Protein–RNA interactions for Protein: P67936

TPM4, Tropomyosin alpha-4 chain, humanhuman

Predictions only

Length 248 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TPM4P67936 GGCT-205ENST00000409436 954 ntTSL 3 BASIC15.49■□□□□ 0.07
TPM4P67936 U82695.1-202ENST00000428676 700 ntTSL 2 BASIC15.49■□□□□ 0.07
TPM4P67936 TMEM247-204ENST00000434431 680 ntAPPRIS P1 TSL 5 BASIC15.49■□□□□ 0.07
TPM4P67936 AL121845.2-201ENST00000467211 252 ntAPPRIS P1 TSL 3 BASIC15.49■□□□□ 0.07
TPM4P67936 OARD1-212ENST00000482515 832 ntTSL 2 BASIC15.49■□□□□ 0.07
TPM4P67936 AC008011.2-201ENST00000538113 792 ntTSL 3 BASIC15.49■□□□□ 0.07
TPM4P67936 TGIF1-218ENST00000551402 1089 ntTSL 2 BASIC15.49■□□□□ 0.07
TPM4P67936 POLE2-203ENST00000553805 496 ntTSL 2 BASIC15.49■□□□□ 0.07
TPM4P67936 AC012568.1-201ENST00000558463 472 ntTSL 2 BASIC15.49■□□□□ 0.07
TPM4P67936 CMC2-204ENST00000562713 573 ntTSL 3 BASIC15.49■□□□□ 0.07
TPM4P67936 CMC2-209ENST00000565108 399 ntTSL 2 BASIC15.49■□□□□ 0.07
TPM4P67936 MRPS23-202ENST00000578444 580 ntTSL 2 BASIC15.49■□□□□ 0.07
TPM4P67936 PPP1R14A-203ENST00000587515 607 ntTSL 2 BASIC15.49■□□□□ 0.07
TPM4P67936 ZNF772-207ENST00000601768 482 ntTSL 3 BASIC15.49■□□□□ 0.07
TPM4P67936 AL162426.1-201ENST00000624141 743 ntBASIC15.49■□□□□ 0.07
TPM4P67936 NRXN1-233ENST00000630543 4500 ntTSL 5 BASIC15.49■□□□□ 0.07
TPM4P67936 RARS2-201ENST00000369536 1818 ntAPPRIS P1 TSL 1 (best) BASIC15.49■□□□□ 0.07
TPM4P67936 ZNF236-202ENST00000320610 7124 ntAPPRIS ALT2 TSL 1 (best) BASIC15.49■□□□□ 0.07
TPM4P67936 LINC00563-201ENST00000566370 1400 ntBASIC15.49■□□□□ 0.07
TPM4P67936 CYYR1-201ENST00000299340 3101 ntAPPRIS P1 TSL 1 (best) BASIC15.49■□□□□ 0.07
TPM4P67936 ARHGEF9-220ENST00000635729 1761 ntTSL 5 BASIC15.49■□□□□ 0.07
TPM4P67936 TFIP11-201ENST00000405938 2896 ntAPPRIS P1 TSL 5 BASIC15.49■□□□□ 0.07
TPM4P67936 MBNL1-AS1-202ENST00000608395 6585 ntTSL 2 BASIC15.49■□□□□ 0.07
TPM4P67936 SUPV3L1-201ENST00000359655 2484 ntAPPRIS P1 TSL 1 (best) BASIC15.49■□□□□ 0.07
TPM4P67936 RGMA-203ENST00000542321 3038 ntAPPRIS ALT2 TSL 1 (best) BASIC15.49■□□□□ 0.07
TPM4P67936 ADRA2B-201ENST00000620793 3371 ntAPPRIS P1 BASIC15.49■□□□□ 0.07
TPM4P67936 SERPINA13P-201ENST00000469935 1718 ntTSL 1 (best) BASIC15.48■□□□□ 0.07
TPM4P67936 ZDHHC11-201ENST00000283441 2604 ntAPPRIS P1 TSL 1 (best) BASIC15.48■□□□□ 0.07
TPM4P67936 HSPH1-204ENST00000445273 4987 ntTSL 2 BASIC15.48■□□□□ 0.07
TPM4P67936 VILL-201ENST00000283713 2970 ntAPPRIS P1 TSL 1 (best) BASIC15.48■□□□□ 0.07
TPM4P67936 BX324167.2-201ENST00000623717 3316 ntBASIC15.48■□□□□ 0.07
TPM4P67936 AL359915.2-205ENST00000418015 1529 ntTSL 2 BASIC15.48■□□□□ 0.07
