Protein–RNA interactions for Protein: Q2TBC4

PRICKLE4, Prickle-like protein 4, humanhuman

Predictions only

Length 344 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PRICKLE4Q2TBC4 AC005041.3-201ENST00000606287 649 ntBASIC12.77□□□□□ -0.37
PRICKLE4Q2TBC4 SLC12A5-219ENST00000628272 401 ntTSL 3 BASIC12.77□□□□□ -0.37
PRICKLE4Q2TBC4 CICP9-201ENST00000444451 1913 ntBASIC12.77□□□□□ -0.37
PRICKLE4Q2TBC4 SLC5A11-211ENST00000569071 1919 ntTSL 5 BASIC12.77□□□□□ -0.37
PRICKLE4Q2TBC4 CCDC180-210ENST00000529487 5242 ntAPPRIS P1 TSL 1 (best) BASIC12.77□□□□□ -0.37
PRICKLE4Q2TBC4 NUP98-204ENST00000397004 3923 ntTSL 1 (best) BASIC12.77□□□□□ -0.37
PRICKLE4Q2TBC4 RCBTB2-205ENST00000544492 2622 ntTSL 2 BASIC12.77□□□□□ -0.37
PRICKLE4Q2TBC4 RABEPK-201ENST00000259460 1313 ntTSL 1 (best) BASIC12.77□□□□□ -0.37
PRICKLE4Q2TBC4 HOXA1-202ENST00000355633 2016 ntTSL 1 (best) BASIC12.77□□□□□ -0.37
PRICKLE4Q2TBC4 TMPRSS4-213ENST00000522824 2052 ntAPPRIS ALT2 TSL 1 (best) BASIC12.77□□□□□ -0.37
PRICKLE4Q2TBC4 SMARCA2-214ENST00000450198 5602 ntTSL 1 (best) BASIC12.77□□□□□ -0.37
PRICKLE4Q2TBC4 GNAO1-214ENST00000638705 3529 ntAPPRIS P5 TSL 1 (best) BASIC12.77□□□□□ -0.37
PRICKLE4Q2TBC4 TBCE-207ENST00000543662 2117 ntAPPRIS ALT2 TSL 2 BASIC12.77□□□□□ -0.37
PRICKLE4Q2TBC4 ZNRF3-202ENST00000406323 2878 ntAPPRIS P3 TSL 1 (best) BASIC12.77□□□□□ -0.37
PRICKLE4Q2TBC4 OR10AC1-201ENST00000439431 2898 ntAPPRIS P1 BASIC12.77□□□□□ -0.37
PRICKLE4Q2TBC4 DNM2-204ENST00000408974 3013 ntAPPRIS ALT1 TSL 2 BASIC12.77□□□□□ -0.37
PRICKLE4Q2TBC4 SELENBP1-208ENST00000447402 1530 ntTSL 2 BASIC12.77□□□□□ -0.37
PRICKLE4Q2TBC4 SCML4-203ENST00000369022 2377 ntTSL 2 BASIC12.77□□□□□ -0.37
PRICKLE4Q2TBC4 ZNF568-206ENST00000455427 2378 ntTSL 2 BASIC12.77□□□□□ -0.37
PRICKLE4Q2TBC4 TXNDC9-201ENST00000264255 1637 ntAPPRIS P1 TSL 1 (best) BASIC12.77□□□□□ -0.37
PRICKLE4Q2TBC4 ARPC4-TTLL3-201ENST00000397256 2466 ntAPPRIS P1 TSL 5 BASIC12.77□□□□□ -0.37
PRICKLE4Q2TBC4 FBXO3-203ENST00000526785 5798 ntTSL 1 (best) BASIC12.77□□□□□ -0.37
PRICKLE4Q2TBC4 DESI2-202ENST00000302550 4208 ntAPPRIS P1 TSL 1 (best) BASIC12.77□□□□□ -0.37
PRICKLE4Q2TBC4 PRPSAP1-206ENST00000446526 3660 ntAPPRIS P1 TSL 1 (best) BASIC12.76□□□□□ -0.37
