Protein–RNA interactions for Protein: P51587

BRCA2, Breast cancer type 2 susceptibility protein, humanhuman

Predictions only

Length 3,418 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
BRCA2P51587 OR7E126P-201ENST00000526217 888 ntBASIC14.72□□□□□ -0.05
BRCA2P51587 AC130469.2-201ENST00000625112 1092 ntBASIC14.72□□□□□ -0.05
BRCA2P51587 CA10-203ENST00000451037 3189 ntAPPRIS P1 TSL 1 (best) BASIC14.72□□□□□ -0.05
BRCA2P51587 ASTN2-201ENST00000288520 2356 ntTSL 1 (best) BASIC14.72□□□□□ -0.05
BRCA2P51587 RCC2P1-201ENST00000452257 1476 ntBASIC14.72□□□□□ -0.05
BRCA2P51587 NOX5-203ENST00000448182 2498 ntAPPRIS ALT2 TSL 1 (best) BASIC14.72□□□□□ -0.05
BRCA2P51587 ZNF397-209ENST00000591206 1516 ntTSL 2 BASIC14.72□□□□□ -0.05
BRCA2P51587 SGCE-201ENST00000265735 1694 ntAPPRIS P1 TSL 1 (best) BASIC14.72□□□□□ -0.05
BRCA2P51587 HTR3D-202ENST00000382489 1674 ntAPPRIS P1 TSL 1 (best) BASIC14.72□□□□□ -0.05
BRCA2P51587 ALDOA-213ENST00000564595 1663 ntTSL 2 BASIC14.72□□□□□ -0.05
BRCA2P51587 ZNF683-205ENST00000436292 1712 ntAPPRIS ALT2 TSL 5 BASIC14.72□□□□□ -0.05
BRCA2P51587 TLN2-202ENST00000472902 2116 ntTSL 1 (best) BASIC14.72□□□□□ -0.05
BRCA2P51587 KRTAP10-10-201ENST00000380095 1100 ntAPPRIS P1 BASIC14.72□□□□□ -0.05
BRCA2P51587 AP003306.2-201ENST00000400902 485 ntTSL 4 BASIC14.72□□□□□ -0.05
BRCA2P51587 AC007322.2-201ENST00000414540 605 ntBASIC14.72□□□□□ -0.05
BRCA2P51587 AC114781.1-201ENST00000450559 1028 ntBASIC14.72□□□□□ -0.05
BRCA2P51587 AC139795.1-201ENST00000499314 838 ntTSL 5 BASIC14.72□□□□□ -0.05
BRCA2P51587 AL358215.3-201ENST00000640695 1186 ntTSL 1 (best) BASIC14.72□□□□□ -0.05
BRCA2P51587 FBXO39-201ENST00000321535 1677 ntAPPRIS P1 TSL 1 (best) BASIC14.72□□□□□ -0.05
BRCA2P51587 DDX11L1-202ENST00000456328 1657 ntTSL 1 (best) BASIC14.72□□□□□ -0.05
BRCA2P51587 DDX11L10-202ENST00000513886 1652 ntTSL 1 (best) BASIC14.72□□□□□ -0.05
BRCA2P51587 DDX11L9-203ENST00000562189 1652 ntTSL 1 (best) BASIC14.72□□□□□ -0.05
BRCA2P51587 AC004951.1-201ENST00000447643 1866 ntTSL 2 BASIC14.72□□□□□ -0.05
BRCA2P51587 CDKN1A-208ENST00000615513 2102 ntAPPRIS P1 TSL 2 BASIC14.71□□□□□ -0.05
BRCA2P51587 CEP112-202ENST00000392769 3517 ntAPPRIS P4 TSL 5 BASIC14.71□□□□□ -0.05
BRCA2P51587 ALOX15P2-201ENST00000340858 1897 ntBASIC14.71□□□□□ -0.05
BRCA2P51587 TRMT61B-201ENST00000306108 1836 ntAPPRIS P1 TSL 1 (best) BASIC14.71□□□□□ -0.05
BRCA2P51587 AP1M2-201ENST00000250244 1749 ntAPPRIS P3 TSL 1 (best) BASIC14.71□□□□□ -0.05
BRCA2P51587 KRT36-202ENST00000393986 1707 ntTSL 1 (best) BASIC14.71□□□□□ -0.05
BRCA2P51587 ERG-211ENST00000453032 1595 ntTSL 2 BASIC14.71□□□□□ -0.05
BRCA2P51587 ORC5-203ENST00000447452 1409 ntTSL 1 (best) BASIC14.71□□□□□ -0.05
BRCA2P51587 OOEP-201ENST00000370359 478 ntAPPRIS P1 TSL 1 (best) BASIC14.71□□□□□ -0.05
