Protein–RNA interactions for Protein: Q9Y6A9

SPCS1, Signal peptidase complex subunit 1, humanhuman

Predictions only

Length 102 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SPCS1Q9Y6A9 HOXC6-202ENST00000394331 2943 ntTSL 1 (best) BASIC15.39■□□□□ 0.05
SPCS1Q9Y6A9 CNTFR-202ENST00000378980 2052 ntAPPRIS P1 TSL 1 (best) BASIC15.39■□□□□ 0.05
SPCS1Q9Y6A9 CHRNA4-201ENST00000370263 5577 ntAPPRIS P1 TSL 1 (best) BASIC15.38■□□□□ 0.05
SPCS1Q9Y6A9 GRB10-208ENST00000403097 5432 ntTSL 1 (best) BASIC15.38■□□□□ 0.05
SPCS1Q9Y6A9 SAE1-209ENST00000598840 1831 ntTSL 5 BASIC15.38■□□□□ 0.05
SPCS1Q9Y6A9 XKR6-203ENST00000416569 3382 ntAPPRIS P1 TSL 1 (best) BASIC15.38■□□□□ 0.05
SPCS1Q9Y6A9 DACT1-204ENST00000541264 2610 ntAPPRIS ALT2 TSL 2 BASIC15.38■□□□□ 0.05
SPCS1Q9Y6A9 CSPG5-202ENST00000383738 4161 ntAPPRIS ALT2 TSL 1 (best) BASIC15.38■□□□□ 0.05
SPCS1Q9Y6A9 BHLHE22-201ENST00000321870 3262 ntAPPRIS P1 BASIC15.38■□□□□ 0.05
SPCS1Q9Y6A9 ZNF385B-204ENST00000410066 3288 ntAPPRIS P1 TSL 1 (best) BASIC15.38■□□□□ 0.05
SPCS1Q9Y6A9 BOK-201ENST00000318407 2657 ntAPPRIS P1 TSL 1 (best) BASIC15.38■□□□□ 0.05
SPCS1Q9Y6A9 MVB12A-201ENST00000317040 2223 ntAPPRIS P1 TSL 1 (best) BASIC15.38■□□□□ 0.05
SPCS1Q9Y6A9 FBXO41-205ENST00000521871 7336 ntAPPRIS P1 TSL 5 BASIC15.38■□□□□ 0.05
SPCS1Q9Y6A9 BATF3-201ENST00000243440 980 ntAPPRIS P1 TSL 1 (best) BASIC15.38■□□□□ 0.05
SPCS1Q9Y6A9 RETREG2-203ENST00000430297 4618 ntAPPRIS P1 TSL 1 (best) BASIC15.38■□□□□ 0.05
SPCS1Q9Y6A9 ARNT-202ENST00000358595 4887 ntAPPRIS P3 TSL 1 (best) BASIC15.38■□□□□ 0.05
SPCS1Q9Y6A9 DISC1-215ENST00000602281 2761 ntAPPRIS ALT2 TSL 1 (best) BASIC15.38■□□□□ 0.05
SPCS1Q9Y6A9 KLF14-201ENST00000583337 2827 ntAPPRIS P1 BASIC15.38■□□□□ 0.05
SPCS1Q9Y6A9 CHRNB2-205ENST00000637900 2390 ntAPPRIS ALT1 TSL 5 BASIC15.38■□□□□ 0.05
SPCS1Q9Y6A9 DNAAF3-207ENST00000527223 2228 ntAPPRIS ALT2 TSL 2 BASIC15.37■□□□□ 0.05
SPCS1Q9Y6A9 ADAD2-201ENST00000268624 2283 ntAPPRIS P3 TSL 2 BASIC15.37■□□□□ 0.05
SPCS1Q9Y6A9 C14orf80-201ENST00000329886 1947 ntAPPRIS ALT2 TSL 1 (best) BASIC15.37■□□□□ 0.05
SPCS1Q9Y6A9 GATA2-AS1-202ENST00000468377 1578 ntTSL 2 BASIC15.37■□□□□ 0.05
