Protein–RNA interactions for Protein: P12004

PCNA, Proliferating cell nuclear antigen, humanhuman

Predictions only

Length 261 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PCNAP12004 MSH5-202ENST00000375740 2669 ntTSL 1 (best) BASIC13.51□□□□□ -0.25
PCNAP12004 CDC20B-203ENST00000381375 2591 ntAPPRIS ALT1 TSL 1 (best) BASIC13.51□□□□□ -0.25
PCNAP12004 MANBA-202ENST00000505239 2577 ntTSL 2 BASIC13.51□□□□□ -0.25
PCNAP12004 ZDHHC15-201ENST00000373367 5796 ntAPPRIS P3 TSL 1 (best) BASIC13.51□□□□□ -0.25
PCNAP12004 DSTN-203ENST00000474024 1853 ntTSL 1 (best) BASIC13.51□□□□□ -0.25
PCNAP12004 SYT4-205ENST00000590752 1765 ntTSL 2 BASIC13.51□□□□□ -0.25
PCNAP12004 NBEA-204ENST00000400445 11119 ntAPPRIS P2 TSL 5 BASIC13.51□□□□□ -0.25
PCNAP12004 DRD3-203ENST00000460779 1557 ntAPPRIS P3 TSL 2 BASIC13.51□□□□□ -0.25
PCNAP12004 Z98885.2-201ENST00000565177 1567 ntTSL 2 BASIC13.51□□□□□ -0.25
PCNAP12004 PGAP2-227ENST00000496834 1530 ntTSL 2 BASIC13.51□□□□□ -0.25
PCNAP12004 POTEE-201ENST00000356920 4159 ntAPPRIS P1 TSL 1 (best) BASIC13.51□□□□□ -0.25
PCNAP12004 FAM167A-AS1-203ENST00000624614 1357 ntTSL 1 (best) BASIC13.51□□□□□ -0.25
PCNAP12004 FBXO32-203ENST00000517956 6744 ntAPPRIS P1 TSL 1 (best) BASIC13.51□□□□□ -0.25
PCNAP12004 RPGRIP1-202ENST00000400017 3940 ntAPPRIS P2 TSL 1 (best) BASIC13.51□□□□□ -0.25
PCNAP12004 ARF5-201ENST00000000233 1103 ntAPPRIS P1 TSL 1 (best) BASIC13.51□□□□□ -0.25
PCNAP12004 OR1J1-201ENST00000259357 969 ntAPPRIS P1 BASIC13.51□□□□□ -0.25
PCNAP12004 C3orf22-201ENST00000318225 1000 ntAPPRIS P1 TSL 1 (best) BASIC13.51□□□□□ -0.25
PCNAP12004 IP6K2-202ENST00000340879 1185 ntTSL 1 (best) BASIC13.51□□□□□ -0.25
PCNAP12004 FCRLB-202ENST00000367944 1172 ntTSL 1 (best) BASIC13.51□□□□□ -0.25
PCNAP12004 FCRLB-203ENST00000367945 1131 ntTSL 1 (best) BASIC13.51□□□□□ -0.25
PCNAP12004 HIST2H2AA3-201ENST00000369159 549 ntAPPRIS P1 BASIC13.51□□□□□ -0.25
PCNAP12004 MKX-201ENST00000375790 3846 ntAPPRIS P1 TSL 1 (best) BASIC13.51□□□□□ -0.25
PCNAP12004 KRTAP20-4-201ENST00000382828 224 ntAPPRIS P1 BASIC13.51□□□□□ -0.25
PCNAP12004 TXNRD3NB-202ENST00000383572 1131 ntAPPRIS P1 TSL 1 (best) BASIC13.51□□□□□ -0.25
PCNAP12004 LBH-202ENST00000401506 485 ntTSL 3 BASIC13.51□□□□□ -0.25
PCNAP12004 FNTAP2-201ENST00000430308 634 ntBASIC13.51□□□□□ -0.25
PCNAP12004 LINC01352-201ENST00000431347 962 ntTSL 1 (best) BASIC13.51□□□□□ -0.25
PCNAP12004 AC034228.2-201ENST00000432558 459 ntTSL 3 BASIC13.51□□□□□ -0.25
PCNAP12004 PFN2-206ENST00000461930 606 ntTSL 4 BASIC13.51□□□□□ -0.25
PCNAP12004 ARTN-209ENST00000479128 471 ntTSL 3 BASIC13.51□□□□□ -0.25
PCNAP12004 CD63-208ENST00000549117 1233 ntAPPRIS P1 TSL 3 BASIC13.51□□□□□ -0.25
PCNAP12004 LINC02285-201ENST00000557121 943 ntTSL 2 BASIC13.51□□□□□ -0.25
