Protein–RNA interactions for Protein: Q04656

ATP7A, Copper-transporting ATPase 1, humanhuman

Predictions only

Length 1,500 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ATP7AQ04656 AC114296.1-202ENST00000638019 771 ntAPPRIS ALT2 TSL 5 BASIC19.56■□□□□ 0.72
ATP7AQ04656 CACNA1A-218ENST00000635895 8657 ntAPPRIS ALT2 TSL 5 BASIC19.56■□□□□ 0.72
ATP7AQ04656 CACNA1A-257ENST00000638009 8665 ntAPPRIS ALT2 TSL 1 (best) BASIC19.56■□□□□ 0.72
ATP7AQ04656 NBEAP3-201ENST00000420638 1493 ntBASIC19.56■□□□□ 0.72
ATP7AQ04656 CARNMT1-202ENST00000376834 4130 ntAPPRIS P1 TSL 1 (best) BASIC19.56■□□□□ 0.72
ATP7AQ04656 OAS1-201ENST00000202917 1816 ntAPPRIS ALT2 TSL 1 (best) BASIC19.56■□□□□ 0.72
ATP7AQ04656 MAGED2-207ENST00000396224 2026 ntAPPRIS P2 TSL 5 BASIC19.56■□□□□ 0.72
ATP7AQ04656 PLK2-201ENST00000274289 2960 ntAPPRIS P1 TSL 1 (best) BASIC19.56■□□□□ 0.72
ATP7AQ04656 SPC25-201ENST00000282074 1354 ntAPPRIS P1 TSL 1 (best) BASIC19.56■□□□□ 0.72
ATP7AQ04656 AC015959.1-201ENST00000623263 1377 ntBASIC19.56■□□□□ 0.72
ATP7AQ04656 ZNF133-203ENST00000377671 2701 ntAPPRIS P3 TSL 1 (best) BASIC19.56■□□□□ 0.72
ATP7AQ04656 PTCHD3-201ENST00000438700 2529 ntAPPRIS P1 TSL 1 (best) BASIC19.56■□□□□ 0.72
ATP7AQ04656 NOB1-201ENST00000268802 1734 ntAPPRIS P1 TSL 1 (best) BASIC19.56■□□□□ 0.72
ATP7AQ04656 MAP2K1-201ENST00000307102 3410 ntAPPRIS P1 TSL 1 (best) BASIC19.56■□□□□ 0.72
ATP7AQ04656 VSIG10-202ENST00000359236 4946 ntAPPRIS P1 TSL 1 (best) BASIC19.56■□□□□ 0.72
ATP7AQ04656 SIGLEC20P-201ENST00000595243 1311 ntBASIC19.56■□□□□ 0.72
ATP7AQ04656 LIMD1-202ENST00000440097 2773 ntTSL 5 BASIC19.56■□□□□ 0.72
ATP7AQ04656 CLIC6-202ENST00000360731 3860 ntAPPRIS ALT2 TSL 1 (best) BASIC19.56■□□□□ 0.72
ATP7AQ04656 MYH14-204ENST00000440075 4247 ntTSL 1 (best) BASIC19.56■□□□□ 0.72
ATP7AQ04656 OPCML-IT1-201ENST00000533859 2936 ntTSL 2 BASIC19.56■□□□□ 0.72
ATP7AQ04656 TGFA-207ENST00000450929 950 ntTSL 1 (best) BASIC19.56■□□□□ 0.72
ATP7AQ04656 TATDN3-208ENST00000526997 794 ntTSL 3 BASIC19.56■□□□□ 0.72
ATP7AQ04656 TATDN3-213ENST00000531963 1291 ntTSL 1 (best) BASIC19.56■□□□□ 0.72
ATP7AQ04656 AL138828.1-208ENST00000585946 824 ntTSL 5 BASIC19.56■□□□□ 0.72
ATP7AQ04656 KATNBL1-201ENST00000256544 2723 ntAPPRIS P1 TSL 1 (best) BASIC19.56■□□□□ 0.72
ATP7AQ04656 AL359845.1-201ENST00000458202 1648 ntBASIC19.56■□□□□ 0.72
ATP7AQ04656 VARS-215ENST00000375663 4312 ntAPPRIS P1 TSL 1 (best) BASIC19.55■□□□□ 0.72
ATP7AQ04656 KIAA1683-209ENST00000612316 2684 ntAPPRIS ALT2 TSL 5 BASIC19.55■□□□□ 0.72
ATP7AQ04656 B4GALT6-201ENST00000237019 2128 ntTSL 1 (best) BASIC19.55■□□□□ 0.72
ATP7AQ04656 ADGRG2-207ENST00000379869 4768 ntAPPRIS ALT2 TSL 1 (best) BASIC19.55■□□□□ 0.72
ATP7AQ04656 PRR26-202ENST00000441152 2251 ntAPPRIS P1 TSL 2 BASIC19.55■□□□□ 0.72
