Protein–RNA interactions for Protein: Q8IVM0

CCDC50, Coiled-coil domain-containing protein 50, humanhuman

Predictions only

Length 306 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC50Q8IVM0 TPM2-204ENST00000378300 1771 ntTSL 3 BASIC14.65□□□□□ -0.06
CCDC50Q8IVM0 DUSP13-208ENST00000478873 1335 ntTSL 5 BASIC14.65□□□□□ -0.06
CCDC50Q8IVM0 AC073862.5-201ENST00000624129 2027 ntBASIC14.65□□□□□ -0.06
CCDC50Q8IVM0 ZNF621-202ENST00000339296 6378 ntAPPRIS P1 TSL 1 (best) BASIC14.64□□□□□ -0.07
CCDC50Q8IVM0 TTYH3-204ENST00000407643 4537 ntTSL 5 BASIC14.64□□□□□ -0.07
CCDC50Q8IVM0 KIAA0513-201ENST00000258180 7404 ntAPPRIS P1 TSL 5 BASIC14.64□□□□□ -0.07
CCDC50Q8IVM0 TJAP1-204ENST00000372449 2695 ntTSL 5 BASIC14.64□□□□□ -0.07
CCDC50Q8IVM0 CRY2-212ENST00000616623 4204 ntAPPRIS P2 TSL 1 (best) BASIC14.64□□□□□ -0.07
CCDC50Q8IVM0 FAM167A-AS1-203ENST00000624614 1357 ntTSL 1 (best) BASIC14.64□□□□□ -0.07
CCDC50Q8IVM0 NIPSNAP3A-201ENST00000374767 1633 ntAPPRIS P1 TSL 1 (best) BASIC14.64□□□□□ -0.07
CCDC50Q8IVM0 SARS-201ENST00000234677 1852 ntAPPRIS P1 TSL 1 (best) BASIC14.64□□□□□ -0.07
CCDC50Q8IVM0 GFI1B-207ENST00000636137 1870 ntTSL 5 BASIC14.64□□□□□ -0.07
CCDC50Q8IVM0 FBLN2-207ENST00000492059 4193 ntAPPRIS P4 TSL 2 BASIC14.64□□□□□ -0.07
CCDC50Q8IVM0 DHX30-215ENST00000619982 3574 ntAPPRIS ALT1 TSL 5 BASIC14.64□□□□□ -0.07
CCDC50Q8IVM0 NUDT1-202ENST00000343985 771 ntTSL 1 (best) BASIC14.64□□□□□ -0.07
CCDC50Q8IVM0 MS4A13-201ENST00000378185 808 ntTSL 1 (best) BASIC14.64□□□□□ -0.07
CCDC50Q8IVM0 GAPDH-203ENST00000396858 1292 ntTSL 5 BASIC14.64□□□□□ -0.07
CCDC50Q8IVM0 LAMA4-208ENST00000431543 1080 ntTSL 1 (best) BASIC14.64□□□□□ -0.07
CCDC50Q8IVM0 AC034228.2-201ENST00000432558 459 ntTSL 3 BASIC14.64□□□□□ -0.07
CCDC50Q8IVM0 RNASEH1-AS1-202ENST00000438436 1218 ntTSL 1 (best) BASIC14.64□□□□□ -0.07
CCDC50Q8IVM0 AC009779.1-201ENST00000551138 283 ntBASIC14.64□□□□□ -0.07
CCDC50Q8IVM0 AL583722.2-201ENST00000557223 663 ntTSL 3 BASIC14.64□□□□□ -0.07
CCDC50Q8IVM0 CRISPLD2-210ENST00000569090 808 ntTSL 1 (best) BASIC14.64□□□□□ -0.07
CCDC50Q8IVM0 SNORD3B-2-202ENST00000571722 791 ntBASIC14.64□□□□□ -0.07
