Protein–RNA interactions for Protein: P78406

RAE1, mRNA export factor, humanhuman

Known RBP Predictions only

Length 368 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RAE1P78406 GABRB3-219ENST00000636466 4509 ntTSL 5 BASIC13.01□□□□□ -0.33
RAE1P78406 NF1-204ENST00000431387 2889 ntTSL 1 (best) BASIC13.01□□□□□ -0.33
RAE1P78406 SCARB2-227ENST00000640957 3255 ntAPPRIS ALT1 TSL 5 BASIC13.01□□□□□ -0.33
RAE1P78406 HECTD3-202ENST00000372172 3610 ntAPPRIS P1 TSL 5 BASIC13.01□□□□□ -0.33
RAE1P78406 SLC4A7-207ENST00000437179 3667 ntTSL 1 (best) BASIC13.01□□□□□ -0.33
RAE1P78406 TEX13B-201ENST00000302917 1248 ntAPPRIS P1 TSL 1 (best) BASIC13.01□□□□□ -0.33
RAE1P78406 LMO1-201ENST00000335790 1279 ntAPPRIS P3 TSL 1 (best) BASIC13.01□□□□□ -0.33
RAE1P78406 DPCD-202ENST00000370151 858 ntAPPRIS P1 TSL 1 (best) BASIC13.01□□□□□ -0.33
RAE1P78406 KCNAB2-207ENST00000378111 822 ntTSL 3 BASIC13.01□□□□□ -0.33
RAE1P78406 ZNF226-203ENST00000413984 716 ntTSL 3 BASIC13.01□□□□□ -0.33
RAE1P78406 DCAF7-201ENST00000415273 1220 ntTSL 2 BASIC13.01□□□□□ -0.33
RAE1P78406 AL137058.1-201ENST00000418237 673 ntTSL 5 BASIC13.01□□□□□ -0.33
RAE1P78406 AC006329.1-201ENST00000419422 705 ntTSL 2 BASIC13.01□□□□□ -0.33
RAE1P78406 AL590617.2-201ENST00000432673 917 ntTSL 3 BASIC13.01□□□□□ -0.33
RAE1P78406 BUD31-205ENST00000456893 512 ntTSL 5 BASIC13.01□□□□□ -0.33
RAE1P78406 AC093627.2-201ENST00000497017 568 ntTSL 4 BASIC13.01□□□□□ -0.33
RAE1P78406 ADM-203ENST00000525063 867 ntAPPRIS P1 TSL 3 BASIC13.01□□□□□ -0.33
RAE1P78406 SAA2-206ENST00000530400 323 ntTSL 3 BASIC13.01□□□□□ -0.33
RAE1P78406 LMO1-204ENST00000534484 770 ntAPPRIS ALT1 TSL 5 BASIC13.01□□□□□ -0.33
RAE1P78406 AC129102.1-201ENST00000535755 525 ntTSL 4 BASIC13.01□□□□□ -0.33
RAE1P78406 KRT8P2-201ENST00000556193 944 ntBASIC13.01□□□□□ -0.33
RAE1P78406 AC135983.1-201ENST00000562108 1097 ntTSL 2 BASIC13.01□□□□□ -0.33
RAE1P78406 TXNDC17-208ENST00000574838 746 ntTSL 3 BASIC13.01□□□□□ -0.33
RAE1P78406 AC068675.1-201ENST00000588996 561 ntTSL 4 BASIC13.01□□□□□ -0.33
RAE1P78406 AC084346.2-201ENST00000607097 949 ntBASIC13.01□□□□□ -0.33
RAE1P78406 Z82244.1-201ENST00000631502 840 ntBASIC13.01□□□□□ -0.33
RAE1P78406 MTUS1-229ENST00000634613 1193 ntTSL 5 BASIC13.01□□□□□ -0.33
RAE1P78406 OR8J1-202ENST00000533152 1320 ntAPPRIS P1 BASIC13.01□□□□□ -0.33
RAE1P78406 MSANTD2P1-201ENST00000445341 1368 ntBASIC13.01□□□□□ -0.33
RAE1P78406 NELFE-201ENST00000375425 1405 ntAPPRIS ALT2 TSL 2 BASIC13.01□□□□□ -0.33
RAE1P78406 AC117503.4-201ENST00000623229 1418 ntBASIC13.01□□□□□ -0.33
RAE1P78406 SELENON-202ENST00000361547 4334 ntAPPRIS P4 TSL 1 (best) BASIC13.01□□□□□ -0.33