PRICKLE4Q2TBC4 AL031595.1-201ENST00000623969 4709 ntBASIC12.76□□□□□ -0.37
PRICKLE4Q2TBC4 NUB1-201ENST00000413040 3180 ntAPPRIS P3 TSL 1 (best) BASIC12.76□□□□□ -0.37
PRICKLE4Q2TBC4 PGM3-201ENST00000283977 2219 ntTSL 5 BASIC12.76□□□□□ -0.37
PRICKLE4Q2TBC4 LSM14A-201ENST00000433627 3424 ntAPPRIS ALT1 TSL 1 (best) BASIC12.76□□□□□ -0.37
PRICKLE4Q2TBC4 CCDC126-202ENST00000409765 2324 ntAPPRIS P1 TSL 1 (best) BASIC12.76□□□□□ -0.37
PRICKLE4Q2TBC4 B3GAT1-202ENST00000392580 3522 ntAPPRIS P1 TSL 1 (best) BASIC12.76□□□□□ -0.37
PRICKLE4Q2TBC4 SDR16C5-202ENST00000396721 2399 ntTSL 1 (best) BASIC12.76□□□□□ -0.37
PRICKLE4Q2TBC4 SDC2-201ENST00000302190 3759 ntAPPRIS P1 TSL 1 (best) BASIC12.76□□□□□ -0.37
PRICKLE4Q2TBC4 TMEM14C-201ENST00000229563 1113 ntAPPRIS P1 TSL 1 (best) BASIC12.76□□□□□ -0.37
PRICKLE4Q2TBC4 GON7-201ENST00000306954 1154 ntAPPRIS P1 TSL 1 (best) BASIC12.76□□□□□ -0.37
PRICKLE4Q2TBC4 NUDT1-201ENST00000339737 698 ntAPPRIS P1 TSL 1 (best) BASIC12.76□□□□□ -0.37
PRICKLE4Q2TBC4 AC147651.3-201ENST00000429872 731 ntTSL 2 BASIC12.76□□□□□ -0.37
PRICKLE4Q2TBC4 AP000356.1-201ENST00000438893 364 ntTSL 3 BASIC12.76□□□□□ -0.37
PRICKLE4Q2TBC4 DLEU2-205ENST00000443587 705 ntTSL 5 BASIC12.76□□□□□ -0.37
PRICKLE4Q2TBC4 LY6E-208ENST00000520531 490 ntTSL 2 BASIC12.76□□□□□ -0.37
PRICKLE4Q2TBC4 C11orf97-201ENST00000542198 701 ntAPPRIS P1 TSL 5 BASIC12.76□□□□□ -0.37
PRICKLE4Q2TBC4 VENTXP3-201ENST00000546480 773 ntBASIC12.76□□□□□ -0.37
PRICKLE4Q2TBC4 AC079328.1-201ENST00000560358 952 ntBASIC12.76□□□□□ -0.37
PRICKLE4Q2TBC4 AC020659.1-202ENST00000564432 531 ntTSL 5 BASIC12.76□□□□□ -0.37
PRICKLE4Q2TBC4 MAFTRR-203ENST00000567993 685 ntTSL 3 BASIC12.76□□□□□ -0.37
PRICKLE4Q2TBC4 NAA38-204ENST00000575208 529 ntTSL 3 BASIC12.76□□□□□ -0.37
PRICKLE4Q2TBC4 NUDT4P2-201ENST00000578341 546 ntBASIC12.76□□□□□ -0.37
PRICKLE4Q2TBC4 RN7SL470P-201ENST00000583069 259 ntBASIC12.76□□□□□ -0.37
PRICKLE4Q2TBC4 WDR7-208ENST00000589935 544 ntTSL 4 BASIC12.76□□□□□ -0.37
PRICKLE4Q2TBC4 AC016629.1-201ENST00000596579 586 ntBASIC12.76□□□□□ -0.37
PRICKLE4Q2TBC4 AC092171.5-201ENST00000608012 942 ntBASIC12.76□□□□□ -0.37
PRICKLE4Q2TBC4 AC107464.3-201ENST00000609172 737 ntBASIC12.76□□□□□ -0.37
