Protein–RNA interactions for Protein: Q86X40

LRRC28, Leucine-rich repeat-containing protein 28, humanhuman

Predicted RBP Predictions only

Length 367 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LRRC28Q86X40 SLC39A6-204ENST00000590986 3003 ntAPPRIS P3 TSL 5 BASIC12.34□□□□□ -0.43
LRRC28Q86X40 NEK3-205ENST00000610828 2396 ntAPPRIS P2 TSL 1 (best) BASIC12.34□□□□□ -0.43
LRRC28Q86X40 ARHGAP33-204ENST00000378944 4219 ntAPPRIS ALT2 TSL 2 BASIC12.34□□□□□ -0.43
LRRC28Q86X40 SMTN-203ENST00000358743 3198 ntAPPRIS P4 TSL 2 BASIC12.34□□□□□ -0.43
LRRC28Q86X40 CXorf40B-202ENST00000370404 1316 ntAPPRIS P2 TSL 2 BASIC12.34□□□□□ -0.43
LRRC28Q86X40 PCOLCE-201ENST00000223061 1702 ntAPPRIS P1 TSL 1 (best) BASIC12.34□□□□□ -0.43
LRRC28Q86X40 MSH2-201ENST00000233146 3307 ntAPPRIS P1 TSL 1 (best) BASIC12.34□□□□□ -0.43
LRRC28Q86X40 GPHN-203ENST00000478722 4297 ntAPPRIS P3 TSL 1 (best) BASIC12.34□□□□□ -0.43
LRRC28Q86X40 LAIR1-201ENST00000348231 1467 ntAPPRIS ALT2 TSL 1 (best) BASIC12.34□□□□□ -0.43
LRRC28Q86X40 DDX5-210ENST00000578804 2021 ntTSL 1 (best) BASIC12.33□□□□□ -0.43
LRRC28Q86X40 PPP6C-203ENST00000451402 4349 ntTSL 2 BASIC12.33□□□□□ -0.43
LRRC28Q86X40 FOS-201ENST00000303562 2158 ntAPPRIS P1 TSL 1 (best) BASIC12.33□□□□□ -0.44
LRRC28Q86X40 AC124319.4-201ENST00000622931 2161 ntBASIC12.33□□□□□ -0.44
LRRC28Q86X40 MICAL1-208ENST00000630715 3678 ntTSL 2 BASIC12.33□□□□□ -0.44
LRRC28Q86X40 LRIF1-202ENST00000485275 1796 ntAPPRIS ALT2 TSL 2 BASIC12.33□□□□□ -0.44
LRRC28Q86X40 PARP3-201ENST00000398755 2336 ntAPPRIS ALT2 TSL 1 (best) BASIC12.33□□□□□ -0.44
LRRC28Q86X40 DRD2-208ENST00000542968 2467 ntAPPRIS P2 TSL 1 (best) BASIC12.33□□□□□ -0.44
LRRC28Q86X40 AMT-239ENST00000636865 1914 ntTSL 5 BASIC12.33□□□□□ -0.44
LRRC28Q86X40 SYBU-217ENST00000528331 2636 ntAPPRIS ALT2 TSL 1 (best) BASIC12.33□□□□□ -0.44
LRRC28Q86X40 CD48-203ENST00000613788 1500 ntTSL 1 (best) BASIC12.33□□□□□ -0.44
LRRC28Q86X40 FCHO1-221ENST00000597512 2934 ntTSL 1 (best) BASIC12.33□□□□□ -0.44
LRRC28Q86X40 AC244394.1-201ENST00000435000 1665 ntBASIC12.33□□□□□ -0.44
LRRC28Q86X40 TNF-208ENST00000449264 1676 ntAPPRIS P1 TSL 1 (best) BASIC12.33□□□□□ -0.44
LRRC28Q86X40 TGM2-201ENST00000361475 5070 ntAPPRIS P1 TSL 1 (best) BASIC12.33□□□□□ -0.44
LRRC28Q86X40 INCENP-201ENST00000278849 3698 ntAPPRIS P3 TSL 5 BASIC12.33□□□□□ -0.44
LRRC28Q86X40 MPV17-201ENST00000233545 998 ntAPPRIS P1 TSL 1 (best) BASIC12.33□□□□□ -0.44
LRRC28Q86X40 CALCA-201ENST00000331587 843 ntTSL 1 (best) BASIC12.33□□□□□ -0.44
LRRC28Q86X40 RPL14-202ENST00000396203 916 ntAPPRIS P1 TSL 1 (best) BASIC12.33□□□□□ -0.44
LRRC28Q86X40 NUDT1-206ENST00000397049 714 ntAPPRIS P1 TSL 1 (best) BASIC12.33□□□□□ -0.44
LRRC28Q86X40 LIMS1-206ENST00000414829 439 ntTSL 1 (best) BASIC12.33□□□□□ -0.44
LRRC28Q86X40 AC244250.1-201ENST00000438185 451 ntTSL 2 BASIC12.33□□□□□ -0.44
