Protein–RNA interactions for Protein: Q96S21

RAB40C, Ras-related protein Rab-40C, humanhuman

Predictions only

Length 281 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RAB40CQ96S21 PIP4K2A-206ENST00000545335 1436 ntTSL 2 BASIC11.22□□□□□ -0.61
RAB40CQ96S21 C12orf10-204ENST00000548632 988 ntTSL 1 (best) BASIC11.22□□□□□ -0.61
RAB40CQ96S21 C12orf73-210ENST00000552940 685 ntTSL 2 BASIC11.22□□□□□ -0.61
RAB40CQ96S21 SPATA8-AS1-201ENST00000558722 465 ntTSL 3 BASIC11.22□□□□□ -0.61
RAB40CQ96S21 ZNF771-204ENST00000566625 2415 ntTSL 1 (best) BASIC11.22□□□□□ -0.61
RAB40CQ96S21 NPLOC4-209ENST00000572760 946 ntTSL 1 (best) BASIC11.22□□□□□ -0.61
RAB40CQ96S21 FXYD6-216ENST00000584230 566 ntAPPRIS ALT1 TSL 3 BASIC11.22□□□□□ -0.61
RAB40CQ96S21 AC015936.2-201ENST00000593177 259 ntBASIC11.22□□□□□ -0.61
RAB40CQ96S21 C5AR2-201ENST00000595464 6746 ntAPPRIS P1 TSL 1 (best) BASIC11.22□□□□□ -0.61
RAB40CQ96S21 AC008687.7-203ENST00000598442 551 ntTSL 4 BASIC11.22□□□□□ -0.61
RAB40CQ96S21 NEAT1-203ENST00000601801 487 ntTSL 4 BASIC11.22□□□□□ -0.61
RAB40CQ96S21 CECR7-204ENST00000609932 568 ntTSL 2 BASIC11.22□□□□□ -0.61
RAB40CQ96S21 SRP9-204ENST00000619790 377 ntTSL 2 BASIC11.22□□□□□ -0.61
RAB40CQ96S21 CCDC163-203ENST00000626657 1526 ntAPPRIS ALT2 TSL 1 (best) BASIC11.22□□□□□ -0.61
RAB40CQ96S21 TGFBRAP1-203ENST00000595531 5595 ntAPPRIS P1 TSL 1 (best) BASIC11.22□□□□□ -0.61
RAB40CQ96S21 QSOX1-202ENST00000367602 9311 ntAPPRIS P3 TSL 1 (best) BASIC11.22□□□□□ -0.61
RAB40CQ96S21 WDR47-204ENST00000369965 4240 ntAPPRIS P3 TSL 1 (best) BASIC11.22□□□□□ -0.61
RAB40CQ96S21 SLC4A2-201ENST00000392826 3947 ntAPPRIS ALT2 TSL 2 BASIC11.22□□□□□ -0.61
RAB40CQ96S21 GSE1-201ENST00000253458 7495 ntAPPRIS P3 TSL 5 BASIC11.22□□□□□ -0.61
RAB40CQ96S21 AKAP13-202ENST00000394510 9128 ntAPPRIS ALT2 TSL 5 BASIC11.22□□□□□ -0.61
RAB40CQ96S21 LSS-201ENST00000356396 2995 ntAPPRIS P1 TSL 1 (best) BASIC11.22□□□□□ -0.61
RAB40CQ96S21 ABLIM2-206ENST00000447017 2902 ntAPPRIS P4 TSL 1 (best) BASIC11.22□□□□□ -0.61
RAB40CQ96S21 CDK11A-201ENST00000356200 2653 ntTSL 5 BASIC11.22□□□□□ -0.61
RAB40CQ96S21 HSPH1-204ENST00000445273 4987 ntTSL 2 BASIC11.21□□□□□ -0.61
RAB40CQ96S21 AL357673.2-201ENST00000623663 4969 ntTSL 5 BASIC11.21□□□□□ -0.61
RAB40CQ96S21 NAA60-214ENST00000572584 2450 ntAPPRIS P1 TSL 1 (best) BASIC11.21□□□□□ -0.61
RAB40CQ96S21 PRKAB1-206ENST00000541640 2303 ntAPPRIS P1 TSL 1 (best) BASIC11.21□□□□□ -0.61
RAB40CQ96S21 AP001972.5-201ENST00000624624 2338 ntBASIC11.21□□□□□ -0.61
RAB40CQ96S21 MPP4-203ENST00000396886 2250 ntTSL 2 BASIC11.21□□□□□ -0.61
RAB40CQ96S21 NDUFAF7-201ENST00000002125 2176 ntAPPRIS P1 TSL 1 (best) BASIC11.21□□□□□ -0.61
RAB40CQ96S21 CNKSR3-204ENST00000479339 2023 ntTSL 1 (best) BASIC11.21□□□□□ -0.61
RAB40CQ96S21 FLT4-212ENST00000619105 3806 ntTSL 5 BASIC11.21□□□□□ -0.61