CCDC50Q8IVM0 MIR3615-201ENST00000581999 87 ntBASIC14.64□□□□□ -0.07
CCDC50Q8IVM0 AC008133.1-201ENST00000584688 557 ntTSL 4 BASIC14.64□□□□□ -0.07
CCDC50Q8IVM0 AC005695.3-201ENST00000614522 232 ntBASIC14.64□□□□□ -0.07
CCDC50Q8IVM0 BCL2-201ENST00000333681 3209 ntAPPRIS P1 TSL 1 (best) BASIC14.64□□□□□ -0.07
CCDC50Q8IVM0 Z97192.2-201ENST00000393264 2379 ntTSL 2 BASIC14.64□□□□□ -0.07
CCDC50Q8IVM0 RAB37-202ENST00000392610 2858 ntTSL 3 BASIC14.64□□□□□ -0.07
CCDC50Q8IVM0 MKL1-211ENST00000618196 4248 ntAPPRIS P1 TSL 1 (best) BASIC14.64□□□□□ -0.07
CCDC50Q8IVM0 GATA2-201ENST00000341105 3367 ntAPPRIS P1 TSL 1 (best) BASIC14.64□□□□□ -0.07
CCDC50Q8IVM0 TMEM164-203ENST00000372072 4975 ntAPPRIS ALT2 TSL 5 BASIC14.64□□□□□ -0.07
CCDC50Q8IVM0 KCNMA1-285ENST00000640605 3864 ntAPPRIS ALT2 TSL 5 BASIC14.64□□□□□ -0.07
CCDC50Q8IVM0 AC244453.2-201ENST00000457996 3543 ntTSL 1 (best) BASIC14.64□□□□□ -0.07
CCDC50Q8IVM0 SLC4A2-201ENST00000392826 3947 ntAPPRIS ALT2 TSL 2 BASIC14.64□□□□□ -0.07
CCDC50Q8IVM0 ACTN4-203ENST00000424234 1566 ntTSL 1 (best) BASIC14.64□□□□□ -0.07
CCDC50Q8IVM0 PAQR6-214ENST00000613336 1599 ntTSL 3 BASIC14.64□□□□□ -0.07
CCDC50Q8IVM0 PTPN1-202ENST00000541713 3469 ntTSL 2 BASIC14.64□□□□□ -0.07
CCDC50Q8IVM0 ASB3-204ENST00000406687 2205 ntTSL 2 BASIC14.64□□□□□ -0.07
CCDC50Q8IVM0 AP2M1-207ENST00000439647 1950 ntAPPRIS ALT1 TSL 2 BASIC14.64□□□□□ -0.07
CCDC50Q8IVM0 NTN4-203ENST00000538383 1971 ntTSL 2 BASIC14.64□□□□□ -0.07
CCDC50Q8IVM0 ZNF576-202ENST00000391965 1468 ntAPPRIS P1 TSL 2 BASIC14.63□□□□□ -0.07
CCDC50Q8IVM0 CCND3-215ENST00000511642 2394 ntTSL 2 BASIC14.63□□□□□ -0.07
CCDC50Q8IVM0 TBC1D3L-201ENST00000612727 2148 ntAPPRIS P1 TSL 1 (best) BASIC14.63□□□□□ -0.07
CCDC50Q8IVM0 PRUNE1-205ENST00000368937 1850 ntTSL 1 (best) BASIC14.63□□□□□ -0.07
CCDC50Q8IVM0 DCDC2-202ENST00000378454 4707 ntAPPRIS P1 TSL 1 (best) BASIC14.63□□□□□ -0.07
CCDC50Q8IVM0 NCSTN-201ENST00000294785 2936 ntAPPRIS P1 TSL 1 (best) BASIC14.63□□□□□ -0.07
CCDC50Q8IVM0 PRR3-202ENST00000376560 2254 ntAPPRIS P1 TSL 1 (best) BASIC14.63□□□□□ -0.07