PCNAP12004 DBNDD1-206ENST00000568838 993 ntTSL 2 BASIC13.51□□□□□ -0.25
PCNAP12004 RN7SL455P-201ENST00000580629 282 ntBASIC13.51□□□□□ -0.25
PCNAP12004 HIST2H2AA4-201ENST00000607355 564 ntAPPRIS P1 BASIC13.51□□□□□ -0.25
PCNAP12004 TMEM211-203ENST00000640159 1122 ntAPPRIS P1 TSL 5 BASIC13.51□□□□□ -0.25
PCNAP12004 POLD1-210ENST00000599857 3435 ntAPPRIS P1 TSL 1 (best) BASIC13.51□□□□□ -0.25
PCNAP12004 RASA4-203ENST00000461209 3244 ntTSL 2 BASIC13.51□□□□□ -0.25
PCNAP12004 WDR81-205ENST00000437219 3184 ntTSL 2 BASIC13.51□□□□□ -0.25
PCNAP12004 CAMKK2-204ENST00000392473 2967 ntAPPRIS ALT2 TSL 1 (best) BASIC13.51□□□□□ -0.25
PCNAP12004 DMAC1-201ENST00000358227 2755 ntAPPRIS P1 TSL 1 (best) BASIC13.51□□□□□ -0.25
PCNAP12004 SCAF4-201ENST00000286835 4193 ntAPPRIS P3 TSL 1 (best) BASIC13.51□□□□□ -0.25
PCNAP12004 DCST2-202ENST00000368424 2392 ntAPPRIS P1 TSL 1 (best) BASIC13.51□□□□□ -0.25
PCNAP12004 POC5-202ENST00000428202 2229 ntAPPRIS P1 TSL 1 (best) BASIC13.51□□□□□ -0.25
PCNAP12004 EPB42-210ENST00000622454 2227 ntTSL 1 (best) BASIC13.51□□□□□ -0.25
PCNAP12004 ARSD-202ENST00000381154 5159 ntAPPRIS P1 TSL 1 (best) BASIC13.51□□□□□ -0.25
PCNAP12004 AP3M2-207ENST00000518421 3669 ntAPPRIS P1 TSL 1 (best) BASIC13.51□□□□□ -0.25
PCNAP12004 DLGAP1-202ENST00000400145 2188 ntTSL 1 (best) BASIC13.51□□□□□ -0.25
PCNAP12004 ANKRD11-201ENST00000301030 9301 ntAPPRIS P2 TSL 5 BASIC13.51□□□□□ -0.25
PCNAP12004 AGAP2-203ENST00000547588 3579 ntAPPRIS ALT2 TSL 1 (best) BASIC13.51□□□□□ -0.25
PCNAP12004 GMPR2-206ENST00000557854 2025 ntTSL 1 (best) BASIC13.51□□□□□ -0.25
PCNAP12004 CRY2-212ENST00000616623 4204 ntAPPRIS P2 TSL 1 (best) BASIC13.5□□□□□ -0.25
PCNAP12004 TUBB8-206ENST00000568584 1790 ntAPPRIS P1 TSL 1 (best) BASIC13.5□□□□□ -0.25
PCNAP12004 ZMIZ1-AS1-203ENST00000456353 2878 ntTSL 2 BASIC13.5□□□□□ -0.25
PCNAP12004 AC010255.3-203ENST00000509403 1727 ntAPPRIS P1 TSL 2 BASIC13.5□□□□□ -0.25
PCNAP12004 PTPN5-205ENST00000477854 2826 ntTSL 5 BASIC13.5□□□□□ -0.25
PCNAP12004 TXLNA-201ENST00000373609 5012 ntAPPRIS P1 TSL 1 (best) BASIC13.5□□□□□ -0.25
PCNAP12004 AC093462.1-201ENST00000621167 1683 ntBASIC13.5□□□□□ -0.25
PCNAP12004 RNF214-201ENST00000300650 2755 ntAPPRIS P1 TSL 1 (best) BASIC13.5□□□□□ -0.25
PCNAP12004 NME1-209ENST00000511355 1645 ntTSL 5 BASIC13.5□□□□□ -0.25
PCNAP12004 KCNIP1-210ENST00000636734 1613 ntTSL 5 BASIC13.5□□□□□ -0.25
PCNAP12004 DAXX-201ENST00000266000 2606 ntAPPRIS P2 TSL 1 (best) BASIC13.5□□□□□ -0.25
PCNAP12004 NR4A2-209ENST00000426264 2642 ntTSL 1 (best) BASIC13.5□□□□□ -0.25
PCNAP12004 SERPINF1-201ENST00000254722 1548 ntAPPRIS P1 TSL 1 (best) BASIC13.5□□□□□ -0.25
PCNAP12004 MSRA-201ENST00000317173 1536 ntAPPRIS P1 TSL 1 (best) BASIC13.5□□□□□ -0.25