LRRC28Q86X40 SEPT7P2-209ENST00000450436 601 ntTSL 4 BASIC12.33□□□□□ -0.44
LRRC28Q86X40 RNMTL1P1-201ENST00000454103 560 ntBASIC12.33□□□□□ -0.44
LRRC28Q86X40 AKR7A2P1-201ENST00000460134 915 ntBASIC12.33□□□□□ -0.44
LRRC28Q86X40 LIMS3-205ENST00000487150 782 ntTSL 3 BASIC12.33□□□□□ -0.44
LRRC28Q86X40 AC005740.2-201ENST00000511085 419 ntBASIC12.33□□□□□ -0.44
LRRC28Q86X40 IGHVIII-5-2-201ENST00000522505 261 ntBASIC12.33□□□□□ -0.44
LRRC28Q86X40 LINC02332-201ENST00000557232 386 ntTSL 3 BASIC12.33□□□□□ -0.44
LRRC28Q86X40 AC020914.3-201ENST00000594712 304 ntBASIC12.33□□□□□ -0.44
LRRC28Q86X40 KC6-205ENST00000599934 556 ntTSL 4 BASIC12.33□□□□□ -0.44
LRRC28Q86X40 UBXN1-218ENST00000616865 1002 ntTSL 5 BASIC12.33□□□□□ -0.44
LRRC28Q86X40 AC004923.1-202ENST00000642106 209 ntBASIC12.33□□□□□ -0.44
LRRC28Q86X40 PACSIN2-202ENST00000337959 3149 ntTSL 5 BASIC12.33□□□□□ -0.44
LRRC28Q86X40 TBC1D14-208ENST00000451522 4149 ntAPPRIS ALT1 TSL 5 BASIC12.33□□□□□ -0.44
LRRC28Q86X40 BCAP29-201ENST00000005259 4572 ntAPPRIS P1 TSL 1 (best) BASIC12.33□□□□□ -0.44
LRRC28Q86X40 PIP5K1A-204ENST00000409426 3737 ntAPPRIS ALT2 TSL 5 BASIC12.33□□□□□ -0.44
LRRC28Q86X40 UBA2-201ENST00000246548 4023 ntAPPRIS P1 TSL 1 (best) BASIC12.33□□□□□ -0.44
LRRC28Q86X40 TRIM35-201ENST00000305364 4229 ntAPPRIS P1 TSL 1 (best) BASIC12.33□□□□□ -0.44
LRRC28Q86X40 IL12RB1-207ENST00000600835 2901 ntAPPRIS P1 TSL 1 (best) BASIC12.33□□□□□ -0.44
LRRC28Q86X40 C9orf170-201ENST00000623052 3239 ntTSL 1 (best) BASIC12.33□□□□□ -0.44
LRRC28Q86X40 HNRNPH1-202ENST00000356731 3667 ntAPPRIS P1 TSL 2 BASIC12.33□□□□□ -0.44
LRRC28Q86X40 THOC6-207ENST00000574549 1300 ntTSL 1 (best) BASIC12.33□□□□□ -0.44
LRRC28Q86X40 AC138028.6-201ENST00000616106 1482 ntBASIC12.33□□□□□ -0.44
LRRC28Q86X40 TP73-203ENST00000357733 4899 ntTSL 5 BASIC12.33□□□□□ -0.44
LRRC28Q86X40 ARRB2-204ENST00000412477 1779 ntTSL 2 BASIC12.33□□□□□ -0.44
LRRC28Q86X40 GK-204ENST00000378945 2063 ntAPPRIS P3 TSL 1 (best) BASIC12.33□□□□□ -0.44
LRRC28Q86X40 EPB42-203ENST00000540029 2098 ntTSL 2 BASIC12.33□□□□□ -0.44
LRRC28Q86X40 FTO-214ENST00000636218 2227 ntTSL 5 BASIC12.33□□□□□ -0.44
LRRC28Q86X40 KCNJ11-201ENST00000339994 2801 ntAPPRIS P1 BASIC12.33□□□□□ -0.44
LRRC28Q86X40 SGSM3-201ENST00000248929 2969 ntAPPRIS P1 TSL 1 (best) BASIC12.33□□□□□ -0.44
LRRC28Q86X40 KCNMA1-285ENST00000640605 3864 ntAPPRIS ALT2 TSL 5 BASIC12.33□□□□□ -0.44
LRRC28Q86X40 CSNK1G3-201ENST00000345990 4635 ntAPPRIS ALT2 TSL 1 (best) BASIC12.33□□□□□ -0.44
LRRC28Q86X40 RNF43-201ENST00000407977 5516 ntAPPRIS P1 TSL 2 BASIC12.33□□□□□ -0.44
LRRC28Q86X40 XPOT-201ENST00000332707 6414 ntAPPRIS P1 TSL 2 BASIC12.33□□□□□ -0.44
LRRC28Q86X40 MCC-201ENST00000302475 8257 ntTSL 1 (best) BASIC12.32□□□□□ -0.44
LRRC28Q86X40 KIF9-208ENST00000452770 2707 ntAPPRIS P1 TSL 1 (best) BASIC12.32□□□□□ -0.44
