.02
TRMT13Q9NUP7 IGFBP5-201ENST00000233813 6215 ntAPPRIS P1 TSL 1 (best) BASIC14.9□□□□□ -0.02
TRMT13Q9NUP7 MYH11-201ENST00000300036 6029 ntAPPRIS P3 TSL 1 (best) BASIC14.9□□□□□ -0.02
TRMT13Q9NUP7 HAO1-201ENST00000378789 1777 ntAPPRIS P1 TSL 1 (best) BASIC14.9□□□□□ -0.02
TRMT13Q9NUP7 AP1S3-206ENST00000443700 1785 ntTSL 1 (best) BASIC14.9□□□□□ -0.02
TRMT13Q9NUP7 DPYSL4-201ENST00000338492 2729 ntAPPRIS P1 TSL 1 (best) BASIC14.9□□□□□ -0.02
TRMT13Q9NUP7 AP3M2-201ENST00000174653 3661 ntAPPRIS P1 TSL 5 BASIC14.9□□□□□ -0.02
TRMT13Q9NUP7 GAL3ST4-202ENST00000411994 1404 ntTSL 2 BASIC14.9□□□□□ -0.02
TRMT13Q9NUP7 EYA4-205ENST00000430974 2364 ntTSL 2 BASIC14.9□□□□□ -0.02
TRMT13Q9NUP7 MCL1-202ENST00000369026 3932 ntAPPRIS P1 TSL 1 (best) BASIC14.9□□□□□ -0.02
TRMT13Q9NUP7 FUK-202ENST00000378912 3925 ntTSL 2 BASIC14.9□□□□□ -0.02
TRMT13Q9NUP7 IARS2-201ENST00000366922 3560 ntAPPRIS P1 TSL 1 (best) BASIC14.9□□□□□ -0.02
TRMT13Q9NUP7 IRF2BP2-201ENST00000366609 4663 ntAPPRIS P3 TSL 1 (best) BASIC14.9□□□□□ -0.02
TRMT13Q9NUP7 AC026271.1-201ENST00000447794 1348 ntBASIC14.9□□□□□ -0.02
TRMT13Q9NUP7 NRG1-211ENST00000520502 1330 ntTSL 1 (best) BASIC14.9□□□□□ -0.02
TRMT13Q9NUP7 RNF214-201ENST00000300650 2755 ntAPPRIS P1 TSL 1 (best) BASIC14.9□□□□□ -0.02
TRMT13Q9NUP7 CAMKK2-202ENST00000337174 5304 ntAPPRIS ALT2 TSL 1 (best) BASIC14.9□□□□□ -0.02
TRMT13Q9NUP7 VAPB-202ENST00000395802 1834 ntTSL 1 (best) BASIC14.89□□□□□ -0.03
TRMT13Q9NUP7 ZNF485-202ENST00000374435 2052 ntAPPRIS P1 TSL 1 (best) BASIC14.89□□□□□ -0.03
TRMT13Q9NUP7 RASGRF2-206ENST00000638442 2842 ntTSL 5 BASIC14.89□□□□□ -0.03
TRMT13Q9NUP7 POLR2E-211ENST00000612655 1749 ntAPPRIS P1 TSL 3 BASIC14.89□□□□□ -0.03
TRMT13Q9NUP7 CKAP2-202ENST00000378034 1972 ntAPPRIS ALT2 TSL 1 (best) BASIC14.89□□□□□ -0.03
TRMT13Q9NUP7 HIPK4-201ENST00000291823 2452 ntAPPRIS P1 TSL 1 (best) BASIC14.89□□□□□ -0.03
TRMT13Q9NUP7 HS6ST3-201ENST00000376705 7804 ntAPPRIS P1 TSL 1 (best) BASIC14.89□□□□□ -0.03
TRMT13Q9NUP7 HOPX-202ENST00000337881 1611 ntAPPRIS P1 TSL 1 (best) BASIC14.89□□□□□ -0.03
TRMT13Q9NUP7 BPIFB6-201ENST00000349552 1362 ntAPPRIS P1 TSL 1 (best) BASIC14.89□□□□□ -0.03
TRMT13Q9NUP7 HPGD-202ENST00000296522 3027 ntAPPRIS P1 TSL 1 (best) BASIC14.89□□□□□ -0.03
TRMT13Q9NUP7 EDEM2-201ENST00000374491 1756 ntTSL 1 (best) BASIC14.89□□□□□ -0.03
TRMT13Q9NUP7 ANXA3-202ENST00000503570 1524 ntTSL 5 BASIC14.89□□□□□ -0.03
TRMT13Q9NUP7 KLKP1-203ENST00000600104 1532 ntTSL 1 (best) BASIC14.89□□□□□ -0.03
TRMT13Q9NUP7 KDELC2-201ENST00000323468 4312 ntAPPRIS P1 TSL 1 (best) BASIC14.89□□□□□ -0.03
TRMT13Q9NUP7 CDH16-204ENST00000565796 2694 ntTSL 2 BASIC14.89□□□□□ -0.03
TRMT13Q9NUP7 S100B-201ENST00000291700 877 ntAPPRIS P1 TSL 1 (best) BASIC14.89□□□□□ -0.03
TRMT13Q9NUP7 CCL25-202ENST00000315626 450 ntTSL 2 BASIC14.89□□□□□ -0.03
TRMT13Q9NUP7 RN7SKP212-201ENST00000410851 328 ntBASIC14.89□□□□□ -0.03
TRMT13Q9NUP7 Z95624.1-201ENST00000413528 628 ntTSL 5 BASIC14.89□□□□□ -0.03
TRMT13Q9NUP7 KCNK15-AS1-202ENST00000427303 528 ntTSL 5 BASIC14.89□□□□□ -0.03
TRMT13Q9NUP7 CBR3-AS1-202ENST00000427491 741 ntTSL 1 (best) BASIC14.89□□□□□ -0.03
TRMT13Q9NUP7 AC010997.2-201ENST00000427610 260 ntTSL 3 BASIC14.89□□□□□ -0.03
TRMT13Q9NUP7 MKNK1-205ENST00000428112 1270 ntAPPRIS P3 TSL 2 BASIC14.89□□□□□ -0.03
TRMT13Q9NUP7 CIDEC-205ENST00000443115 443 ntTSL 1 (best) BASIC14.89□□□□□ -0.03
TRMT13Q9NUP7 GOLT1B-206ENST00000542038 933 ntTSL 1 (best) BASIC14.89□□□□□ -0.03
TRMT13Q9NUP7 GLIPR1L2-203ENST00000547164 509 ntTSL 5 BASIC14.89□□□□□ -0.03
TRMT13Q9NUP7 RORA-AS1-202ENST00000558140 869 ntTSL 2 BASIC14.89□□□□□ -0.03
TRMT13Q9NUP7 DTWD1-205ENST00000558653 1131 ntAPPRIS P1 TSL 3 BASIC14.89□□□□□ -0.03
TRMT13Q9NUP7 ABCC6P1-203ENST00000565566 1170 ntBASIC14.89□□□□□ -0.03
TRMT13Q9NUP7 YWHAE-212ENST00000575977 540 ntTSL 2 BASIC14.89□□□□□ -0.03
TRMT13Q9NUP7 AL356740.1-201ENST00000602192 1297 ntBASIC14.89□□□□□ -0.03
Retrieved 100 of 98,524 protein–RNA pairs in 77.3 ms