Protein–RNA interactions for Protein: A0A096LP49

CCDC187, Coiled-coil domain-containing protein 187, humanhuman

Predictions only

Length 1,063 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC187A0A096LP49 ZNF790-207ENST00000614179 2361 ntAPPRIS P1 TSL 3 BASIC12.98□□□□□ -0.33
CCDC187A0A096LP49 FHDC1-202ENST00000511601 6583 ntAPPRIS P1 TSL 5 BASIC12.98□□□□□ -0.33
CCDC187A0A096LP49 SLC1A7-206ENST00000620347 2873 ntAPPRIS ALT2 TSL 1 (best) BASIC12.98□□□□□ -0.33
CCDC187A0A096LP49 NEAT1-201ENST00000499732 1811 ntTSL 2 BASIC12.98□□□□□ -0.33
CCDC187A0A096LP49 COX8A-201ENST00000314133 507 ntAPPRIS P1 TSL 1 (best) BASIC12.98□□□□□ -0.33
CCDC187A0A096LP49 TRPM3-205ENST00000361823 1260 ntTSL 1 (best) BASIC12.98□□□□□ -0.33
CCDC187A0A096LP49 BPIFA4P-201ENST00000375465 1203 ntTSL 1 (best) BASIC12.98□□□□□ -0.33
CCDC187A0A096LP49 C6orf48-202ENST00000375635 610 ntAPPRIS P1 TSL 2 BASIC12.98□□□□□ -0.33
CCDC187A0A096LP49 SH3BGR-202ENST00000380631 780 ntTSL 5 BASIC12.98□□□□□ -0.33
CCDC187A0A096LP49 ACOT6-201ENST00000381139 1004 ntAPPRIS P1 TSL 1 (best) BASIC12.98□□□□□ -0.33
CCDC187A0A096LP49 C6orf48-209ENST00000395789 952 ntAPPRIS P1 TSL 3 BASIC12.98□□□□□ -0.33
CCDC187A0A096LP49 KRT18P33-201ENST00000398525 1043 ntBASIC12.98□□□□□ -0.33
CCDC187A0A096LP49 TOMM5-203ENST00000401811 789 ntTSL 2 BASIC12.98□□□□□ -0.33
CCDC187A0A096LP49 SDCBP2P1-201ENST00000416115 614 ntBASIC12.98□□□□□ -0.33
CCDC187A0A096LP49 CORO1C-203ENST00000421578 1296 ntTSL 2 BASIC12.98□□□□□ -0.33
CCDC187A0A096LP49 HNRNPA1P10-201ENST00000444945 962 ntBASIC12.98□□□□□ -0.33
CCDC187A0A096LP49 AC098820.2-201ENST00000457694 666 ntTSL 5 BASIC12.98□□□□□ -0.33
CCDC187A0A096LP49 NDUFB2P1-201ENST00000506966 295 ntBASIC12.98□□□□□ -0.33
CCDC187A0A096LP49 SMIM15-202ENST00000507416 584 ntAPPRIS P1 TSL 2 BASIC12.98□□□□□ -0.33
CCDC187A0A096LP49 SRPK2P-201ENST00000523408 1100 ntBASIC12.98□□□□□ -0.33
CCDC187A0A096LP49 METTL7AP1-201ENST00000547343 496 ntBASIC12.98□□□□□ -0.33
CCDC187A0A096LP49 AC007298.2-201ENST00000551849 862 ntTSL 3 BASIC12.98□□□□□ -0.33
CCDC187A0A096LP49 AF111169.3-201ENST00000553991 756 ntTSL 5 BASIC12.98□□□□□ -0.33
CCDC187A0A096LP49 TCL1A-209ENST00000557043 980 ntTSL 3 BASIC12.98□□□□□ -0.33
