Protein–RNA interactions for Protein: Q9Y5G4

PCDHGA9, Protocadherin gamma-A9, humanhuman

Known RBP Predictions only

Length 932 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHGA9Q9Y5G4 NFKBIB-204ENST00000572515 1929 ntTSL 1 (best) BASIC20.82■□□□□ 0.92
PCDHGA9Q9Y5G4 RASEF-201ENST00000340717 1765 ntTSL 2 BASIC20.82■□□□□ 0.92
PCDHGA9Q9Y5G4 ST3GAL4-213ENST00000530591 1459 ntAPPRIS P3 TSL 1 (best) BASIC20.82■□□□□ 0.92
PCDHGA9Q9Y5G4 MADCAM1-206ENST00000617201 1491 ntAPPRIS ALT2 TSL 5 BASIC20.82■□□□□ 0.92
PCDHGA9Q9Y5G4 MADCAM1-207ENST00000619333 1485 ntAPPRIS ALT2 TSL 5 BASIC20.82■□□□□ 0.92
PCDHGA9Q9Y5G4 MADCAM1-210ENST00000622462 1461 ntAPPRIS ALT2 TSL 5 BASIC20.82■□□□□ 0.92
PCDHGA9Q9Y5G4 ID2-201ENST00000234091 2041 ntAPPRIS P1 TSL 1 (best) BASIC20.82■□□□□ 0.92
PCDHGA9Q9Y5G4 SUGCT-209ENST00000628514 1591 ntAPPRIS P4 TSL 1 (best) BASIC20.82■□□□□ 0.92
PCDHGA9Q9Y5G4 AC108002.2-201ENST00000519782 340 ntTSL 4 BASIC20.82■□□□□ 0.92
PCDHGA9Q9Y5G4 AC096887.1-203ENST00000607203 768 ntAPPRIS ALT2 TSL 5 BASIC20.82■□□□□ 0.92
PCDHGA9Q9Y5G4 MYCL-201ENST00000372815 1944 ntTSL 1 (best) BASIC20.82■□□□□ 0.92
PCDHGA9Q9Y5G4 METTL21A-210ENST00000458426 1366 ntTSL 1 (best) BASIC20.82■□□□□ 0.92
PCDHGA9Q9Y5G4 ZNF503-AS2-201ENST00000425916 2026 ntTSL 1 (best) BASIC20.82■□□□□ 0.92
PCDHGA9Q9Y5G4 LINC01578-209ENST00000557682 2683 ntTSL 2 BASIC20.81■□□□□ 0.92
PCDHGA9Q9Y5G4 ZFYVE19-201ENST00000299173 1555 ntAPPRIS ALT2 TSL 1 (best) BASIC20.81■□□□□ 0.92
PCDHGA9Q9Y5G4 DPF1-206ENST00000420980 2227 ntTSL 1 (best) BASIC20.81■□□□□ 0.92
PCDHGA9Q9Y5G4 IQANK1-201ENST00000527139 1803 ntAPPRIS P1 TSL 5 BASIC20.81■□□□□ 0.92
PCDHGA9Q9Y5G4 UXS1-201ENST00000283148 2099 ntAPPRIS ALT1 TSL 2 BASIC20.81■□□□□ 0.92
PCDHGA9Q9Y5G4 NME4-201ENST00000219479 995 ntAPPRIS P1 TSL 1 (best) BASIC20.81■□□□□ 0.92
PCDHGA9Q9Y5G4 UBE2C-202ENST00000335046 737 ntTSL 2 BASIC20.81■□□□□ 0.92
PCDHGA9Q9Y5G4 NME4-202ENST00000382940 766 ntTSL 3 BASIC20.81■□□□□ 0.92
PCDHGA9Q9Y5G4 SPOCK2-203ENST00000412663 1284 ntTSL 5 BASIC20.81■□□□□ 0.92
PCDHGA9Q9Y5G4 BCAP29-209ENST00000465919 942 ntTSL 2 BASIC20.81■□□□□ 0.92