SPCS1Q9Y6A9 TAL1-202ENST00000371884 4642 ntAPPRIS P1 TSL 1 (best) BASIC15.37■□□□□ 0.05
SPCS1Q9Y6A9 DISC1-213ENST00000537876 2349 ntAPPRIS ALT2 TSL 2 BASIC15.37■□□□□ 0.05
SPCS1Q9Y6A9 NIPSNAP2-201ENST00000322090 1999 ntAPPRIS P1 TSL 1 (best) BASIC15.37■□□□□ 0.05
SPCS1Q9Y6A9 KMT5B-201ENST00000304363 5837 ntAPPRIS P1 TSL 5 BASIC15.37■□□□□ 0.05
SPCS1Q9Y6A9 INO80B-203ENST00000409917 796 ntTSL 2 BASIC15.37■□□□□ 0.05
SPCS1Q9Y6A9 NUP153-202ENST00000537253 6030 ntAPPRIS ALT2 TSL 2 BASIC15.37■□□□□ 0.05
SPCS1Q9Y6A9 WWC3-201ENST00000380861 6647 ntAPPRIS P1 TSL 1 (best) BASIC15.37■□□□□ 0.05
SPCS1Q9Y6A9 ASCL5-201ENST00000449188 2026 ntAPPRIS P1 TSL 3 BASIC15.37■□□□□ 0.05
SPCS1Q9Y6A9 RALGAPA1-219ENST00000637992 8512 ntTSL 5 BASIC15.37■□□□□ 0.05
SPCS1Q9Y6A9 ARID1B-203ENST00000350026 7962 ntAPPRIS P3 TSL 1 (best) BASIC15.37■□□□□ 0.05
SPCS1Q9Y6A9 SEPT4-205ENST00000426861 1906 ntTSL 1 (best) BASIC15.37■□□□□ 0.05
SPCS1Q9Y6A9 LINC00094-201ENST00000432807 2300 ntAPPRIS ALT2 TSL 2 BASIC15.37■□□□□ 0.05
SPCS1Q9Y6A9 OBSL1-203ENST00000373876 5503 ntTSL 5 BASIC15.36■□□□□ 0.05
SPCS1Q9Y6A9 CASR-204ENST00000638421 5088 ntAPPRIS P1 TSL 5 BASIC15.36■□□□□ 0.05
SPCS1Q9Y6A9 P4HTM-201ENST00000343546 2268 ntTSL 1 (best) BASIC15.36■□□□□ 0.05
SPCS1Q9Y6A9 OSCAR-201ENST00000284648 2055 ntAPPRIS ALT2 TSL 1 (best) BASIC15.36■□□□□ 0.05
SPCS1Q9Y6A9 SMPD3-201ENST00000219334 5453 ntAPPRIS P1 TSL 1 (best) BASIC15.36■□□□□ 0.05
SPCS1Q9Y6A9 CYP21A2-222ENST00000435122 1914 ntTSL 2 BASIC15.36■□□□□ 0.05
SPCS1Q9Y6A9 BRSK1-201ENST00000309383 3079 ntAPPRIS P1 TSL 1 (best) BASIC15.36■□□□□ 0.05
SPCS1Q9Y6A9 AC138696.1-201ENST00000522452 2897 ntAPPRIS P1 TSL 1 (best) BASIC15.36■□□□□ 0.05
SPCS1Q9Y6A9 HEY2-201ENST00000368364 2678 ntAPPRIS P1 TSL 1 (best) BASIC15.36■□□□□ 0.05
SPCS1Q9Y6A9 AZIN1-201ENST00000337198 4721 ntAPPRIS P1 TSL 1 (best) BASIC15.36■□□□□ 0.05
SPCS1Q9Y6A9 AL157384.1-201ENST00000445995 2473 ntBASIC15.36■□□□□ 0.05
SPCS1Q9Y6A9 PRKAR1B-212ENST00000544935 2494 ntAPPRIS P1 TSL 5 BASIC15.36■□□□□ 0.05
SPCS1Q9Y6A9 RAB1A-204ENST00000409892 2254 ntTSL 2 BASIC15.36■□□□□ 0.05
SPCS1Q9Y6A9 YIPF2-201ENST00000253031 2087 ntAPPRIS P1 TSL 1 (best) BASIC15.36■□□□□ 0.05