CCDC50Q8IVM0 ACSL4-202ENST00000348502 5032 ntAPPRIS ALT1 TSL 1 (best) BASIC14.63□□□□□ -0.07
CCDC50Q8IVM0 KAAG1-201ENST00000274766 1382 ntAPPRIS P1 BASIC14.63□□□□□ -0.07
CCDC50Q8IVM0 NPTN-201ENST00000345330 2444 ntAPPRIS P3 TSL 1 (best) BASIC14.63□□□□□ -0.07
CCDC50Q8IVM0 HERPUD1-203ENST00000379792 1782 ntTSL 5 BASIC14.63□□□□□ -0.07
CCDC50Q8IVM0 ZNF493-208ENST00000599461 1769 ntBASIC14.63□□□□□ -0.07
CCDC50Q8IVM0 KCNN1-201ENST00000222249 3625 ntAPPRIS P2 TSL 1 (best) BASIC14.63□□□□□ -0.07
CCDC50Q8IVM0 GRM4-203ENST00000455714 2574 ntTSL 2 BASIC14.63□□□□□ -0.07
CCDC50Q8IVM0 MSRA-201ENST00000317173 1536 ntAPPRIS P1 TSL 1 (best) BASIC14.63□□□□□ -0.07
CCDC50Q8IVM0 CELF2-216ENST00000637215 2724 ntTSL 5 BASIC14.63□□□□□ -0.07
CCDC50Q8IVM0 AC127496.1-201ENST00000576234 3133 ntTSL 2 BASIC14.63□□□□□ -0.07
CCDC50Q8IVM0 GOSR2-233ENST00000640068 3103 ntTSL 5 BASIC14.63□□□□□ -0.07
CCDC50Q8IVM0 PAM-207ENST00000455264 2898 ntTSL 1 (best) BASIC14.63□□□□□ -0.07
CCDC50Q8IVM0 CHRNA2-207ENST00000520933 2497 ntAPPRIS ALT2 TSL 5 BASIC14.63□□□□□ -0.07
CCDC50Q8IVM0 CDC20B-202ENST00000322374 1679 ntTSL 1 (best) BASIC14.63□□□□□ -0.07
CCDC50Q8IVM0 KLK1-201ENST00000301420 866 ntAPPRIS P1 TSL 1 (best) BASIC14.63□□□□□ -0.07
CCDC50Q8IVM0 ERCC1-203ENST00000340192 949 ntTSL 1 (best) BASIC14.63□□□□□ -0.07
CCDC50Q8IVM0 EDN2-201ENST00000372587 1241 ntAPPRIS P1 TSL 1 (best) BASIC14.63□□□□□ -0.07
CCDC50Q8IVM0 AL139125.1-201ENST00000420395 557 ntTSL 3 BASIC14.63□□□□□ -0.07
CCDC50Q8IVM0 OARD1-212ENST00000482515 832 ntTSL 2 BASIC14.63□□□□□ -0.07
CCDC50Q8IVM0 CHIA-209ENST00000483391 1188 ntTSL 1 (best) BASIC14.63□□□□□ -0.07
CCDC50Q8IVM0 RN7SL530P-201ENST00000485097 298 ntBASIC14.63□□□□□ -0.07
CCDC50Q8IVM0 AC005740.2-201ENST00000511085 419 ntBASIC14.63□□□□□ -0.07
CCDC50Q8IVM0 FXYD6-202ENST00000524656 1033 ntAPPRIS P2 TSL 3 BASIC14.63□□□□□ -0.07
CCDC50Q8IVM0 AC010491.1-202ENST00000567048 528 ntTSL 2 BASIC14.63□□□□□ -0.07
CCDC50Q8IVM0 AC093752.3-201ENST00000567343 901 ntBASIC14.63□□□□□ -0.07
CCDC50Q8IVM0 AC127024.2-201ENST00000581019 789 ntTSL 5 BASIC14.63□□□□□ -0.07
CCDC50Q8IVM0 AC015967.2-201ENST00000624092 234 ntBASIC14.63□□□□□ -0.07
