Protein–RNA interactions for Protein: O60481

ZIC3, Zinc finger protein ZIC 3, humanhuman

Predictions only

Length 467 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ZIC3O60481 UVRAG-201ENST00000356136 4123 ntAPPRIS P1 TSL 1 (best) BASIC12.31□□□□□ -0.44
ZIC3O60481 KRT26-201ENST00000335552 1733 ntAPPRIS P1 TSL 1 (best) BASIC12.31□□□□□ -0.44
ZIC3O60481 PRPF18-202ENST00000378572 1717 ntAPPRIS P1 TSL 1 (best) BASIC12.31□□□□□ -0.44
ZIC3O60481 KBTBD7-201ENST00000379483 4734 ntAPPRIS P1 BASIC12.31□□□□□ -0.44
ZIC3O60481 SLC39A8-203ENST00000424970 4032 ntTSL 2 BASIC12.31□□□□□ -0.44
ZIC3O60481 ALAD-201ENST00000409155 3173 ntAPPRIS P1 TSL 1 (best) BASIC12.31□□□□□ -0.44
ZIC3O60481 ARMC7-201ENST00000245543 2126 ntAPPRIS P1 TSL 1 (best) BASIC12.31□□□□□ -0.44
ZIC3O60481 AC008040.5-201ENST00000599781 1781 ntBASIC12.31□□□□□ -0.44
ZIC3O60481 INPPL1-213ENST00000541756 4649 ntTSL 5 BASIC12.31□□□□□ -0.44
ZIC3O60481 NTNG1-208ENST00000370074 3048 ntTSL 1 (best) BASIC12.31□□□□□ -0.44
ZIC3O60481 RNF34-211ENST00000613529 1449 ntTSL 2 BASIC12.31□□□□□ -0.44
ZIC3O60481 ANKMY1-204ENST00000391987 3221 ntTSL 5 BASIC12.31□□□□□ -0.44
ZIC3O60481 STAMBP-204ENST00000409707 1649 ntAPPRIS P1 TSL 5 BASIC12.31□□□□□ -0.44
ZIC3O60481 LRRC41-208ENST00000617760 2158 ntTSL 5 BASIC12.31□□□□□ -0.44
ZIC3O60481 GTF3C6-201ENST00000329970 952 ntAPPRIS P1 TSL 1 (best) BASIC12.31□□□□□ -0.44
ZIC3O60481 LINC00028-201ENST00000435497 587 ntTSL 2 BASIC12.31□□□□□ -0.44
ZIC3O60481 AL512288.1-201ENST00000448015 491 ntTSL 5 BASIC12.31□□□□□ -0.44
ZIC3O60481 ANKRD2-204ENST00000455090 1072 ntTSL 1 (best) BASIC12.31□□□□□ -0.44
ZIC3O60481 DUXAP9-201ENST00000547220 665 ntTSL 3 BASIC12.31□□□□□ -0.44
ZIC3O60481 CRTC3-AS1-202ENST00000559531 657 ntTSL 3 BASIC12.31□□□□□ -0.44
ZIC3O60481 AC005154.1-232ENST00000582549 556 ntTSL 5 BASIC12.31□□□□□ -0.44
ZIC3O60481 AC011471.3-201ENST00000623576 402 ntBASIC12.31□□□□□ -0.44
ZIC3O60481 PCK2-208ENST00000559250 1804 ntTSL 5 BASIC12.31□□□□□ -0.44
ZIC3O60481 NFATC4-207ENST00000553469 2566 ntAPPRIS ALT2 TSL 1 (best) BASIC12.31□□□□□ -0.44
ZIC3O60481 RFX2-222ENST00000592546 2578 ntAPPRIS ALT1 TSL 2 BASIC12.31□□□□□ -0.44
ZIC3O60481 SPATA20-227ENST00000634597 2587 ntAPPRIS ALT1 TSL 5 BASIC12.31□□□□□ -0.44
ZIC3O60481 KIAA0319-204ENST00000537886 6622 ntAPPRIS ALT2 TSL 1 (best) BASIC12.31□□□□□ -0.44
ZIC3O60481 TRMT10B-202ENST00000377753 2027 ntTSL 2 BASIC12.31□□□□□ -0.44
ZIC3O60481 DDX19B-202ENST00000355992 1692 ntTSL 1 (best) BASIC12.31□□□□□ -0.44
ZIC3O60481 CHRNB4-201ENST00000261751 2623 ntAPPRIS P1 TSL 1 (best) BASIC12.31□□□□□ -0.44
ZIC3O60481 CICP4-201ENST00000447359 2812 ntBASIC12.31□□□□□ -0.44
ZIC3O60481 MSH2-206ENST00000543555 3024 ntTSL 2 BASIC12.31□□□□□ -0.44
ZIC3O60481 DNAJC14-203ENST00000357606 3416 ntAPPRIS P1 TSL 5 BASIC12.31□□□□□ -0.44