PCDHGA9Q9Y5G4 NME4-211ENST00000620944 1193 ntTSL 2 BASIC20.81■□□□□ 0.92
PCDHGA9Q9Y5G4 GTSE1-AS1-202ENST00000623117 1518 ntBASIC20.81■□□□□ 0.92
PCDHGA9Q9Y5G4 SNCB-201ENST00000310112 1383 ntAPPRIS P1 TSL 1 (best) BASIC20.81■□□□□ 0.92
PCDHGA9Q9Y5G4 FPGS-202ENST00000373228 1383 ntTSL 5 BASIC20.81■□□□□ 0.92
PCDHGA9Q9Y5G4 IDH2-202ENST00000540499 1453 ntTSL 2 BASIC20.81■□□□□ 0.92
PCDHGA9Q9Y5G4 AC141586.4-201ENST00000624558 1573 ntBASIC20.8■□□□□ 0.92
PCDHGA9Q9Y5G4 DLEU2-208ENST00000621282 3068 ntTSL 1 (best) BASIC20.8■□□□□ 0.92
PCDHGA9Q9Y5G4 LINC01124-201ENST00000409786 2117 ntBASIC20.8■□□□□ 0.92
PCDHGA9Q9Y5G4 SLC22A31-206ENST00000614943 1860 ntTSL 5 BASIC20.8■□□□□ 0.92
PCDHGA9Q9Y5G4 SPI1-201ENST00000227163 1168 ntAPPRIS ALT1 TSL 2 BASIC20.8■□□□□ 0.92
PCDHGA9Q9Y5G4 EDA-209ENST00000525810 843 ntTSL 1 (best) BASIC20.8■□□□□ 0.92
PCDHGA9Q9Y5G4 RPLP2-207ENST00000530797 637 ntAPPRIS P1 TSL 1 (best) BASIC20.8■□□□□ 0.92
PCDHGA9Q9Y5G4 MADCAM1-208ENST00000621286 1203 ntAPPRIS ALT2 TSL 5 BASIC20.8■□□□□ 0.92
PCDHGA9Q9Y5G4 AL358852.1-201ENST00000623174 1268 ntBASIC20.8■□□□□ 0.92
PCDHGA9Q9Y5G4 IMPA2-212ENST00000625802 500 ntTSL 2 BASIC20.8■□□□□ 0.92
PCDHGA9Q9Y5G4 EED-207ENST00000528180 1745 ntTSL 5 BASIC20.8■□□□□ 0.92
PCDHGA9Q9Y5G4 HOXD4-201ENST00000306324 1464 ntAPPRIS P1 TSL 1 (best) BASIC20.8■□□□□ 0.92
PCDHGA9Q9Y5G4 CASK-201ENST00000378154 2494 ntTSL 5 BASIC20.8■□□□□ 0.92
PCDHGA9Q9Y5G4 TSPY26P-201ENST00000476365 1326 ntBASIC20.79■□□□□ 0.92
PCDHGA9Q9Y5G4 UNC50-204ENST00000409975 2172 ntTSL 1 (best) BASIC20.79■□□□□ 0.92
PCDHGA9Q9Y5G4 LY6E-201ENST00000292494 1181 ntAPPRIS P2 TSL 1 (best) BASIC20.79■□□□□ 0.92
PCDHGA9Q9Y5G4 NMRAL1-202ENST00000404295 1233 ntAPPRIS P1 TSL 1 (best) BASIC20.79■□□□□ 0.92
PCDHGA9Q9Y5G4 SLC25A45-206ENST00000526432 894 ntTSL 1 (best) BASIC20.79■□□□□ 0.92
PCDHGA9Q9Y5G4 AP003419.1-201ENST00000535922 470 ntTSL 3 BASIC20.79■□□□□ 0.92
PCDHGA9Q9Y5G4 AC010203.1-202ENST00000550096 695 ntTSL 3 BASIC20.79■□□□□ 0.92
PCDHGA9Q9Y5G4 RARRES2P11-201ENST00000635158 484 ntBASIC20.79■□□□□ 0.92
PCDHGA9Q9Y5G4 MFSD5-201ENST00000329548 1760 ntAPPRIS P1 TSL 1 (best) BASIC20.79■□□□□ 0.92