PRICKLE4Q2TBC4 HIST1H3C-201ENST00000612966 411 ntAPPRIS P1 BASIC12.76□□□□□ -0.37
PRICKLE4Q2TBC4 Metazoa_SRP.69-201ENST00000615730 281 ntBASIC12.76□□□□□ -0.37
PRICKLE4Q2TBC4 PSMD5-208ENST00000625444 219 ntTSL 5 BASIC12.76□□□□□ -0.37
PRICKLE4Q2TBC4 BNIP1-201ENST00000231668 1339 ntTSL 1 (best) BASIC12.76□□□□□ -0.37
PRICKLE4Q2TBC4 SFXN4-201ENST00000355697 1363 ntAPPRIS P1 TSL 1 (best) BASIC12.76□□□□□ -0.37
PRICKLE4Q2TBC4 RIPOR1-204ENST00000428437 4152 ntAPPRIS ALT2 TSL 2 BASIC12.76□□□□□ -0.37
PRICKLE4Q2TBC4 POM121-202ENST00000395270 7011 ntAPPRIS ALT2 TSL 1 (best) BASIC12.76□□□□□ -0.37
PRICKLE4Q2TBC4 DCAF5-209ENST00000557386 2883 ntAPPRIS ALT1 TSL 1 (best) BASIC12.76□□□□□ -0.37
PRICKLE4Q2TBC4 SLC25A19-205ENST00000442286 1496 ntAPPRIS P1 TSL 5 BASIC12.76□□□□□ -0.37
PRICKLE4Q2TBC4 PDHB-201ENST00000302746 1527 ntAPPRIS P1 TSL 1 (best) BASIC12.76□□□□□ -0.37
PRICKLE4Q2TBC4 MBOAT4-201ENST00000320542 1512 ntAPPRIS P1 TSL 1 (best) BASIC12.76□□□□□ -0.37
PRICKLE4Q2TBC4 TMEM9-202ENST00000367332 1544 ntAPPRIS ALT1 TSL 2 BASIC12.76□□□□□ -0.37
PRICKLE4Q2TBC4 FGD4-203ENST00000472289 1629 ntTSL 2 BASIC12.76□□□□□ -0.37
PRICKLE4Q2TBC4 FAM109A-201ENST00000361483 3256 ntAPPRIS ALT2 TSL 3 BASIC12.76□□□□□ -0.37
PRICKLE4Q2TBC4 LINC00943-204ENST00000537374 1688 ntTSL 5 BASIC12.76□□□□□ -0.37
PRICKLE4Q2TBC4 GLI2-210ENST00000452319 6799 ntAPPRIS P1 TSL 5 BASIC12.76□□□□□ -0.37
PRICKLE4Q2TBC4 LINC01922-202ENST00000567168 1704 ntTSL 1 (best) BASIC12.76□□□□□ -0.37
PRICKLE4Q2TBC4 ARAP3-201ENST00000239440 5250 ntAPPRIS P1 TSL 1 (best) BASIC12.76□□□□□ -0.37
PRICKLE4Q2TBC4 GFI1B-202ENST00000372122 1797 ntAPPRIS P1 TSL 1 (best) BASIC12.76□□□□□ -0.37
PRICKLE4Q2TBC4 GDA-203ENST00000376986 1771 ntTSL 2 BASIC12.76□□□□□ -0.37
PRICKLE4Q2TBC4 MAP3K21-202ENST00000366623 3910 ntAPPRIS ALT2 TSL 1 (best) BASIC12.76□□□□□ -0.37
PRICKLE4Q2TBC4 EPHA2-201ENST00000358432 3964 ntAPPRIS P1 TSL 1 (best) BASIC12.76□□□□□ -0.37
PRICKLE4Q2TBC4 ZSCAN5B-202ENST00000586855 2059 ntAPPRIS P1 TSL 5 BASIC12.76□□□□□ -0.37
PRICKLE4Q2TBC4 KHNYN-201ENST00000251343 6725 ntAPPRIS P1 TSL 1 (best) BASIC12.76□□□□□ -0.37
PRICKLE4Q2TBC4 CPT1B-202ENST00000360719 2319 ntAPPRIS P1 TSL 2 BASIC12.76□□□□□ -0.37