SPCS1Q9Y6A9 PLPP5-203ENST00000424479 2130 ntAPPRIS P1 TSL 1 (best) BASIC15.35■□□□□ 0.05
SPCS1Q9Y6A9 POLR2F-205ENST00000442738 2106 ntAPPRIS P1 TSL 1 (best) BASIC15.35■□□□□ 0.05
SPCS1Q9Y6A9 PTGER2-201ENST00000245457 2383 ntAPPRIS P1 TSL 1 (best) BASIC15.35■□□□□ 0.05
SPCS1Q9Y6A9 GABRA2-214ENST00000515082 2366 ntTSL 1 (best) BASIC15.35■□□□□ 0.05
SPCS1Q9Y6A9 ADCK2-201ENST00000072869 2377 ntAPPRIS P1 TSL 1 (best) BASIC15.35■□□□□ 0.05
SPCS1Q9Y6A9 NEU4-204ENST00000405370 1907 ntAPPRIS P1 TSL 1 (best) BASIC15.35■□□□□ 0.05
SPCS1Q9Y6A9 AC092490.1-203ENST00000514568 1972 ntTSL 1 (best) BASIC15.35■□□□□ 0.05
SPCS1Q9Y6A9 CCDC185-201ENST00000366875 2054 ntAPPRIS P1 BASIC15.35■□□□□ 0.05
SPCS1Q9Y6A9 ANOS2P-203ENST00000472227 1816 ntBASIC15.35■□□□□ 0.05
SPCS1Q9Y6A9 METRNL-203ENST00000571814 1900 ntTSL 1 (best) BASIC15.35■□□□□ 0.05
SPCS1Q9Y6A9 PTPRE-201ENST00000254667 5331 ntAPPRIS P1 TSL 1 (best) BASIC15.35■□□□□ 0.05
SPCS1Q9Y6A9 PAX1-201ENST00000398485 2838 ntAPPRIS P3 TSL 5 BASIC15.35■□□□□ 0.05
SPCS1Q9Y6A9 LIN54-209ENST00000510557 2257 ntTSL 2 BASIC15.34■□□□□ 0.05
SPCS1Q9Y6A9 OSCAR-209ENST00000616215 2016 ntAPPRIS ALT2 TSL 5 BASIC15.34■□□□□ 0.05
SPCS1Q9Y6A9 KRT3-201ENST00000417996 2319 ntAPPRIS P1 TSL 1 (best) BASIC15.34■□□□□ 0.05
SPCS1Q9Y6A9 FAM206A-201ENST00000322940 2134 ntAPPRIS P1 TSL 1 (best) BASIC15.34■□□□□ 0.05
SPCS1Q9Y6A9 PAQR6-202ENST00000335852 2117 ntTSL 2 BASIC15.34■□□□□ 0.05
SPCS1Q9Y6A9 ST7L-201ENST00000343210 1866 ntAPPRIS P1 TSL 1 (best) BASIC15.34■□□□□ 0.05
SPCS1Q9Y6A9 LTBP4-201ENST00000204005 5032 ntAPPRIS ALT2 TSL 1 (best) BASIC15.34■□□□□ 0.05
SPCS1Q9Y6A9 LARGE2-202ENST00000401752 2516 ntAPPRIS P3 TSL 1 (best) BASIC15.34■□□□□ 0.05
SPCS1Q9Y6A9 ANO8-204ENST00000630631 1905 ntTSL 5 BASIC15.34■□□□□ 0.05
SPCS1Q9Y6A9 BDH1-207ENST00000441275 1605 ntTSL 5 BASIC15.34■□□□□ 0.05
SPCS1Q9Y6A9 DVL1-204ENST00000610709 2268 ntTSL 2 BASIC15.34■□□□□ 0.05
SPCS1Q9Y6A9 ACBD4-214ENST00000591859 1998 ntTSL 1 (best) BASIC15.34■□□□□ 0.05
SPCS1Q9Y6A9 DTWD2-203ENST00000510708 2307 ntAPPRIS P1 TSL 1 (best) BASIC15.34■□□□□ 0.05
SPCS1Q9Y6A9 METRN-204ENST00000568223 3325 ntAPPRIS P2 TSL 1 (best) BASIC15.34■□□□□ 0.05