ZIC3O60481 LILRA1-201ENST00000251372 1910 ntAPPRIS P1 TSL 1 (best) BASIC12.31□□□□□ -0.44
ZIC3O60481 PRSS16-203ENST00000421826 1949 ntTSL 2 BASIC12.31□□□□□ -0.44
ZIC3O60481 PAPOLA-223ENST00000557320 3264 ntTSL 1 (best) BASIC12.31□□□□□ -0.44
ZIC3O60481 GFI1B-202ENST00000372122 1797 ntAPPRIS P1 TSL 1 (best) BASIC12.3□□□□□ -0.44
ZIC3O60481 MRPL17-201ENST00000288937 1969 ntAPPRIS P1 TSL 1 (best) BASIC12.3□□□□□ -0.44
ZIC3O60481 DLGAP1-AS1-201ENST00000317114 1966 ntTSL 1 (best) BASIC12.3□□□□□ -0.44
ZIC3O60481 AC007336.3-201ENST00000623886 2160 ntBASIC12.3□□□□□ -0.44
ZIC3O60481 MIER1-202ENST00000355977 3595 ntTSL 5 BASIC12.3□□□□□ -0.44
ZIC3O60481 RSBN1-201ENST00000261441 6621 ntAPPRIS P1 TSL 2 BASIC12.3□□□□□ -0.44
ZIC3O60481 DEK-202ENST00000397239 3427 ntAPPRIS P1 TSL 1 (best) BASIC12.3□□□□□ -0.44
ZIC3O60481 SLC29A4-201ENST00000297195 2839 ntAPPRIS P1 TSL 1 (best) BASIC12.3□□□□□ -0.44
ZIC3O60481 SLC25A18-201ENST00000327451 2244 ntAPPRIS P1 TSL 1 (best) BASIC12.3□□□□□ -0.44
ZIC3O60481 ZNF277-201ENST00000361822 1849 ntAPPRIS P1 TSL 1 (best) BASIC12.3□□□□□ -0.44
ZIC3O60481 LINC02021-201ENST00000504808 1608 ntTSL 3 BASIC12.3□□□□□ -0.44
ZIC3O60481 INF2-203ENST00000392634 4672 ntAPPRIS P3 TSL 5 BASIC12.3□□□□□ -0.44
ZIC3O60481 ZNF655-212ENST00000424881 4666 ntAPPRIS ALT2 TSL 2 BASIC12.3□□□□□ -0.44
ZIC3O60481 AC007431.1-201ENST00000578662 1412 ntTSL 1 (best) BASIC12.3□□□□□ -0.44
ZIC3O60481 MFSD2B-201ENST00000338315 2850 ntAPPRIS ALT2 TSL 5 BASIC12.3□□□□□ -0.44
ZIC3O60481 BNIP3-201ENST00000368636 2861 ntAPPRIS P1 TSL 1 (best) BASIC12.3□□□□□ -0.44
ZIC3O60481 TMPRSS9-201ENST00000332578 3331 ntAPPRIS P1 TSL 1 (best) BASIC12.3□□□□□ -0.44
ZIC3O60481 C1QTNF9-202ENST00000382071 1854 ntAPPRIS P1 TSL 5 BASIC12.3□□□□□ -0.44
ZIC3O60481 TPM3P9-201ENST00000424846 2920 ntTSL 1 (best) BASIC12.3□□□□□ -0.44
ZIC3O60481 CDH23-201ENST00000224721 11139 ntAPPRIS P5 TSL 5 BASIC12.3□□□□□ -0.44
ZIC3O60481 CDH23-214ENST00000622827 11122 ntAPPRIS ALT1 TSL 5 BASIC12.3□□□□□ -0.44
ZIC3O60481 ADCY7-208ENST00000566433 2535 ntTSL 5 BASIC12.3□□□□□ -0.44
ZIC3O60481 ARHGAP27-203ENST00000428638 4242 ntAPPRIS P2 TSL 5 BASIC12.3□□□□□ -0.44
ZIC3O60481 MORN2-201ENST00000340556 741 ntAPPRIS P1 TSL 1 (best) BASIC12.3□□□□□ -0.44
ZIC3O60481 U3.5-201ENST00000363448 216 ntBASIC12.3□□□□□ -0.44
ZIC3O60481 SLC50A1-202ENST00000368401 1166 ntTSL 1 (best) BASIC12.3□□□□□ -0.44
ZIC3O60481 RPRD2-201ENST00000369067 1043 ntAPPRIS ALT2 TSL 2 BASIC12.3□□□□□ -0.44
ZIC3O60481 CMC4-201ENST00000369479 864 ntAPPRIS P1 TSL 3 BASIC12.3□□□□□ -0.44
ZIC3O60481 C20orf141-201ENST00000380589 730 ntAPPRIS P1 TSL 1 (best) BASIC12.3□□□□□ -0.44
ZIC3O60481 RPL37A-203ENST00000427280 698 ntTSL 5 BASIC12.3□□□□□ -0.44
ZIC3O60481 ARSEP1-202ENST00000430152 499 ntTSL 3 BASIC12.3□□□□□ -0.44