TPM4P67936 HNRNPUL1-207ENST00000595018 2794 ntTSL 2 BASIC15.48■□□□□ 0.07
TPM4P67936 IL12RB1-207ENST00000600835 2901 ntAPPRIS P1 TSL 1 (best) BASIC15.48■□□□□ 0.07
TPM4P67936 RBM15-204ENST00000617047 3284 ntTSL 1 (best) BASIC15.48■□□□□ 0.07
TPM4P67936 KCNAB2-212ENST00000458166 1336 ntTSL 2 BASIC15.48■□□□□ 0.07
TPM4P67936 AL355336.1-201ENST00000451355 1676 ntTSL 2 BASIC15.48■□□□□ 0.07
TPM4P67936 HRC-201ENST00000252825 2385 ntAPPRIS P1 TSL 1 (best) BASIC15.48■□□□□ 0.07
TPM4P67936 KIAA1191-202ENST00000393725 2700 ntTSL 1 (best) BASIC15.48■□□□□ 0.07
TPM4P67936 PPP1R1B-205ENST00000579000 1466 ntTSL 5 BASIC15.48■□□□□ 0.07
TPM4P67936 SULF1-202ENST00000402687 4891 ntAPPRIS P1 TSL 1 (best) BASIC15.48■□□□□ 0.07
TPM4P67936 KIAA1549-202ENST00000440172 12379 ntAPPRIS P3 TSL 1 (best) BASIC15.48■□□□□ 0.07
TPM4P67936 MRPL32-201ENST00000223324 1035 ntAPPRIS P1 TSL 1 (best) BASIC15.48■□□□□ 0.07
TPM4P67936 TMEM40-201ENST00000264728 984 ntAPPRIS P3 TSL 2 BASIC15.48■□□□□ 0.07
TPM4P67936 IGHV4-39-201ENST00000390619 425 ntAPPRIS P1 BASIC15.48■□□□□ 0.07
TPM4P67936 CD300A-204ENST00000392625 1163 ntTSL 1 (best) BASIC15.48■□□□□ 0.07
TPM4P67936 STMN1-204ENST00000426559 948 ntTSL 1 (best) BASIC15.48■□□□□ 0.07
TPM4P67936 AC114488.1-201ENST00000435872 591 ntTSL 3 BASIC15.48■□□□□ 0.07
TPM4P67936 AL109827.1-203ENST00000541176 872 ntAPPRIS P5 TSL 2 BASIC15.48■□□□□ 0.07
TPM4P67936 AC090502.1-201ENST00000549905 748 ntTSL 1 (best) BASIC15.48■□□□□ 0.07
TPM4P67936 AC090502.1-204ENST00000551210 469 ntTSL 2 BASIC15.48■□□□□ 0.07
TPM4P67936 ATP6V1D-206ENST00000554236 888 ntTSL 5 BASIC15.48■□□□□ 0.07
TPM4P67936 AC023310.1-201ENST00000554836 735 ntBASIC15.48■□□□□ 0.07
TPM4P67936 COQ6-210ENST00000554920 649 ntTSL 3 BASIC15.48■□□□□ 0.07
TPM4P67936 AL096865.1-201ENST00000606796 927 ntBASIC15.48■□□□□ 0.07
TPM4P67936 AC244157.2-201ENST00000616239 1006 ntBASIC15.48■□□□□ 0.07
TPM4P67936 ELN-234ENST00000621115 3452 ntAPPRIS ALT2 TSL 2 BASIC15.48■□□□□ 0.07
TPM4P67936 POLL-202ENST00000339310 2289 ntTSL 1 (best) BASIC15.48■□□□□ 0.07
TPM4P67936 AOC4P-203ENST00000566825 2289 ntBASIC15.48■□□□□ 0.07
TPM4P67936 MBTD1-201ENST00000376381 1420 ntTSL 1 (best) BASIC15.48■□□□□ 0.07
TPM4P67936 ABCA2-223ENST00000614293 8146 ntTSL 5 BASIC15.48■□□□□ 0.07
TPM4P67936 PUM2-203ENST00000361078 6251 ntTSL 2 BASIC15.48■□□□□ 0.07
TPM4P67936 SLC12A6-205ENST00000458406 4425 ntTSL 1 (best) BASIC15.48■□□□□ 0.07
TPM4P67936 YTHDC1-201ENST00000344157 6232 ntAPPRIS ALT2 TSL 1 (best) BASIC15.48■□□□□ 0.07
TPM4P67936 PCDHGA12-201ENST00000252085 4747 ntAPPRIS P3 TSL 1 (best) BASIC15.48■□□□□ 0.07
TPM4P67936 H3F3B-201ENST00000254810 2705 ntAPPRIS P1 TSL 1 (best) BASIC15.48■□□□□ 0.07