SPCS1Q9Y6A9 PGRMC2-201ENST00000296425 2767 ntAPPRIS P1 TSL 1 (best) BASIC15.34■□□□□ 0.05
SPCS1Q9Y6A9 NYAP1-202ENST00000454988 2777 ntTSL 5 BASIC15.34■□□□□ 0.05
SPCS1Q9Y6A9 MBD3-207ENST00000590550 2782 ntTSL 2 BASIC15.34■□□□□ 0.05
SPCS1Q9Y6A9 CBWD3-201ENST00000360171 2165 ntAPPRIS P2 TSL 1 (best) BASIC15.34■□□□□ 0.05
SPCS1Q9Y6A9 UNKL-205ENST00000397464 2180 ntTSL 2 BASIC15.34■□□□□ 0.05
SPCS1Q9Y6A9 FBXL15-202ENST00000369956 2344 ntAPPRIS ALT1 TSL 1 (best) BASIC15.33■□□□□ 0.05
SPCS1Q9Y6A9 SMARCC1-201ENST00000254480 6375 ntAPPRIS P1 TSL 1 (best) BASIC15.33■□□□□ 0.04
SPCS1Q9Y6A9 NR0B1-202ENST00000378970 2021 ntAPPRIS P1 TSL 1 (best) BASIC15.33■□□□□ 0.04
SPCS1Q9Y6A9 MCAT-201ENST00000290429 2056 ntAPPRIS P1 TSL 1 (best) BASIC15.33■□□□□ 0.04
SPCS1Q9Y6A9 LY6K-203ENST00000519387 963 ntAPPRIS ALT2 TSL 2 BASIC15.33■□□□□ 0.04
SPCS1Q9Y6A9 FAM124A-202ENST00000322475 4761 ntAPPRIS P1 TSL 1 (best) BASIC15.33■□□□□ 0.04
SPCS1Q9Y6A9 USP25-204ENST00000400183 5341 ntTSL 1 (best) BASIC15.33■□□□□ 0.04
SPCS1Q9Y6A9 IMPAD1-201ENST00000262644 7199 ntAPPRIS P1 TSL 1 (best) BASIC15.33■□□□□ 0.04
SPCS1Q9Y6A9 ADARB2-202ENST00000381310 1810 ntTSL 1 (best) BASIC15.33■□□□□ 0.04
SPCS1Q9Y6A9 EPHX3-204ENST00000602233 1805 ntAPPRIS P1 TSL 5 BASIC15.33■□□□□ 0.04
SPCS1Q9Y6A9 CADPS2-208ENST00000615869 6066 ntAPPRIS ALT1 TSL 5 BASIC15.33■□□□□ 0.04
SPCS1Q9Y6A9 BACE2-201ENST00000328735 2824 ntTSL 1 (best) BASIC15.33■□□□□ 0.04
SPCS1Q9Y6A9 NOMO2-201ENST00000330537 4352 ntAPPRIS ALT2 TSL 5 BASIC15.33■□□□□ 0.04
SPCS1Q9Y6A9 LTBP3-217ENST00000530785 2461 ntTSL 2 BASIC15.33■□□□□ 0.04
SPCS1Q9Y6A9 PLCH2-205ENST00000449969 5450 ntTSL 5 BASIC15.33■□□□□ 0.04
SPCS1Q9Y6A9 FBXO27-202ENST00000509137 2130 ntAPPRIS P2 TSL 1 (best) BASIC15.32■□□□□ 0.04
SPCS1Q9Y6A9 HSD3B7-202ENST00000297679 2172 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
SPCS1Q9Y6A9 FAH-202ENST00000407106 2152 ntAPPRIS P1 TSL 5 BASIC15.32■□□□□ 0.04
SPCS1Q9Y6A9 FAM129C-212ENST00000601861 2180 ntAPPRIS ALT2 TSL 2 BASIC15.32■□□□□ 0.04
SPCS1Q9Y6A9 AC005229.4-201ENST00000610085 2198 ntBASIC15.32■□□□□ 0.04
Retrieved 100 of 98,524 protein–RNA pairs in 19.5 ms