CCDC50Q8IVM0 AC006435.4-201ENST00000625037 234 ntBASIC14.63□□□□□ -0.07
CCDC50Q8IVM0 AL356737.1-201ENST00000634391 234 ntBASIC14.63□□□□□ -0.07
CCDC50Q8IVM0 SPTBN2-201ENST00000309996 7866 ntAPPRIS P1 TSL 1 (best) BASIC14.63□□□□□ -0.07
CCDC50Q8IVM0 AL353608.3-202ENST00000429953 4384 ntTSL 5 BASIC14.63□□□□□ -0.07
CCDC50Q8IVM0 INSC-207ENST00000528567 2237 ntTSL 1 (best) BASIC14.63□□□□□ -0.07
CCDC50Q8IVM0 DYRK4-201ENST00000010132 1840 ntAPPRIS P2 TSL 5 BASIC14.63□□□□□ -0.07
CCDC50Q8IVM0 TMBIM1-201ENST00000258412 2371 ntAPPRIS P1 TSL 1 (best) BASIC14.63□□□□□ -0.07
CCDC50Q8IVM0 CACNA1G-207ENST00000429973 7120 ntAPPRIS ALT2 TSL 1 (best) BASIC14.63□□□□□ -0.07
CCDC50Q8IVM0 CACNA1G-217ENST00000507336 7116 ntAPPRIS ALT2 TSL 1 (best) BASIC14.63□□□□□ -0.07
CCDC50Q8IVM0 ADCY4-202ENST00000418030 3353 ntAPPRIS P1 TSL 1 (best) BASIC14.63□□□□□ -0.07
CCDC50Q8IVM0 DNM1P41-201ENST00000623634 3350 ntBASIC14.63□□□□□ -0.07
CCDC50Q8IVM0 MANEA-AS1-201ENST00000564541 2268 ntBASIC14.63□□□□□ -0.07
CCDC50Q8IVM0 ING4-201ENST00000341550 1709 ntAPPRIS P3 TSL 1 (best) BASIC14.63□□□□□ -0.07
CCDC50Q8IVM0 TRPM5-202ENST00000528453 3535 ntAPPRIS ALT2 TSL 1 (best) BASIC14.63□□□□□ -0.07
CCDC50Q8IVM0 KCNAB2-212ENST00000458166 1336 ntTSL 2 BASIC14.63□□□□□ -0.07
CCDC50Q8IVM0 DACT3-AS1-201ENST00000500689 1304 ntTSL 1 (best) BASIC14.63□□□□□ -0.07
CCDC50Q8IVM0 NLRP2-204ENST00000391721 3420 ntAPPRIS ALT2 TSL 2 BASIC14.63□□□□□ -0.07
CCDC50Q8IVM0 SUPT4H1-201ENST00000225504 1489 ntAPPRIS P1 TSL 1 (best) BASIC14.63□□□□□ -0.07
CCDC50Q8IVM0 ZNRD1ASP-217ENST00000437417 1497 ntTSL 1 (best) BASIC14.63□□□□□ -0.07
CCDC50Q8IVM0 FOSB-213ENST00000615753 1468 ntTSL 1 (best) BASIC14.63□□□□□ -0.07
CCDC50Q8IVM0 LHCGR-201ENST00000294954 3044 ntAPPRIS P2 TSL 1 (best) BASIC14.63□□□□□ -0.07
CCDC50Q8IVM0 PPP1R12A-201ENST00000261207 5582 ntAPPRIS P1 TSL 5 BASIC14.63□□□□□ -0.07
CCDC50Q8IVM0 TEX35-204ENST00000367642 2452 ntAPPRIS ALT2 TSL 5 BASIC14.63□□□□□ -0.07
CCDC50Q8IVM0 CDCA3-202ENST00000422785 2760 ntTSL 2 BASIC14.62□□□□□ -0.07
Retrieved 100 of 98,524 protein–RNA pairs in 35.8 ms