ZIC3O60481 NUBP1-202ENST00000433392 1185 ntTSL 1 (best) BASIC12.3□□□□□ -0.44
ZIC3O60481 RORA-AS1-201ENST00000501579 761 ntTSL 5 BASIC12.3□□□□□ -0.44
ZIC3O60481 AC093909.3-201ENST00000504783 336 ntBASIC12.3□□□□□ -0.44
ZIC3O60481 SNHG15-205ENST00000580458 710 ntTSL 2 BASIC12.3□□□□□ -0.44
ZIC3O60481 AC018761.2-201ENST00000585496 296 ntTSL 3 BASIC12.3□□□□□ -0.44
ZIC3O60481 TMEM205-216ENST00000593256 792 ntAPPRIS P1 TSL 1 (best) BASIC12.3□□□□□ -0.44
ZIC3O60481 ZFP36-201ENST00000594045 690 ntTSL 3 BASIC12.3□□□□□ -0.44
ZIC3O60481 RNF103-CHMP3-202ENST00000604011 1135 ntAPPRIS P1 TSL 2 BASIC12.3□□□□□ -0.44
ZIC3O60481 Z84492.1-201ENST00000606589 408 ntAPPRIS P1 TSL 3 BASIC12.3□□□□□ -0.44
ZIC3O60481 AC090004.1-201ENST00000608606 653 ntAPPRIS P1 TSL 5 BASIC12.3□□□□□ -0.44
ZIC3O60481 AC010976.2-201ENST00000609697 852 ntBASIC12.3□□□□□ -0.44
ZIC3O60481 AC126755.5-201ENST00000622756 267 ntBASIC12.3□□□□□ -0.44
ZIC3O60481 TMEM189-202ENST00000371652 7714 ntAPPRIS P3 TSL 1 (best) BASIC12.3□□□□□ -0.44
ZIC3O60481 NPTN-201ENST00000345330 2444 ntAPPRIS P3 TSL 1 (best) BASIC12.3□□□□□ -0.44
ZIC3O60481 GPN1-211ENST00000610189 1778 ntAPPRIS ALT2 TSL 1 (best) BASIC12.3□□□□□ -0.44
ZIC3O60481 EPHX2-207ENST00000521400 3140 ntAPPRIS P2 TSL 1 (best) BASIC12.3□□□□□ -0.44
ZIC3O60481 UNC13A-202ENST00000519716 9838 ntAPPRIS P2 TSL 5 BASIC12.3□□□□□ -0.44
ZIC3O60481 KCNV1-201ENST00000297404 2927 ntAPPRIS P1 TSL 1 (best) BASIC12.3□□□□□ -0.44
ZIC3O60481 LAMP2-203ENST00000434600 2089 ntAPPRIS ALT2 TSL 1 (best) BASIC12.3□□□□□ -0.44
ZIC3O60481 ZSCAN5B-202ENST00000586855 2059 ntAPPRIS P1 TSL 5 BASIC12.3□□□□□ -0.44
ZIC3O60481 ATP2B2-210ENST00000638646 3465 ntTSL 5 BASIC12.3□□□□□ -0.44
ZIC3O60481 KIR2DS4-201ENST00000339924 1608 ntAPPRIS P5 TSL 1 (best) BASIC12.29□□□□□ -0.44
ZIC3O60481 AC090826.2-201ENST00000568496 4946 ntTSL 2 BASIC12.29□□□□□ -0.44
ZIC3O60481 BCAR1-208ENST00000542031 2846 ntAPPRIS ALT2 TSL 2 BASIC12.29□□□□□ -0.44
ZIC3O60481 RERG-204ENST00000536465 2134 ntAPPRIS P1 TSL 3 BASIC12.29□□□□□ -0.44
ZIC3O60481 POLL-205ENST00000370169 2360 ntAPPRIS P1 TSL 1 (best) BASIC12.29□□□□□ -0.44
ZIC3O60481 CYP51A1P3-201ENST00000400072 1428 ntBASIC12.29□□□□□ -0.44
ZIC3O60481 LIPE-AS1-204ENST00000594624 1448 ntTSL 1 (best) BASIC12.29□□□□□ -0.44
ZIC3O60481 MAGI3-202ENST00000369611 3596 ntAPPRIS P1 TSL 1 (best) BASIC12.29□□□□□ -0.44
ZIC3O60481 DUOXA1-205ENST00000558422 1678 ntTSL 1 (best) BASIC12.29□□□□□ -0.44
ZIC3O60481 ANO6-202ENST00000423947 5504 ntAPPRIS ALT2 TSL 1 (best) BASIC12.29□□□□□ -0.44
ZIC3O60481 ACO1-203ENST00000541043 3618 ntAPPRIS P1 TSL 5 BASIC12.29□□□□□ -0.44
ZIC3O60481 KRT37-201ENST00000225550 1475 ntAPPRIS P1 TSL 1 (best) BASIC12.29□□□□□ -0.44
Retrieved 100 of 98,524 protein–RNA pairs in 35.9 ms