CCDC187A0A096LP49 AC132812.1-201ENST00000583145 892 ntBASIC12.98□□□□□ -0.33
CCDC187A0A096LP49 AL590094.1-208ENST00000636917 627 ntTSL 5 BASIC12.98□□□□□ -0.33
CCDC187A0A096LP49 CRYBG1-204ENST00000633556 9909 ntAPPRIS ALT2 TSL 5 BASIC12.98□□□□□ -0.33
CCDC187A0A096LP49 MAGEA4-201ENST00000276344 1724 ntAPPRIS P1 TSL 2 BASIC12.98□□□□□ -0.33
CCDC187A0A096LP49 INPPL1-213ENST00000541756 4649 ntTSL 5 BASIC12.98□□□□□ -0.33
CCDC187A0A096LP49 PPRC1-203ENST00000413464 4580 ntTSL 2 BASIC12.98□□□□□ -0.33
CCDC187A0A096LP49 ELAC2-201ENST00000338034 3148 ntAPPRIS P1 TSL 1 (best) BASIC12.98□□□□□ -0.33
CCDC187A0A096LP49 WAC-AS1-202ENST00000528337 2608 ntTSL 1 (best) BASIC12.98□□□□□ -0.33
CCDC187A0A096LP49 RSPRY1-202ENST00000537866 3586 ntAPPRIS P1 TSL 2 BASIC12.98□□□□□ -0.33
CCDC187A0A096LP49 RNF222-202ENST00000399398 3062 ntAPPRIS P1 TSL 5 BASIC12.98□□□□□ -0.33
CCDC187A0A096LP49 DFNA5-201ENST00000342947 2590 ntAPPRIS P1 TSL 1 (best) BASIC12.98□□□□□ -0.33
CCDC187A0A096LP49 WASF3-202ENST00000361042 4823 ntTSL 1 (best) BASIC12.98□□□□□ -0.33
CCDC187A0A096LP49 MBD4-201ENST00000249910 2470 ntAPPRIS P3 TSL 1 (best) BASIC12.98□□□□□ -0.33
CCDC187A0A096LP49 SYP-201ENST00000263233 2498 ntAPPRIS P1 TSL 1 (best) BASIC12.98□□□□□ -0.33
CCDC187A0A096LP49 EDN1-201ENST00000379375 2033 ntAPPRIS P1 TSL 1 (best) BASIC12.98□□□□□ -0.33
CCDC187A0A096LP49 ZBED8-202ENST00000523213 2484 ntAPPRIS P1 TSL 1 (best) BASIC12.98□□□□□ -0.33
CCDC187A0A096LP49 GOLGA8EP-201ENST00000530246 1959 ntBASIC12.98□□□□□ -0.33
CCDC187A0A096LP49 FHOD3-201ENST00000257209 4967 ntAPPRIS P3 TSL 1 (best) BASIC12.98□□□□□ -0.33
CCDC187A0A096LP49 TMBIM6-217ENST00000549385 2771 ntAPPRIS P3 TSL 5 BASIC12.98□□□□□ -0.33
CCDC187A0A096LP49 KRT37-201ENST00000225550 1475 ntAPPRIS P1 TSL 1 (best) BASIC12.97□□□□□ -0.33
CCDC187A0A096LP49 TTLL10-AS1-201ENST00000379317 3532 ntTSL 2 BASIC12.97□□□□□ -0.33
CCDC187A0A096LP49 UPB1-201ENST00000326010 2290 ntAPPRIS P1 TSL 1 (best) BASIC12.97□□□□□ -0.33
CCDC187A0A096LP49 EPM2A-218ENST00000639465 2203 ntTSL 5 BASIC12.97□□□□□ -0.33
CCDC187A0A096LP49 CAB39-201ENST00000258418 3826 ntAPPRIS P1 TSL 1 (best) BASIC12.97□□□□□ -0.33
CCDC187A0A096LP49 ARHGEF26-AS1-204ENST00000491862 2598 ntTSL 1 (best) BASIC12.97□□□□□ -0.33