BRCA2P51587 HLA-DQB3-203ENST00000425319 356 ntBASIC14.71□□□□□ -0.05
BRCA2P51587 RAB34-211ENST00000450529 1184 ntTSL 2 BASIC14.71□□□□□ -0.05
BRCA2P51587 CMTM1-206ENST00000457188 765 ntAPPRIS ALT2 TSL 1 (best) BASIC14.71□□□□□ -0.05
BRCA2P51587 FLNC-AS1-201ENST00000469965 559 ntTSL 4 BASIC14.71□□□□□ -0.05
BRCA2P51587 SLC10A7-208ENST00000511374 869 ntTSL 1 (best) BASIC14.71□□□□□ -0.05
BRCA2P51587 CMTM1-215ENST00000531885 590 ntAPPRIS ALT2 TSL 1 (best) BASIC14.71□□□□□ -0.05
BRCA2P51587 MYL6-210ENST00000548400 573 ntTSL 3 BASIC14.71□□□□□ -0.05
BRCA2P51587 SNCA-204ENST00000394989 3167 ntTSL 1 (best) BASIC14.71□□□□□ -0.05
BRCA2P51587 LRIG1-202ENST00000383703 5283 ntTSL 1 (best) BASIC14.71□□□□□ -0.05
BRCA2P51587 DTD2-201ENST00000310850 2717 ntAPPRIS P1 TSL 1 (best) BASIC14.71□□□□□ -0.05
BRCA2P51587 PLCB2-204ENST00000557821 4517 ntAPPRIS ALT1 TSL 1 (best) BASIC14.71□□□□□ -0.05
BRCA2P51587 AC004623.1-201ENST00000624592 2127 ntBASIC14.71□□□□□ -0.05
BRCA2P51587 LANCL3-201ENST00000378619 3063 ntAPPRIS P1 TSL 1 (best) BASIC14.71□□□□□ -0.05
BRCA2P51587 USP5-201ENST00000229268 3181 ntAPPRIS ALT1 TSL 1 (best) BASIC14.71□□□□□ -0.05
BRCA2P51587 PGAM5-202ENST00000454808 1084 ntTSL 3 BASIC14.71□□□□□ -0.05
BRCA2P51587 PEBP1P1-201ENST00000554856 510 ntBASIC14.71□□□□□ -0.05
BRCA2P51587 IFI27L1-209ENST00000555523 680 ntAPPRIS P1 TSL 2 BASIC14.71□□□□□ -0.05
BRCA2P51587 AL356423.1-201ENST00000604953 538 ntBASIC14.71□□□□□ -0.05
BRCA2P51587 SLC25A35-201ENST00000380067 2785 ntTSL 2 BASIC14.71□□□□□ -0.06
BRCA2P51587 GSTM4-204ENST00000369836 1412 ntAPPRIS P2 TSL 1 (best) BASIC14.71□□□□□ -0.06
BRCA2P51587 LINC01837-201ENST00000590021 1320 ntTSL 5 BASIC14.7□□□□□ -0.06
BRCA2P51587 OR8B8-201ENST00000328064 1033 ntAPPRIS P1 BASIC14.7□□□□□ -0.06
BRCA2P51587 SCGB1C1-201ENST00000342878 431 ntAPPRIS P1 TSL 1 (best) BASIC14.7□□□□□ -0.06
BRCA2P51587 ANO7-203ENST00000402530 894 ntTSL 1 (best) BASIC14.7□□□□□ -0.06
BRCA2P51587 CFAP36-205ENST00000407816 1125 ntAPPRIS ALT2 TSL 5 BASIC14.7□□□□□ -0.06
BRCA2P51587 AL359094.2-201ENST00000420941 750 ntTSL 3 BASIC14.7□□□□□ -0.06
BRCA2P51587 PLA2G6-213ENST00000447598 567 ntTSL 5 BASIC14.7□□□□□ -0.06
BRCA2P51587 AC022424.2-201ENST00000514848 454 ntTSL 2 BASIC14.7□□□□□ -0.06
BRCA2P51587 AP3M2-205ENST00000517922 1094 ntTSL 2 BASIC14.7□□□□□ -0.06
BRCA2P51587 FXYD6-202ENST00000524656 1033 ntAPPRIS P2 TSL 3 BASIC14.7□□□□□ -0.06
BRCA2P51587 KCNT1-208ENST00000488444 3696 ntAPPRIS ALT2 TSL 5 BASIC14.7□□□□□ -0.06
BRCA2P51587 LINC00642-201ENST00000419459 2026 ntTSL 2 BASIC14.7□□□□□ -0.06
BRCA2P51587 CCNG1-202ENST00000393929 2366 ntAPPRIS P1 TSL 1 (best) BASIC14.7□□□□□ -0.06
BRCA2P51587 GMEB1-201ENST00000294409 1912 ntAPPRIS P4 TSL 1 (best) BASIC14.7□□□□□ -0.06