RAE1P78406 CNBP-205ENST00000500450 1516 ntTSL 2 BASIC13.01□□□□□ -0.33
RAE1P78406 TUBA1B-202ENST00000336023 1627 ntAPPRIS P1 TSL 1 (best) BASIC13.01□□□□□ -0.33
RAE1P78406 ACVR1B-202ENST00000415850 1665 ntTSL 2 BASIC13.01□□□□□ -0.33
RAE1P78406 USP17L2-201ENST00000333796 1910 ntAPPRIS P1 BASIC13.01□□□□□ -0.33
RAE1P78406 ZNF595-203ENST00000608255 1999 ntTSL 2 BASIC13.01□□□□□ -0.33
RAE1P78406 PPT1-204ENST00000439754 2195 ntTSL 3 BASIC13.01□□□□□ -0.33
RAE1P78406 SPN-201ENST00000360121 6894 ntAPPRIS P2 TSL 1 (best) BASIC13.01□□□□□ -0.33
RAE1P78406 EFR3B-205ENST00000405108 2432 ntTSL 1 (best) BASIC13.01□□□□□ -0.33
RAE1P78406 NAA60-214ENST00000572584 2450 ntAPPRIS P1 TSL 1 (best) BASIC13.01□□□□□ -0.33
RAE1P78406 TMEM182-202ENST00000409528 3112 ntTSL 1 (best) BASIC13.01□□□□□ -0.33
RAE1P78406 NLRP7-207ENST00000590030 3209 ntAPPRIS ALT2 TSL 1 (best) BASIC13.01□□□□□ -0.33
RAE1P78406 AC244453.2-201ENST00000457996 3543 ntTSL 1 (best) BASIC13.01□□□□□ -0.33
RAE1P78406 CANX-202ENST00000452673 4207 ntAPPRIS P1 TSL 1 (best) BASIC13.01□□□□□ -0.33
RAE1P78406 IRF6-204ENST00000542854 4256 ntTSL 2 BASIC13.01□□□□□ -0.33
RAE1P78406 FBXO3-203ENST00000526785 5798 ntTSL 1 (best) BASIC13□□□□□ -0.33
RAE1P78406 PRDM16-206ENST00000511072 4282 ntAPPRIS ALT2 TSL 5 BASIC13□□□□□ -0.33
RAE1P78406 PTPN1-202ENST00000541713 3469 ntTSL 2 BASIC13□□□□□ -0.33
RAE1P78406 SECISBP2-201ENST00000339901 3320 ntTSL 1 (best) BASIC13□□□□□ -0.33
RAE1P78406 TRIM26-267ENST00000453195 3318 ntAPPRIS P1 TSL 1 (best) BASIC13□□□□□ -0.33
RAE1P78406 STRIP2-202ENST00000435494 2866 ntTSL 1 (best) BASIC13□□□□□ -0.33
RAE1P78406 MLPH-202ENST00000338530 2332 ntAPPRIS ALT2 TSL 1 (best) BASIC13□□□□□ -0.33
RAE1P78406 PARVB-201ENST00000338758 5429 ntAPPRIS P1 TSL 1 (best) BASIC13□□□□□ -0.33
RAE1P78406 SLC7A9-201ENST00000023064 1761 ntAPPRIS P1 TSL 1 (best) BASIC13□□□□□ -0.33
RAE1P78406 PHTF2-204ENST00000415251 1738 ntTSL 1 (best) BASIC13□□□□□ -0.33
RAE1P78406 LYRM9-202ENST00000379103 1685 ntAPPRIS P1 TSL 3 BASIC13□□□□□ -0.33
RAE1P78406 MCF2L-209ENST00000397036 1544 ntTSL 2 BASIC13□□□□□ -0.33
RAE1P78406 DCUN1D4-202ENST00000381441 4207 ntTSL 1 (best) BASIC13□□□□□ -0.33
RAE1P78406 AC131212.3-201ENST00000624087 4219 ntBASIC13□□□□□ -0.33
RAE1P78406 ERGIC3-203ENST00000357394 1357 ntAPPRIS P4 TSL 2 BASIC13□□□□□ -0.33
RAE1P78406 RAMP3-201ENST00000242249 1323 ntAPPRIS P2 TSL 1 (best) BASIC13□□□□□ -0.33
RAE1P78406 C12orf65-204ENST00000429587 1326 ntAPPRIS P2 TSL 2 BASIC13□□□□□ -0.33
RAE1P78406 ZNF581-203ENST00000587252 1324 ntAPPRIS P1 TSL 2 BASIC13□□□□□ -0.33
RAE1P78406 SLC6A10P-201ENST00000330048 3846 ntTSL 2 BASIC13□□□□□ -0.33