RAB40CQ96S21 PRUNE1-205ENST00000368937 1850 ntTSL 1 (best) BASIC11.21□□□□□ -0.61
RAB40CQ96S21 AC022497.1-201ENST00000624916 3691 ntBASIC11.21□□□□□ -0.61
RAB40CQ96S21 AAAS-201ENST00000209873 1840 ntAPPRIS P1 TSL 1 (best) BASIC11.21□□□□□ -0.61
RAB40CQ96S21 MCM2-201ENST00000265056 3622 ntAPPRIS P1 TSL 1 (best) BASIC11.21□□□□□ -0.61
RAB40CQ96S21 GDA-203ENST00000376986 1771 ntTSL 2 BASIC11.21□□□□□ -0.61
RAB40CQ96S21 HNRNPMP1-201ENST00000560685 1768 ntBASIC11.21□□□□□ -0.61
RAB40CQ96S21 LINC01002-209ENST00000631858 1761 ntTSL 2 BASIC11.21□□□□□ -0.61
RAB40CQ96S21 TREH-202ENST00000397925 1718 ntTSL 1 (best) BASIC11.21□□□□□ -0.61
RAB40CQ96S21 RTL10-201ENST00000328554 6619 ntAPPRIS P2 TSL 1 (best) BASIC11.21□□□□□ -0.61
RAB40CQ96S21 AMDHD2-202ENST00000302956 3273 ntTSL 1 (best) BASIC11.21□□□□□ -0.61
RAB40CQ96S21 TMEM182-201ENST00000409173 3198 ntTSL 1 (best) BASIC11.21□□□□□ -0.61
RAB40CQ96S21 LINC00665-205ENST00000585356 1557 ntTSL 2 BASIC11.21□□□□□ -0.61
RAB40CQ96S21 KLKP1-203ENST00000600104 1532 ntTSL 1 (best) BASIC11.21□□□□□ -0.61
RAB40CQ96S21 KIF13A-201ENST00000259711 5941 ntAPPRIS P4 TSL 1 (best) BASIC11.21□□□□□ -0.61
RAB40CQ96S21 IL19-201ENST00000270218 1473 ntAPPRIS P1 TSL 1 (best) BASIC11.21□□□□□ -0.61
RAB40CQ96S21 RNASE7-201ENST00000298690 1498 ntAPPRIS P1 TSL 1 (best) BASIC11.21□□□□□ -0.61
RAB40CQ96S21 LINC01815-202ENST00000641468 1409 ntBASIC11.21□□□□□ -0.61
RAB40CQ96S21 SLC25A36-201ENST00000324194 1301 ntAPPRIS ALT1 TSL 1 (best) BASIC11.21□□□□□ -0.61
RAB40CQ96S21 EIF3K-203ENST00000545173 1327 ntAPPRIS ALT1 TSL 2 BASIC11.21□□□□□ -0.61
RAB40CQ96S21 PSMD8-209ENST00000602911 1330 ntTSL 1 (best) BASIC11.21□□□□□ -0.61
RAB40CQ96S21 GNPNAT1-201ENST00000216410 3860 ntAPPRIS P1 TSL 1 (best) BASIC11.21□□□□□ -0.61
RAB40CQ96S21 NINJ2-201ENST00000305108 1252 ntAPPRIS P3 TSL 1 (best) BASIC11.21□□□□□ -0.61
RAB40CQ96S21 AC005229.1-201ENST00000392885 409 ntBASIC11.21□□□□□ -0.61
RAB40CQ96S21 BX284668.5-201ENST00000422124 406 ntTSL 2 BASIC11.21□□□□□ -0.61
RAB40CQ96S21 NME2P1-201ENST00000426182 414 ntBASIC11.21□□□□□ -0.61
RAB40CQ96S21 HLA-V-201ENST00000429037 534 ntBASIC11.21□□□□□ -0.61
RAB40CQ96S21 KDM4A-AS1-204ENST00000439057 686 ntTSL 1 (best) BASIC11.21□□□□□ -0.61
RAB40CQ96S21 TTTY23B-201ENST00000442790 549 ntBASIC11.21□□□□□ -0.61
RAB40CQ96S21 AC012441.2-201ENST00000444843 739 ntBASIC11.21□□□□□ -0.61
RAB40CQ96S21 LINC01428-201ENST00000449581 874 ntTSL 1 (best) BASIC11.21□□□□□ -0.61
RAB40CQ96S21 AC012507.1-201ENST00000454890 600 ntTSL 4 BASIC11.21□□□□□ -0.61
RAB40CQ96S21 AP000696.1-201ENST00000457669 1133 ntTSL 3 BASIC11.21□□□□□ -0.61
RAB40CQ96S21 FHIT-208ENST00000492590 1081 ntAPPRIS P1 TSL 1 (best) BASIC11.21□□□□□ -0.61
RAB40CQ96S21 RPL28-206ENST00000558752 671 ntTSL 3 BASIC11.21□□□□□ -0.61