ATP7AQ04656 SLC5A11-211ENST00000569071 1919 ntTSL 5 BASIC19.55■□□□□ 0.72
ATP7AQ04656 WDR20-202ENST00000322340 3060 ntTSL 1 (best) BASIC19.55■□□□□ 0.72
ATP7AQ04656 IL9R-202ENST00000369423 2032 ntAPPRIS ALT2 TSL 1 (best) BASIC19.55■□□□□ 0.72
ATP7AQ04656 DIS3L2-205ENST00000409401 2048 ntTSL 1 (best) BASIC19.55■□□□□ 0.72
ATP7AQ04656 CASK-202ENST00000378158 3848 ntTSL 5 BASIC19.55■□□□□ 0.72
ATP7AQ04656 GPER1-202ENST00000397088 2639 ntAPPRIS P1 TSL 1 (best) BASIC19.55■□□□□ 0.72
ATP7AQ04656 FGF12-207ENST00000454309 3058 ntAPPRIS P1 TSL 1 (best) BASIC19.55■□□□□ 0.72
ATP7AQ04656 CCT8-211ENST00000540844 1927 ntTSL 2 BASIC19.55■□□□□ 0.72
ATP7AQ04656 AL391647.1-201ENST00000395664 511 ntBASIC19.55■□□□□ 0.72
ATP7AQ04656 HNRNPABP1-201ENST00000406003 734 ntBASIC19.55■□□□□ 0.72
ATP7AQ04656 AL391822.1-201ENST00000452580 562 ntBASIC19.55■□□□□ 0.72
ATP7AQ04656 SEMA6A-AS1-206ENST00000514214 782 ntTSL 3 BASIC19.55■□□□□ 0.72
ATP7AQ04656 PMM2-216ENST00000569958 698 ntTSL 2 BASIC19.55■□□□□ 0.72
ATP7AQ04656 ALOX15P2-201ENST00000340858 1897 ntBASIC19.55■□□□□ 0.72
ATP7AQ04656 NDEL1-203ENST00000402554 1858 ntTSL 5 BASIC19.55■□□□□ 0.72
ATP7AQ04656 TOX3-201ENST00000219746 3233 ntAPPRIS P4 TSL 2 BASIC19.54■□□□□ 0.72
ATP7AQ04656 MED15-204ENST00000406969 3210 ntTSL 1 (best) BASIC19.54■□□□□ 0.72
ATP7AQ04656 CPEB2-204ENST00000382401 5509 ntAPPRIS ALT2 TSL 1 (best) BASIC19.54■□□□□ 0.72
ATP7AQ04656 WIZ-201ENST00000263381 5695 ntAPPRIS P2 TSL 2 BASIC19.54■□□□□ 0.72
ATP7AQ04656 MAP4K4-204ENST00000350198 7316 ntTSL 5 BASIC19.54■□□□□ 0.72
ATP7AQ04656 NPL-205ENST00000367555 1536 ntTSL 1 (best) BASIC19.54■□□□□ 0.72
ATP7AQ04656 FOXD4L5-201ENST00000377420 3109 ntAPPRIS P1 BASIC19.54■□□□□ 0.72
ATP7AQ04656 NUP62CL-201ENST00000372466 1755 ntTSL 1 (best) BASIC19.54■□□□□ 0.72
ATP7AQ04656 KRT40-202ENST00000398486 1772 ntAPPRIS P1 TSL 1 (best) BASIC19.54■□□□□ 0.72
ATP7AQ04656 SLCO5A1-203ENST00000524945 3725 ntTSL 2 BASIC19.54■□□□□ 0.72
ATP7AQ04656 USP7-201ENST00000344836 5412 ntAPPRIS P1 TSL 1 (best) BASIC19.54■□□□□ 0.72
ATP7AQ04656 LYRM4-205ENST00000464010 1401 ntTSL 3 BASIC19.54■□□□□ 0.72
ATP7AQ04656 SYCE1-201ENST00000303903 1011 ntAPPRIS ALT2 TSL 1 (best) BASIC19.54■□□□□ 0.72
ATP7AQ04656 IGHV1-45-201ENST00000390621 411 ntAPPRIS P1 BASIC19.54■□□□□ 0.72
ATP7AQ04656 CD33-202ENST00000391796 1089 ntAPPRIS ALT2 TSL 1 (best) BASIC19.54■□□□□ 0.72
ATP7AQ04656 LINC00472-203ENST00000426635 2958 ntTSL 2 BASIC19.54■□□□□ 0.72
ATP7AQ04656 AC106748.1-201ENST00000454801 384 ntBASIC19.54■□□□□ 0.72
ATP7AQ04656 VTI1BP1-201ENST00000486325 700 ntBASIC19.54■□□□□ 0.72
ATP7AQ04656 RASGRF2-AS1-202ENST00000505694 535 ntTSL 3 BASIC19.54■□□□□ 0.72
ATP7AQ04656 AC253536.5-201ENST00000506097 347 ntBASIC19.54■□□□□ 0.72