PCDHGA9Q9Y5G4 TANGO2-207ENST00000420290 1859 ntTSL 2 BASIC20.79■□□□□ 0.92
PCDHGA9Q9Y5G4 ADAD2-202ENST00000315906 1995 ntAPPRIS ALT2 TSL 1 (best) BASIC20.79■□□□□ 0.92
PCDHGA9Q9Y5G4 HORMAD2-201ENST00000336726 2187 ntAPPRIS P1 TSL 1 (best) BASIC20.79■□□□□ 0.92
PCDHGA9Q9Y5G4 PHC2-202ENST00000373418 2550 ntAPPRIS ALT2 TSL 1 (best) BASIC20.79■□□□□ 0.92
PCDHGA9Q9Y5G4 LINC00454-202ENST00000430978 1327 ntTSL 5 BASIC20.78■□□□□ 0.92
PCDHGA9Q9Y5G4 USF2-207ENST00000595068 1612 ntTSL 5 BASIC20.78■□□□□ 0.92
PCDHGA9Q9Y5G4 STARD3NL-201ENST00000009041 1728 ntAPPRIS P1 TSL 1 (best) BASIC20.78■□□□□ 0.92
PCDHGA9Q9Y5G4 LSR-204ENST00000361790 2210 ntAPPRIS P4 TSL 1 (best) BASIC20.78■□□□□ 0.92
PCDHGA9Q9Y5G4 SOX10-202ENST00000396884 2879 ntAPPRIS P1 TSL 1 (best) BASIC20.78■□□□□ 0.92
PCDHGA9Q9Y5G4 PYY-201ENST00000360085 1053 ntAPPRIS P2 TSL 1 (best) BASIC20.78■□□□□ 0.92
PCDHGA9Q9Y5G4 MRPL14-201ENST00000372014 959 ntAPPRIS P1 TSL 1 (best) BASIC20.78■□□□□ 0.92
PCDHGA9Q9Y5G4 AC027612.3-201ENST00000413684 1047 ntBASIC20.78■□□□□ 0.92
PCDHGA9Q9Y5G4 LINC01167-201ENST00000423232 604 ntTSL 3 BASIC20.78■□□□□ 0.92
PCDHGA9Q9Y5G4 AC123595.1-201ENST00000440769 1046 ntBASIC20.78■□□□□ 0.92
PCDHGA9Q9Y5G4 MED14OS-201ENST00000456333 900 ntAPPRIS P1 TSL 1 (best) BASIC20.78■□□□□ 0.92
PCDHGA9Q9Y5G4 AL583722.4-201ENST00000555524 716 ntTSL 3 BASIC20.78■□□□□ 0.92
PCDHGA9Q9Y5G4 AC005775.1-201ENST00000592413 850 ntTSL 5 BASIC20.78■□□□□ 0.92
PCDHGA9Q9Y5G4 AC022517.1-201ENST00000592429 346 ntBASIC20.78■□□□□ 0.92
PCDHGA9Q9Y5G4 FNTA-201ENST00000302279 1840 ntAPPRIS P1 TSL 1 (best) BASIC20.78■□□□□ 0.92
PCDHGA9Q9Y5G4 SRXN1-201ENST00000381962 2698 ntAPPRIS P1 TSL 1 (best) BASIC20.78■□□□□ 0.92
PCDHGA9Q9Y5G4 IRF2BP1-201ENST00000302165 2564 ntAPPRIS P1 BASIC20.78■□□□□ 0.92
PCDHGA9Q9Y5G4 LENG1-201ENST00000222224 1542 ntAPPRIS P1 TSL 1 (best) BASIC20.78■□□□□ 0.92
PCDHGA9Q9Y5G4 HSPBP1-206ENST00000587922 1449 ntAPPRIS P1 TSL 1 (best) BASIC20.78■□□□□ 0.92
PCDHGA9Q9Y5G4 CDIPT-210ENST00000570016 1346 ntAPPRIS P1 TSL 5 BASIC20.78■□□□□ 0.92
PCDHGA9Q9Y5G4 ABHD8-201ENST00000247706 2090 ntAPPRIS P1 TSL 1 (best) BASIC20.77■□□□□ 0.92