PCNAP12004 OARD1-203ENST00000463088 1515 ntAPPRIS P1 TSL 2 BASIC13.5□□□□□ -0.25
PCNAP12004 ZIK1-201ENST00000307468 2510 ntTSL 1 (best) BASIC13.5□□□□□ -0.25
PCNAP12004 ST5-256ENST00000534127 4545 ntAPPRIS P4 TSL 1 (best) BASIC13.5□□□□□ -0.25
PCNAP12004 CDCA7-203ENST00000410019 1488 ntTSL 2 BASIC13.5□□□□□ -0.25
PCNAP12004 COX4I1-208ENST00000564903 1481 ntTSL 2 BASIC13.5□□□□□ -0.25
PCNAP12004 PIK3R5-220ENST00000623421 4318 ntTSL 1 (best) BASIC13.5□□□□□ -0.25
PCNAP12004 ANXA6-202ENST00000377751 1430 ntTSL 2 BASIC13.5□□□□□ -0.25
PCNAP12004 MEST-204ENST00000393187 2380 ntAPPRIS ALT1 TSL 5 BASIC13.5□□□□□ -0.25
PCNAP12004 TCF23-201ENST00000296096 4882 ntAPPRIS P1 TSL 1 (best) BASIC13.5□□□□□ -0.25
PCNAP12004 TUBBP5-203ENST00000508529 1334 ntBASIC13.5□□□□□ -0.25
PCNAP12004 HMGN3-201ENST00000275036 831 ntTSL 1 (best) BASIC13.5□□□□□ -0.25
PCNAP12004 YIPF7-201ENST00000332990 937 ntTSL 5 BASIC13.5□□□□□ -0.25
PCNAP12004 HMGN3-202ENST00000344726 872 ntAPPRIS P1 TSL 1 (best) BASIC13.5□□□□□ -0.25
PCNAP12004 CLIC1-206ENST00000375779 1127 ntAPPRIS P1 TSL 5 BASIC13.5□□□□□ -0.25
PCNAP12004 ESD-202ENST00000378720 1192 ntAPPRIS P1 TSL 1 (best) BASIC13.5□□□□□ -0.25
PCNAP12004 C1orf159-201ENST00000379319 1097 ntAPPRIS P3 TSL 5 BASIC13.5□□□□□ -0.25
PCNAP12004 TEX33-202ENST00000402860 986 ntAPPRIS P3 TSL 1 (best) BASIC13.5□□□□□ -0.25
PCNAP12004 BX679664.3-201ENST00000414070 555 ntBASIC13.5□□□□□ -0.25
PCNAP12004 ACTG1P2-201ENST00000415776 1125 ntBASIC13.5□□□□□ -0.25
PCNAP12004 ACTG1P11-201ENST00000425411 1125 ntBASIC13.5□□□□□ -0.25
PCNAP12004 AC016723.1-201ENST00000430546 633 ntTSL 3 BASIC13.5□□□□□ -0.25
PCNAP12004 AC113935.1-201ENST00000471722 555 ntBASIC13.5□□□□□ -0.25
PCNAP12004 SLC25A15P3-201ENST00000505530 290 ntBASIC13.5□□□□□ -0.25
PCNAP12004 MRPL36-204ENST00000508987 686 ntAPPRIS P1 TSL 2 BASIC13.5□□□□□ -0.25
PCNAP12004 CATSPERZ-203ENST00000539943 917 ntAPPRIS ALT2 TSL 2 BASIC13.5□□□□□ -0.25
PCNAP12004 EIF2B1-205ENST00000539951 848 ntTSL 5 BASIC13.5□□□□□ -0.25
PCNAP12004 CMTM3-215ENST00000568477 687 ntTSL 3 BASIC13.5□□□□□ -0.25
PCNAP12004 TSR1-204ENST00000576112 1290 ntTSL 5 BASIC13.5□□□□□ -0.25
PCNAP12004 C19orf70-204ENST00000587950 655 ntTSL 2 BASIC13.5□□□□□ -0.25
PCNAP12004 AL445288.1-201ENST00000610846 654 ntTSL 4 BASIC13.5□□□□□ -0.25
PCNAP12004 ANXA8L1-206ENST00000619162 1109 ntAPPRIS P1 TSL 1 (best) BASIC13.5□□□□□ -0.25
PCNAP12004 HJURP-207ENST00000441687 2934 ntAPPRIS ALT2 TSL 2 BASIC13.5□□□□□ -0.25
PCNAP12004 AP000437.1-201ENST00000624057 2085 ntBASIC13.5□□□□□ -0.25
PCNAP12004 HERC5-201ENST00000264350 3513 ntAPPRIS P1 TSL 1 (best) BASIC13.5□□□□□ -0.25
PCNAP12004 TMOD1-201ENST00000259365 3343 ntAPPRIS P1 TSL 1 (best) BASIC13.5□□□□□ -0.25
Retrieved 100 of 98,524 protein–RNA pairs in 48.1 ms