BRCA2P51587 GGPS1-203ENST00000391855 1407 ntTSL 2 BASIC14.7□□□□□ -0.06
BRCA2P51587 AL606970.2-201ENST00000434596 470 ntTSL 3 BASIC14.7□□□□□ -0.06
BRCA2P51587 AC234582.2-201ENST00000455788 568 ntTSL 3 BASIC14.7□□□□□ -0.06
BRCA2P51587 HNRNPA1P55-201ENST00000505935 955 ntBASIC14.7□□□□□ -0.06
BRCA2P51587 VEGFA-224ENST00000523873 784 ntTSL 1 (best) BASIC14.7□□□□□ -0.06
BRCA2P51587 AC015563.2-201ENST00000579580 772 ntTSL 3 BASIC14.7□□□□□ -0.06
BRCA2P51587 PSD-209ENST00000611678 3382 ntTSL 1 (best) BASIC14.7□□□□□ -0.06
BRCA2P51587 SUV39H2-201ENST00000313519 3087 ntAPPRIS P3 TSL 1 (best) BASIC14.7□□□□□ -0.06
BRCA2P51587 NDRG2-201ENST00000298684 1784 ntTSL 1 (best) BASIC14.7□□□□□ -0.06
BRCA2P51587 MED15-203ENST00000382974 2235 ntTSL 1 (best) BASIC14.7□□□□□ -0.06
BRCA2P51587 SALL3-205ENST00000575389 3996 ntTSL 5 BASIC14.7□□□□□ -0.06
BRCA2P51587 RCAN2-204ENST00000405162 2457 ntTSL 5 BASIC14.7□□□□□ -0.06
BRCA2P51587 PRSS3-203ENST00000379405 834 ntAPPRIS P1 TSL 1 (best) BASIC14.7□□□□□ -0.06
BRCA2P51587 AC104623.1-201ENST00000446357 546 ntTSL 4 BASIC14.7□□□□□ -0.06
BRCA2P51587 FTLP16-201ENST00000446400 513 ntBASIC14.7□□□□□ -0.06
BRCA2P51587 AC044839.1-201ENST00000532307 541 ntTSL 5 BASIC14.7□□□□□ -0.06
BRCA2P51587 LINC00662-204ENST00000588027 562 ntTSL 5 BASIC14.7□□□□□ -0.06
BRCA2P51587 OPN1MW-201ENST00000595290 1242 ntAPPRIS P1 TSL 1 (best) BASIC14.7□□□□□ -0.06
BRCA2P51587 MIR4726-201ENST00000615971 58 ntBASIC14.7□□□□□ -0.06
BRCA2P51587 SERPING1-213ENST00000619430 634 ntTSL 1 (best) BASIC14.7□□□□□ -0.06
BRCA2P51587 AGAP12P-201ENST00000585227 2359 ntBASIC14.7□□□□□ -0.06
BRCA2P51587 TTC39A-204ENST00000371750 2021 ntAPPRIS ALT2 TSL 1 (best) BASIC14.7□□□□□ -0.06
BRCA2P51587 RUNX3-201ENST00000308873 3861 ntAPPRIS P3 TSL 1 (best) BASIC14.7□□□□□ -0.06
BRCA2P51587 TATDN3-202ENST00000366974 2389 ntAPPRIS P3 TSL 1 (best) BASIC14.69□□□□□ -0.06
BRCA2P51587 PI4KAP2-201ENST00000360806 2080 ntBASIC14.69□□□□□ -0.06
BRCA2P51587 FAM183BP-201ENST00000409072 1595 ntBASIC14.69□□□□□ -0.06
BRCA2P51587 KIF17-203ENST00000400463 3731 ntAPPRIS ALT2 TSL 1 (best) BASIC14.69□□□□□ -0.06
BRCA2P51587 GRIK5-201ENST00000262895 3493 ntAPPRIS P1 TSL 1 (best) BASIC14.69□□□□□ -0.06
BRCA2P51587 PTPN9-201ENST00000306726 3862 ntAPPRIS ALT2 TSL 5 BASIC14.69□□□□□ -0.06
BRCA2P51587 C1QTNF3-201ENST00000231338 1959 ntAPPRIS P3 TSL 1 (best) BASIC14.69□□□□□ -0.06
BRCA2P51587 WFDC2-201ENST00000217425 356 ntTSL 1 (best) BASIC14.69□□□□□ -0.06
BRCA2P51587 HSD17B3-201ENST00000375262 984 ntTSL 1 (best) BASIC14.69□□□□□ -0.06
BRCA2P51587 LIMS2-203ENST00000409254 867 ntTSL 3 BASIC14.69□□□□□ -0.06
BRCA2P51587 ADPGK-202ENST00000456471 808 ntTSL 1 (best) BASIC14.69□□□□□ -0.06
Retrieved 100 of 98,524 protein–RNA pairs in 93.6 ms