PRICKLE4Q2TBC4 ACIN1-201ENST00000262710 4935 ntAPPRIS P3 TSL 1 (best) BASIC12.76□□□□□ -0.37
PRICKLE4Q2TBC4 SMARCA2-254ENST00000636903 2471 ntTSL 5 BASIC12.76□□□□□ -0.37
PRICKLE4Q2TBC4 CCDC57-203ENST00000392343 2896 ntAPPRIS P2 TSL 1 (best) BASIC12.75□□□□□ -0.37
PRICKLE4Q2TBC4 LMX1B-202ENST00000373474 5797 ntTSL 1 (best) BASIC12.75□□□□□ -0.37
PRICKLE4Q2TBC4 IL11RA-208ENST00000555003 3008 ntAPPRIS P1 TSL 2 BASIC12.75□□□□□ -0.37
PRICKLE4Q2TBC4 TRPV4-202ENST00000418703 3247 ntAPPRIS P1 TSL 1 (best) BASIC12.75□□□□□ -0.37
PRICKLE4Q2TBC4 TMEM189-202ENST00000371652 7714 ntAPPRIS P3 TSL 1 (best) BASIC12.75□□□□□ -0.37
PRICKLE4Q2TBC4 SNAP91-215ENST00000521743 4263 ntAPPRIS P2 TSL 5 BASIC12.75□□□□□ -0.37
PRICKLE4Q2TBC4 MMAB-210ENST00000545712 4438 ntAPPRIS P1 TSL 1 (best) BASIC12.75□□□□□ -0.37
PRICKLE4Q2TBC4 GTF2I-215ENST00000614986 4415 ntAPPRIS ALT1 TSL 1 (best) BASIC12.75□□□□□ -0.37
PRICKLE4Q2TBC4 GTF2I-221ENST00000621734 4412 ntAPPRIS ALT2 TSL 1 (best) BASIC12.75□□□□□ -0.37
PRICKLE4Q2TBC4 PCDHGA6-202ENST00000610583 5650 ntAPPRIS P1 BASIC12.75□□□□□ -0.37
PRICKLE4Q2TBC4 GNAO1-202ENST00000262494 5767 ntAPPRIS ALT1 TSL 1 (best) BASIC12.75□□□□□ -0.37
PRICKLE4Q2TBC4 ELP1-201ENST00000374647 5905 ntAPPRIS P1 TSL 1 (best) BASIC12.75□□□□□ -0.37
PRICKLE4Q2TBC4 ZNF618-207ENST00000615615 9289 ntAPPRIS ALT2 TSL 1 (best) BASIC12.75□□□□□ -0.37
PRICKLE4Q2TBC4 SPAG9-201ENST00000262013 8273 ntTSL 1 (best) BASIC12.75□□□□□ -0.37
PRICKLE4Q2TBC4 IL19-201ENST00000270218 1473 ntAPPRIS P1 TSL 1 (best) BASIC12.75□□□□□ -0.37
PRICKLE4Q2TBC4 TAGLN3-201ENST00000273368 1349 ntAPPRIS P1 TSL 1 (best) BASIC12.75□□□□□ -0.37
PRICKLE4Q2TBC4 MTCL1-202ENST00000359865 6093 ntAPPRIS P2 TSL 2 BASIC12.75□□□□□ -0.37
PRICKLE4Q2TBC4 UQCC1-204ENST00000374384 2201 ntTSL 2 BASIC12.75□□□□□ -0.37
PRICKLE4Q2TBC4 PDCD5-202ENST00000379316 154 ntTSL 1 (best) BASIC12.75□□□□□ -0.37
PRICKLE4Q2TBC4 ECI2-202ENST00000380118 1407 ntAPPRIS P1 TSL 1 (best) BASIC12.75□□□□□ -0.37
PRICKLE4Q2TBC4 ELN-209ENST00000380576 3109 ntAPPRIS ALT2 TSL 1 (best) BASIC12.75□□□□□ -0.37
PRICKLE4Q2TBC4 Z69890.1-201ENST00000382990 339 ntBASIC12.75□□□□□ -0.37
Retrieved 100 of 98,524 protein–RNA pairs in 31.9 ms