PCDHGA9Q9Y5G4 ST7L-221ENST00000490067 1780 ntTSL 1 (best) BASIC20.77■□□□□ 0.92
PCDHGA9Q9Y5G4 PPAN-201ENST00000253107 1657 ntAPPRIS P1 TSL 1 (best) BASIC20.77■□□□□ 0.92
PCDHGA9Q9Y5G4 ZMYND11-210ENST00000403354 1664 ntTSL 5 BASIC20.77■□□□□ 0.92
PCDHGA9Q9Y5G4 RFC2-201ENST00000055077 1695 ntAPPRIS P1 TSL 1 (best) BASIC20.77■□□□□ 0.92
PCDHGA9Q9Y5G4 DACT1-201ENST00000335867 2571 ntAPPRIS P3 TSL 1 (best) BASIC20.77■□□□□ 0.92
PCDHGA9Q9Y5G4 HAUS7-202ENST00000370211 1363 ntAPPRIS P2 TSL 1 (best) BASIC20.77■□□□□ 0.92
PCDHGA9Q9Y5G4 AF117829.1-201ENST00000519655 1398 ntTSL 5 BASIC20.77■□□□□ 0.92
PCDHGA9Q9Y5G4 CPOX-201ENST00000264193 2825 ntAPPRIS P1 TSL 1 (best) BASIC20.77■□□□□ 0.92
PCDHGA9Q9Y5G4 BCL2L12-201ENST00000246784 990 ntAPPRIS ALT2 TSL 1 (best) BASIC20.77■□□□□ 0.92
PCDHGA9Q9Y5G4 MELTF-AS1-202ENST00000415244 951 ntTSL 1 (best) BASIC20.77■□□□□ 0.92
PCDHGA9Q9Y5G4 KRT18P5-201ENST00000436075 1291 ntBASIC20.77■□□□□ 0.92
PCDHGA9Q9Y5G4 LRRK1-208ENST00000532029 1241 ntTSL 1 (best) BASIC20.77■□□□□ 0.92
PCDHGA9Q9Y5G4 OIP5-AS1-208ENST00000560706 473 ntTSL 5 BASIC20.77■□□□□ 0.92
PCDHGA9Q9Y5G4 AL137784.2-201ENST00000607332 1000 ntBASIC20.77■□□□□ 0.92
PCDHGA9Q9Y5G4 RAB43-208ENST00000615093 783 ntTSL 5 BASIC20.77■□□□□ 0.92
PCDHGA9Q9Y5G4 TSNARE1-208ENST00000524325 1963 ntAPPRIS P3 TSL 2 BASIC20.77■□□□□ 0.92
PCDHGA9Q9Y5G4 PEX11G-203ENST00000593942 1345 ntTSL 5 BASIC20.77■□□□□ 0.91
PCDHGA9Q9Y5G4 ANKRD53-204ENST00000457410 1671 ntTSL 5 BASIC20.77■□□□□ 0.91
PCDHGA9Q9Y5G4 WIPI2-202ENST00000382384 1948 ntTSL 1 (best) BASIC20.76■□□□□ 0.91
PCDHGA9Q9Y5G4 CCZ1B-201ENST00000316731 2885 ntAPPRIS P1 TSL 1 (best) BASIC20.76■□□□□ 0.91
PCDHGA9Q9Y5G4 FAM47E-201ENST00000424749 1484 ntAPPRIS P3 TSL 5 BASIC20.76■□□□□ 0.91
PCDHGA9Q9Y5G4 DTNB-211ENST00000407661 2420 ntAPPRIS ALT1 TSL 1 (best) BASIC20.76■□□□□ 0.91
PCDHGA9Q9Y5G4 GET4-201ENST00000265857 2090 ntAPPRIS P2 TSL 1 (best) BASIC20.76■□□□□ 0.91
PCDHGA9Q9Y5G4 PPP1R26-201ENST00000356818 4932 ntAPPRIS P1 TSL 1 (best) BASIC20.76■□□□□ 0.91
PCDHGA9Q9Y5G4 ODF3L2-201ENST00000315489 1604 ntAPPRIS P2 TSL 1 (best) BASIC20.76■□□□□ 0.91
Retrieved 100 of 98,524 protein–RNA pairs in 216.3 ms