RAE1P78406 TCEAL6-201ENST00000372773 983 ntAPPRIS P1 TSL 3 BASIC13□□□□□ -0.33
RAE1P78406 PLA2G12B-201ENST00000373032 1128 ntAPPRIS P1 TSL 1 (best) BASIC13□□□□□ -0.33
RAE1P78406 CFL1P6-201ENST00000400899 494 ntBASIC13□□□□□ -0.33
RAE1P78406 SERF2-206ENST00000409291 807 ntTSL 3 BASIC13□□□□□ -0.33
RAE1P78406 OR52M2P-201ENST00000414298 959 ntBASIC13□□□□□ -0.33
RAE1P78406 AL355994.3-201ENST00000437156 466 ntTSL 2 BASIC13□□□□□ -0.33
RAE1P78406 AL161719.1-201ENST00000442716 385 ntTSL 5 BASIC13□□□□□ -0.33
RAE1P78406 ERP29P1-201ENST00000442902 706 ntBASIC13□□□□□ -0.33
RAE1P78406 AC084030.1-201ENST00000455068 561 ntTSL 4 BASIC13□□□□□ -0.33
RAE1P78406 CEP164P1-201ENST00000455142 418 ntBASIC13□□□□□ -0.33
RAE1P78406 PGAP2-212ENST00000464906 1259 ntTSL 2 BASIC13□□□□□ -0.33
RAE1P78406 PRSS3P1-201ENST00000503996 742 ntBASIC13□□□□□ -0.33
RAE1P78406 GUSBP1-202ENST00000508260 1012 ntTSL 2 BASIC13□□□□□ -0.33
RAE1P78406 SOCS2-AS1-204ENST00000551626 618 ntTSL 4 BASIC13□□□□□ -0.33
RAE1P78406 FBXL12-202ENST00000585379 956 ntTSL 2 BASIC13□□□□□ -0.33
RAE1P78406 ZNF571-AS1-204ENST00000587121 822 ntTSL 3 BASIC13□□□□□ -0.33
RAE1P78406 EXOSC5-204ENST00000596905 826 ntTSL 2 BASIC13□□□□□ -0.33
RAE1P78406 AC097724.1-201ENST00000609581 426 ntBASIC13□□□□□ -0.33
RAE1P78406 MCF2L-204ENST00000375608 3648 ntTSL 5 BASIC13□□□□□ -0.33
RAE1P78406 PLXNB1-204ENST00000456774 5859 ntAPPRIS ALT2 TSL 1 (best) BASIC13□□□□□ -0.33
RAE1P78406 PLCD4-202ENST00000417849 2738 ntAPPRIS P2 TSL 5 BASIC13□□□□□ -0.33
RAE1P78406 AC104836.1-202ENST00000636805 6041 ntAPPRIS P1 TSL 5 BASIC13□□□□□ -0.33
RAE1P78406 ELFN2-201ENST00000402918 8361 ntAPPRIS P1 TSL 4 BASIC13□□□□□ -0.33
RAE1P78406 RHOH-224ENST00000622175 2254 ntAPPRIS P1 TSL 4 BASIC13□□□□□ -0.33
RAE1P78406 PELP1-201ENST00000301396 3673 ntAPPRIS P2 TSL 1 (best) BASIC13□□□□□ -0.33
RAE1P78406 AL031687.1-201ENST00000450586 2137 ntTSL 2 BASIC13□□□□□ -0.33
RAE1P78406 TACR2-201ENST00000373306 2083 ntAPPRIS P1 TSL 1 (best) BASIC13□□□□□ -0.33
RAE1P78406 CCDC6-201ENST00000263102 5811 ntAPPRIS P1 TSL 1 (best) BASIC13□□□□□ -0.33
RAE1P78406 AC104590.1-202ENST00000558368 1921 ntBASIC13□□□□□ -0.33
RAE1P78406 UNC5CL-201ENST00000244565 3136 ntAPPRIS P1 TSL 1 (best) BASIC12.99□□□□□ -0.33
RAE1P78406 GOLGA8A-201ENST00000359187 1877 ntAPPRIS P2 TSL 1 (best) BASIC12.99□□□□□ -0.33
RAE1P78406 ITFG1-204ENST00000544001 1849 ntTSL 2 BASIC12.99□□□□□ -0.33
RAE1P78406 AC125611.4-201ENST00000553259 4166 ntTSL 2 BASIC12.99□□□□□ -0.33
RAE1P78406 NDRG2-201ENST00000298684 1784 ntTSL 1 (best) BASIC12.99□□□□□ -0.33
RAE1P78406 DDX19B-208ENST00000563392 1760 ntTSL 1 (best) BASIC12.99□□□□□ -0.33
Retrieved 100 of 98,524 protein–RNA pairs in 56.3 ms