RAB40CQ96S21 AC091891.1-201ENST00000560688 688 ntTSL 3 BASIC11.21□□□□□ -0.61
RAB40CQ96S21 AC007611.1-201ENST00000568150 826 ntTSL 2 BASIC11.21□□□□□ -0.61
RAB40CQ96S21 AC132938.2-201ENST00000579188 680 ntBASIC11.21□□□□□ -0.61
RAB40CQ96S21 PPY2P-201ENST00000582808 702 ntBASIC11.21□□□□□ -0.61
RAB40CQ96S21 PPY2P-202ENST00000583761 657 ntTSL 1 (best) BASIC11.21□□□□□ -0.61
RAB40CQ96S21 C17orf62-239ENST00000585080 741 ntAPPRIS P1 TSL 5 BASIC11.21□□□□□ -0.61
RAB40CQ96S21 AC138951.2-201ENST00000623455 1161 ntBASIC11.21□□□□□ -0.61
RAB40CQ96S21 AC244517.11-204ENST00000624424 760 ntTSL 5 BASIC11.21□□□□□ -0.61
RAB40CQ96S21 AC105233.6-201ENST00000642093 218 ntBASIC11.21□□□□□ -0.61
RAB40CQ96S21 OFD1-201ENST00000340096 3611 ntAPPRIS P3 TSL 1 (best) BASIC11.21□□□□□ -0.61
RAB40CQ96S21 DLX1-201ENST00000341900 2130 ntTSL 1 (best) BASIC11.21□□□□□ -0.62
RAB40CQ96S21 NBPF3-205ENST00000454000 2133 ntAPPRIS ALT2 TSL 2 BASIC11.21□□□□□ -0.62
RAB40CQ96S21 GLO1-201ENST00000373365 2012 ntAPPRIS P1 TSL 1 (best) BASIC11.21□□□□□ -0.62
RAB40CQ96S21 PPP1R12B-214ENST00000491336 2046 ntTSL 1 (best) BASIC11.21□□□□□ -0.62
RAB40CQ96S21 SRGAP3-202ENST00000383836 8656 ntAPPRIS P1 TSL 1 (best) BASIC11.21□□□□□ -0.62
RAB40CQ96S21 PRTFDC1-201ENST00000320152 1944 ntAPPRIS P1 TSL 1 (best) BASIC11.21□□□□□ -0.62
RAB40CQ96S21 PAX8-202ENST00000263335 3735 ntTSL 1 (best) BASIC11.21□□□□□ -0.62
RAB40CQ96S21 MCL1-204ENST00000620947 3626 ntTSL 1 (best) BASIC11.21□□□□□ -0.62
RAB40CQ96S21 LINC00846-201ENST00000334165 1778 ntTSL 2 BASIC11.21□□□□□ -0.62
RAB40CQ96S21 AC010096.1-201ENST00000443897 1709 ntTSL 1 (best) BASIC11.21□□□□□ -0.62
RAB40CQ96S21 KRT17P5-202ENST00000444070 2552 ntTSL 1 (best) BASIC11.21□□□□□ -0.62
RAB40CQ96S21 C1RL-201ENST00000266542 3394 ntAPPRIS P1 TSL 1 (best) BASIC11.2□□□□□ -0.62
RAB40CQ96S21 VASH1-AS1-202ENST00000556072 1684 ntTSL 2 BASIC11.2□□□□□ -0.62
RAB40CQ96S21 BX324167.2-201ENST00000623717 3316 ntBASIC11.2□□□□□ -0.62
RAB40CQ96S21 TAX1BP1-207ENST00000433216 3174 ntTSL 2 BASIC11.2□□□□□ -0.62
RAB40CQ96S21 KIAA1549-202ENST00000440172 12379 ntAPPRIS P3 TSL 1 (best) BASIC11.2□□□□□ -0.62
RAB40CQ96S21 BSDC1-205ENST00000446293 1505 ntTSL 2 BASIC11.2□□□□□ -0.62
RAB40CQ96S21 DLGAP1-212ENST00000515196 5314 ntTSL 2 BASIC11.2□□□□□ -0.62
RAB40CQ96S21 NCSTN-202ENST00000368063 3031 ntTSL 1 (best) BASIC11.2□□□□□ -0.62
RAB40CQ96S21 EEF2K-201ENST00000263026 7388 ntAPPRIS P1 TSL 5 BASIC11.2□□□□□ -0.62
RAB40CQ96S21 LINC00969-231ENST00000597482 1476 ntTSL 5 BASIC11.2□□□□□ -0.62
RAB40CQ96S21 VPS54-203ENST00000409558 4337 ntAPPRIS ALT1 TSL 1 (best) BASIC11.2□□□□□ -0.62
RAB40CQ96S21 FAM155A-201ENST00000375915 8503 ntAPPRIS P1 TSL 1 (best) BASIC11.2□□□□□ -0.62
RAB40CQ96S21 SLC35B3-201ENST00000379660 2137 ntAPPRIS P1 TSL 1 (best) BASIC11.2□□□□□ -0.62
Retrieved 100 of 98,524 protein–RNA pairs in 53.8 ms