TPM4P67936 BIRC5-201ENST00000301633 2711 ntTSL 1 (best) BASIC15.48■□□□□ 0.07
TPM4P67936 ZMIZ1-AS1-203ENST00000456353 2878 ntTSL 2 BASIC15.48■□□□□ 0.07
TPM4P67936 FBXL21-202ENST00000467490 1742 ntTSL 1 (best) BASIC15.48■□□□□ 0.07
TPM4P67936 ADAMTSL4-202ENST00000369038 4167 ntAPPRIS P3 TSL 1 (best) BASIC15.48■□□□□ 0.07
TPM4P67936 FLAD1-207ENST00000368433 2656 ntTSL 2 BASIC15.48■□□□□ 0.07
TPM4P67936 CUL2-210ENST00000626172 4115 ntTSL 5 BASIC15.48■□□□□ 0.07
TPM4P67936 SGSM3-201ENST00000248929 2969 ntAPPRIS P1 TSL 1 (best) BASIC15.48■□□□□ 0.07
TPM4P67936 MYRIP-203ENST00000425621 2981 ntTSL 2 BASIC15.48■□□□□ 0.07
TPM4P67936 NAGK-202ENST00000418807 2343 ntTSL 5 BASIC15.48■□□□□ 0.07
TPM4P67936 DNMT3B-206ENST00000456297 2315 ntTSL 2 BASIC15.48■□□□□ 0.07
TPM4P67936 DNAJB8-201ENST00000319153 2465 ntAPPRIS P1 TSL 1 (best) BASIC15.48■□□□□ 0.07
TPM4P67936 AC009542.1-201ENST00000412549 1810 ntTSL 2 BASIC15.47■□□□□ 0.07
TPM4P67936 UBA2-201ENST00000246548 4023 ntAPPRIS P1 TSL 1 (best) BASIC15.47■□□□□ 0.07
TPM4P67936 RBM33-203ENST00000341148 7058 ntAPPRIS ALT2 TSL 1 (best) BASIC15.47■□□□□ 0.07
TPM4P67936 PDE2A-218ENST00000540345 3027 ntTSL 1 (best) BASIC15.47■□□□□ 0.07
TPM4P67936 TMPRSS4-211ENST00000522307 1634 ntTSL 2 BASIC15.47■□□□□ 0.07
TPM4P67936 LILRB3-201ENST00000245620 2066 ntAPPRIS ALT2 TSL 1 (best) BASIC15.47■□□□□ 0.07
TPM4P67936 SLC38A7-201ENST00000219320 4392 ntAPPRIS P1 TSL 1 (best) BASIC15.47■□□□□ 0.07
TPM4P67936 HTR5A-201ENST00000287907 2912 ntAPPRIS P1 TSL 1 (best) BASIC15.47■□□□□ 0.07
TPM4P67936 ODF2L-204ENST00000370566 2155 ntAPPRIS P1 TSL 2 BASIC15.47■□□□□ 0.07
TPM4P67936 NDUFAB1P1-201ENST00000404262 460 ntBASIC15.47■□□□□ 0.07
TPM4P67936 ADAM8-201ENST00000415217 3077 ntAPPRIS ALT2 TSL 1 (best) BASIC15.47■□□□□ 0.07
TPM4P67936 AL133456.1-201ENST00000415655 577 ntTSL 4 BASIC15.47■□□□□ 0.07
TPM4P67936 LINC00686-201ENST00000435412 332 ntTSL 3 BASIC15.47■□□□□ 0.07
TPM4P67936 XBP1P1-201ENST00000436573 652 ntBASIC15.47■□□□□ 0.07
TPM4P67936 AC011742.3-201ENST00000439053 820 ntBASIC15.47■□□□□ 0.07
TPM4P67936 HEBP2-202ENST00000448741 661 ntTSL 5 BASIC15.47■□□□□ 0.07
TPM4P67936 AL157834.2-201ENST00000451737 663 ntTSL 1 (best) BASIC15.47■□□□□ 0.07
TPM4P67936 AC132803.1-201ENST00000504204 493 ntTSL 2 BASIC15.47■□□□□ 0.07
TPM4P67936 BRF2-202ENST00000520601 1192 ntTSL 3 BASIC15.47■□□□□ 0.07
TPM4P67936 CCDC25-209ENST00000522915 785 ntTSL 3 BASIC15.47■□□□□ 0.07
TPM4P67936 CACNA2D4-208ENST00000538027 952 ntTSL 5 BASIC15.47■□□□□ 0.07
TPM4P67936 EIF2B1-205ENST00000539951 848 ntTSL 5 BASIC15.47■□□□□ 0.07
TPM4P67936 AC007342.4-201ENST00000566383 584 ntTSL 4 BASIC15.47■□□□□ 0.07
Retrieved 100 of 98,524 protein–RNA pairs in 48.9 ms