LRRC28Q86X40 ZNF799-202ENST00000430385 2583 ntAPPRIS P1 TSL 2 BASIC12.32□□□□□ -0.44
LRRC28Q86X40 KRT17P4-205ENST00000579946 2555 ntTSL 1 (best) BASIC12.32□□□□□ -0.44
LRRC28Q86X40 LINC01535-206ENST00000592712 1699 ntTSL 1 (best) BASIC12.32□□□□□ -0.44
LRRC28Q86X40 TMEM233-201ENST00000426426 3081 ntAPPRIS P1 TSL 2 BASIC12.32□□□□□ -0.44
LRRC28Q86X40 SLC39A11-202ENST00000542342 2752 ntAPPRIS ALT1 TSL 2 BASIC12.32□□□□□ -0.44
LRRC28Q86X40 ZDHHC11-201ENST00000283441 2604 ntAPPRIS P1 TSL 1 (best) BASIC12.32□□□□□ -0.44
LRRC28Q86X40 VAMP7-202ENST00000286448 2646 ntAPPRIS P1 TSL 1 (best) BASIC12.32□□□□□ -0.44
LRRC28Q86X40 LINC01623-201ENST00000440244 2458 ntTSL 1 (best) BASIC12.32□□□□□ -0.44
LRRC28Q86X40 PLEKHA7-202ENST00000355661 4980 ntAPPRIS P2 TSL 1 (best) BASIC12.32□□□□□ -0.44
LRRC28Q86X40 AMDHD2-202ENST00000302956 3273 ntTSL 1 (best) BASIC12.32□□□□□ -0.44
LRRC28Q86X40 SELENOV-202ENST00000423711 1701 ntTSL 5 BASIC12.32□□□□□ -0.44
LRRC28Q86X40 AC004899.1-201ENST00000424687 1714 ntBASIC12.32□□□□□ -0.44
LRRC28Q86X40 BEND6-202ENST00000370746 2379 ntAPPRIS P1 TSL 5 BASIC12.32□□□□□ -0.44
LRRC28Q86X40 SH3GLB2-205ENST00000416629 1415 ntTSL 5 BASIC12.32□□□□□ -0.44
LRRC28Q86X40 HARS-207ENST00000504156 3334 ntAPPRIS P1 TSL 1 (best) BASIC12.32□□□□□ -0.44
LRRC28Q86X40 BTNL8-201ENST00000231229 2229 ntTSL 1 (best) BASIC12.32□□□□□ -0.44
LRRC28Q86X40 CCNY-203ENST00000374704 3960 ntAPPRIS P4 TSL 1 (best) BASIC12.32□□□□□ -0.44
LRRC28Q86X40 TPRKB-202ENST00000318190 819 ntTSL 5 BASIC12.32□□□□□ -0.44
LRRC28Q86X40 IP6K2-202ENST00000340879 1185 ntTSL 1 (best) BASIC12.32□□□□□ -0.44
LRRC28Q86X40 C1orf53-201ENST00000367393 588 ntAPPRIS P1 TSL 1 (best) BASIC12.32□□□□□ -0.44
LRRC28Q86X40 DPM3-202ENST00000368399 517 ntBASIC12.32□□□□□ -0.44
LRRC28Q86X40 WDR3-202ENST00000369441 1035 ntTSL 1 (best) BASIC12.32□□□□□ -0.44
LRRC28Q86X40 ETV2-201ENST00000379023 926 ntAPPRIS ALT2 TSL 1 (best) BASIC12.32□□□□□ -0.44
LRRC28Q86X40 C9orf24-203ENST00000379126 496 ntTSL 1 (best) BASIC12.32□□□□□ -0.44
LRRC28Q86X40 AC018685.1-201ENST00000457813 368 ntTSL 3 BASIC12.32□□□□□ -0.44
LRRC28Q86X40 PRSS30P-202ENST00000475030 752 ntTSL 1 (best) BASIC12.32□□□□□ -0.44
LRRC28Q86X40 BTNL8-205ENST00000505126 1294 ntTSL 2 BASIC12.32□□□□□ -0.44
LRRC28Q86X40 PRSS30P-205ENST00000506153 699 ntTSL 1 (best) BASIC12.32□□□□□ -0.44
LRRC28Q86X40 AC026495.1-203ENST00000557528 906 ntTSL 5 BASIC12.32□□□□□ -0.44
LRRC28Q86X40 TMEM208-207ENST00000563953 887 ntTSL 2 BASIC12.32□□□□□ -0.44
LRRC28Q86X40 TSR1-204ENST00000576112 1290 ntTSL 5 BASIC12.32□□□□□ -0.44
LRRC28Q86X40 IRF3-223ENST00000599223 1055 ntTSL 1 (best) BASIC12.32□□□□□ -0.44
LRRC28Q86X40 LINC00658-206ENST00000600157 901 ntTSL 5 BASIC12.32□□□□□ -0.44
LRRC28Q86X40 AL451050.2-201ENST00000606967 682 ntBASIC12.32□□□□□ -0.44
Retrieved 100 of 98,524 protein–RNA pairs in 74.7 ms