CCDC187A0A096LP49 SLC34A2-203ENST00000504570 2162 ntAPPRIS ALT2 TSL 1 (best) BASIC12.97□□□□□ -0.33
CCDC187A0A096LP49 LINC00205-201ENST00000433465 1391 ntTSL 3 BASIC12.97□□□□□ -0.33
CCDC187A0A096LP49 UMODL1-203ENST00000400424 5516 ntAPPRIS ALT2 TSL 1 (best) BASIC12.97□□□□□ -0.33
CCDC187A0A096LP49 TTC8-203ENST00000346301 2058 ntTSL 1 (best) BASIC12.97□□□□□ -0.33
CCDC187A0A096LP49 AL365205.1-204ENST00000359201 2098 ntAPPRIS P1 TSL 1 (best) BASIC12.97□□□□□ -0.33
CCDC187A0A096LP49 TTC7A-202ENST00000394850 4306 ntTSL 1 (best) BASIC12.97□□□□□ -0.33
CCDC187A0A096LP49 BAIAP3-202ENST00000397488 4583 ntTSL 1 (best) BASIC12.97□□□□□ -0.33
CCDC187A0A096LP49 CTSL-202ENST00000342020 933 ntTSL 2 BASIC12.97□□□□□ -0.33
CCDC187A0A096LP49 NUDT2-201ENST00000346365 960 ntAPPRIS P1 TSL 1 (best) BASIC12.97□□□□□ -0.33
CCDC187A0A096LP49 UBIAD1-201ENST00000376804 825 ntTSL 2 BASIC12.97□□□□□ -0.33
CCDC187A0A096LP49 NUDT2-202ENST00000379155 1002 ntAPPRIS P1 TSL 3 BASIC12.97□□□□□ -0.33
CCDC187A0A096LP49 MIR632-201ENST00000385193 94 ntBASIC12.97□□□□□ -0.33
CCDC187A0A096LP49 TRBV5-7-201ENST00000390378 343 ntAPPRIS P1 BASIC12.97□□□□□ -0.33
CCDC187A0A096LP49 FRGCA-201ENST00000424933 422 ntTSL 3 BASIC12.97□□□□□ -0.33
CCDC187A0A096LP49 HLA-W-207ENST00000439514 771 ntBASIC12.97□□□□□ -0.33
CCDC187A0A096LP49 FABP5P3-202ENST00000477993 1027 ntTSL 5 BASIC12.97□□□□□ -0.33
CCDC187A0A096LP49 RPL29P2-202ENST00000498671 657 ntBASIC12.97□□□□□ -0.33
CCDC187A0A096LP49 EVX1-AS-203ENST00000519218 554 ntTSL 4 BASIC12.97□□□□□ -0.33
CCDC187A0A096LP49 OR4A49P-201ENST00000527050 632 ntBASIC12.97□□□□□ -0.33
CCDC187A0A096LP49 ZNF816-208ENST00000535506 529 ntTSL 4 BASIC12.97□□□□□ -0.33
CCDC187A0A096LP49 SLC25A3-206ENST00000547534 556 ntTSL 2 BASIC12.97□□□□□ -0.33
CCDC187A0A096LP49 RN7SL480P-201ENST00000581481 294 ntBASIC12.97□□□□□ -0.33
CCDC187A0A096LP49 HAMP-203ENST00000598398 652 ntAPPRIS P1 TSL 2 BASIC12.97□□□□□ -0.33
CCDC187A0A096LP49 NUDT2-204ENST00000618590 825 ntAPPRIS P1 TSL 3 BASIC12.97□□□□□ -0.33
CCDC187A0A096LP49 AC020904.3-201ENST00000624199 442 ntBASIC12.97□□□□□ -0.33
CCDC187A0A096LP49 GSTT2-203ENST00000634759 1184 ntAPPRIS P1 TSL 1 (best) BASIC12.97□□□□□ -0.33