ATP7AQ04656 SLC10A7-208ENST00000511374 869 ntTSL 1 (best) BASIC19.54■□□□□ 0.72
ATP7AQ04656 RN7SL460P-201ENST00000582806 258 ntBASIC19.54■□□□□ 0.72
ATP7AQ04656 GMIP-204ENST00000587238 2987 ntTSL 1 (best) BASIC19.54■□□□□ 0.72
ATP7AQ04656 GATA3-201ENST00000346208 2654 ntAPPRIS P3 TSL 1 (best) BASIC19.54■□□□□ 0.72
ATP7AQ04656 GUCY1B3-207ENST00000513437 2355 ntTSL 2 BASIC19.54■□□□□ 0.72
ATP7AQ04656 ILF3-203ENST00000449870 6119 ntAPPRIS ALT2 TSL 1 (best) BASIC19.54■□□□□ 0.72
ATP7AQ04656 SLC1A4-201ENST00000234256 4561 ntAPPRIS P1 TSL 1 (best) BASIC19.54■□□□□ 0.72
ATP7AQ04656 CACNB4-201ENST00000201943 1389 ntTSL 1 (best) BASIC19.54■□□□□ 0.72
ATP7AQ04656 ERGIC3-202ENST00000348547 1359 ntAPPRIS ALT1 TSL 1 (best) BASIC19.54■□□□□ 0.72
ATP7AQ04656 AC090403.1-201ENST00000584546 1352 ntTSL 2 BASIC19.54■□□□□ 0.72
ATP7AQ04656 AL139424.2-202ENST00000641335 1369 ntBASIC19.54■□□□□ 0.72
ATP7AQ04656 CNN2-202ENST00000348419 2033 ntTSL 2 BASIC19.54■□□□□ 0.72
ATP7AQ04656 AC009133.1-201ENST00000569981 2449 ntTSL 2 BASIC19.54■□□□□ 0.72
ATP7AQ04656 DDX6P2-201ENST00000619520 1455 ntBASIC19.53■□□□□ 0.72
ATP7AQ04656 KIAA0319L-201ENST00000325722 4789 ntAPPRIS P1 TSL 1 (best) BASIC19.53■□□□□ 0.72
ATP7AQ04656 JPH2-202ENST00000372980 4787 ntAPPRIS P1 TSL 5 BASIC19.53■□□□□ 0.72
ATP7AQ04656 PDZD4-202ENST00000393758 3763 ntAPPRIS ALT2 TSL 1 (best) BASIC19.53■□□□□ 0.72
ATP7AQ04656 POLR3H-202ENST00000355209 4416 ntAPPRIS P1 TSL 1 (best) BASIC19.53■□□□□ 0.72
ATP7AQ04656 RNF144A-201ENST00000320892 5743 ntAPPRIS P1 TSL 1 (best) BASIC19.53■□□□□ 0.72
ATP7AQ04656 PCDHA8-202ENST00000531613 5260 ntAPPRIS P2 TSL 1 (best) BASIC19.53■□□□□ 0.72
ATP7AQ04656 ASCC3-207ENST00000522650 2828 ntTSL 1 (best) BASIC19.53■□□□□ 0.72
ATP7AQ04656 AC023794.5-201ENST00000564380 2157 ntBASIC19.53■□□□□ 0.72
ATP7AQ04656 ALDOA-203ENST00000395248 2447 ntTSL 5 BASIC19.53■□□□□ 0.72
ATP7AQ04656 RNA5SP248-201ENST00000365602 127 ntBASIC19.53■□□□□ 0.72
ATP7AQ04656 SFTPA2-202ENST00000372327 815 ntAPPRIS P1 TSL 1 (best) BASIC19.53■□□□□ 0.72
ATP7AQ04656 AC000078.1-201ENST00000420617 682 ntBASIC19.53■□□□□ 0.72
ATP7AQ04656 AC010163.1-201ENST00000434440 520 ntTSL 2 BASIC19.53■□□□□ 0.72
ATP7AQ04656 CHCHD2P6-201ENST00000454346 447 ntBASIC19.53■□□□□ 0.72
ATP7AQ04656 STEAP2-AS1-202ENST00000478318 627 ntTSL 3 BASIC19.53■□□□□ 0.72
ATP7AQ04656 ZG16B-204ENST00000572863 716 ntAPPRIS ALT2 TSL 2 BASIC19.53■□□□□ 0.72
ATP7AQ04656 DUSP22-206ENST00000603453 804 ntTSL 4 BASIC19.53■□□□□ 0.72
ATP7AQ04656 AC245369.3-201ENST00000624687 411 ntAPPRIS P1 BASIC19.53■□□□□ 0.72
ATP7AQ04656 ASS1-203ENST00000372393 1548 ntAPPRIS P1 TSL 5 BASIC19.53■□□□□ 0.72
ATP7AQ04656 LPAR5-201ENST00000329858 3171 ntAPPRIS P1 TSL 1 (best) BASIC19.53■□□□□ 0.72
Retrieved 100 of 98,524 protein–RNA pairs in 48.2 ms