CCDC187A0A096LP49 IQSEC2-207ENST00000638583 722 ntTSL 5 BASIC12.97□□□□□ -0.33
CCDC187A0A096LP49 HTR7-203ENST00000371719 3033 ntAPPRIS ALT1 TSL 1 (best) BASIC12.97□□□□□ -0.33
CCDC187A0A096LP49 ASTN2-206ENST00000361477 4001 ntTSL 5 BASIC12.97□□□□□ -0.33
CCDC187A0A096LP49 AC245140.2-201ENST00000624054 1939 ntBASIC12.97□□□□□ -0.33
CCDC187A0A096LP49 UBE2V1-224ENST00000625172 2297 ntTSL 4 BASIC12.97□□□□□ -0.33
CCDC187A0A096LP49 AC092506.1-201ENST00000634580 2275 ntTSL 5 BASIC12.97□□□□□ -0.33
CCDC187A0A096LP49 MAGIX-208ENST00000616266 3295 ntAPPRIS ALT2 TSL 5 BASIC12.97□□□□□ -0.33
CCDC187A0A096LP49 CYP26A1-202ENST00000371531 2245 ntTSL 2 BASIC12.97□□□□□ -0.33
CCDC187A0A096LP49 TRAF1-201ENST00000373887 6324 ntAPPRIS P1 TSL 1 (best) BASIC12.97□□□□□ -0.33
CCDC187A0A096LP49 YIPF1-201ENST00000072644 1858 ntAPPRIS P1 TSL 1 (best) BASIC12.97□□□□□ -0.33
CCDC187A0A096LP49 SOX7-201ENST00000304501 3216 ntAPPRIS P1 TSL 1 (best) BASIC12.97□□□□□ -0.33
CCDC187A0A096LP49 HTD2-205ENST00000477305 1531 ntAPPRIS P1 TSL 5 BASIC12.97□□□□□ -0.33
CCDC187A0A096LP49 LINC00967-203ENST00000518035 1502 ntTSL 2 BASIC12.97□□□□□ -0.33
CCDC187A0A096LP49 ZFYVE28-201ENST00000290974 4131 ntAPPRIS P3 TSL 1 (best) BASIC12.97□□□□□ -0.33
CCDC187A0A096LP49 UBBP4-202ENST00000584755 1459 ntTSL 1 (best) BASIC12.97□□□□□ -0.33
CCDC187A0A096LP49 DKFZP434A062-201ENST00000573103 5021 ntBASIC12.97□□□□□ -0.33
CCDC187A0A096LP49 NIN-202ENST00000324330 4364 ntTSL 5 BASIC12.97□□□□□ -0.33
CCDC187A0A096LP49 AC079781.5-202ENST00000641784 3743 ntBASIC12.97□□□□□ -0.33
CCDC187A0A096LP49 CRLS1-201ENST00000378863 3958 ntAPPRIS P1 TSL 1 (best) BASIC12.96□□□□□ -0.33
CCDC187A0A096LP49 CCNG2-202ENST00000395640 1410 ntAPPRIS P1 TSL 1 (best) BASIC12.96□□□□□ -0.33
CCDC187A0A096LP49 HIPK3-201ENST00000303296 7408 ntTSL 5 BASIC12.96□□□□□ -0.33
CCDC187A0A096LP49 TDRD12-202ENST00000444215 3934 ntAPPRIS P1 TSL 1 (best) BASIC12.96□□□□□ -0.33
CCDC187A0A096LP49 CR383656.2-201ENST00000548656 2254 ntBASIC12.96□□□□□ -0.33
CCDC187A0A096LP49 PCNX4-203ENST00000406854 4666 ntAPPRIS ALT2 TSL 5 BASIC12.96□□□□□ -0.33
CCDC187A0A096LP49 NAPEPLD-201ENST00000341533 4972 ntAPPRIS P1 TSL 1 (best) BASIC12.96□□□□□ -0.33
Retrieved 100 of 98,524 protein–RNA pairs in 48.1 ms