Protein–RNA interactions for Protein: Q9Y3A4

RRP7A, Ribosomal RNA-processing protein 7 homolog A, humanhuman

Known RBP Predictions only

Length 280 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RRP7AQ9Y3A4 SIX3-201ENST00000260653 2523 ntAPPRIS P1 TSL 1 (best) BASIC29.47■■■□□ 2.31
RRP7AQ9Y3A4 ST3GAL4-213ENST00000530591 1459 ntAPPRIS P3 TSL 1 (best) BASIC29.47■■■□□ 2.31
RRP7AQ9Y3A4 PKIB-204ENST00000368448 1561 ntAPPRIS P1 TSL 5 BASIC29.47■■■□□ 2.31
RRP7AQ9Y3A4 PPAN-201ENST00000253107 1657 ntAPPRIS P1 TSL 1 (best) BASIC29.47■■■□□ 2.31
RRP7AQ9Y3A4 C1orf122-202ENST00000373043 2229 ntAPPRIS ALT2 TSL 1 (best) BASIC29.47■■■□□ 2.31
RRP7AQ9Y3A4 NIPSNAP2-205ENST00000446778 1882 ntTSL 2 BASIC29.46■■■□□ 2.31
RRP7AQ9Y3A4 GET4-201ENST00000265857 2090 ntAPPRIS P2 TSL 1 (best) BASIC29.46■■■□□ 2.31
RRP7AQ9Y3A4 SLC25A5-AS1-202ENST00000445759 1616 ntTSL 1 (best) BASIC29.46■■■□□ 2.31
RRP7AQ9Y3A4 SLC35A2-210ENST00000616181 1614 ntTSL 2 BASIC29.46■■■□□ 2.31
RRP7AQ9Y3A4 TNFRSF10B-202ENST00000347739 1723 ntAPPRIS ALT2 TSL 1 (best) BASIC29.46■■■□□ 2.31
RRP7AQ9Y3A4 PBX2P1-201ENST00000493219 1291 ntBASIC29.46■■■□□ 2.31
RRP7AQ9Y3A4 FXYD3-201ENST00000344013 1404 ntTSL 5 BASIC29.45■■■□□ 2.31
RRP7AQ9Y3A4 MYCBPAP-202ENST00000419930 1640 ntAPPRIS ALT2 TSL 1 (best) BASIC29.45■■■□□ 2.31
RRP7AQ9Y3A4 CPNE2-202ENST00000535318 2316 ntAPPRIS P1 TSL 1 (best) BASIC29.45■■■□□ 2.31
RRP7AQ9Y3A4 BTBD7-205ENST00000554565 2697 ntTSL 1 (best) BASIC29.45■■■□□ 2.31
RRP7AQ9Y3A4 HECA-201ENST00000367658 5614 ntAPPRIS P1 TSL 1 (best) BASIC29.45■■■□□ 2.3
RRP7AQ9Y3A4 DIXDC1-205ENST00000529225 1945 ntTSL 5 BASIC29.45■■■□□ 2.3
RRP7AQ9Y3A4 WRNIP1-205ENST00000618555 2651 ntAPPRIS P1 TSL 1 (best) BASIC29.45■■■□□ 2.3
RRP7AQ9Y3A4 MADCAM1-205ENST00000613880 1509 ntAPPRIS ALT2 TSL 5 BASIC29.45■■■□□ 2.3
RRP7AQ9Y3A4 SESN3-202ENST00000416495 1408 ntTSL 1 (best) BASIC29.45■■■□□ 2.3
RRP7AQ9Y3A4 PCDH1-204ENST00000503492 2373 ntTSL 5 BASIC29.45■■■□□ 2.3
RRP7AQ9Y3A4 SYF2-201ENST00000236273 1345 ntAPPRIS P1 TSL 1 (best) BASIC29.45■■■□□ 2.3
RRP7AQ9Y3A4 DNAAF3-203ENST00000524407 2059 ntAPPRIS ALT2 TSL 1 (best) BASIC29.44■■■□□ 2.3
RRP7AQ9Y3A4 TSEN15-201ENST00000361641 1960 ntAPPRIS P1 TSL 1 (best) BASIC29.44■■■□□ 2.3
RRP7AQ9Y3A4 MRPL38-201ENST00000309352 1888 ntAPPRIS P1 TSL 1 (best) BASIC29.44■■■□□ 2.3
RRP7AQ9Y3A4 MEIOB-202ENST00000397344 1792 ntTSL 5 BASIC29.44■■■□□ 2.3
RRP7AQ9Y3A4 WDR86-AS1-204ENST00000489632 751 ntTSL 3 BASIC29.44■■■□□ 2.3
RRP7AQ9Y3A4 AC092068.2-201ENST00000590491 1708 ntBASIC29.44■■■□□ 2.3
RRP7AQ9Y3A4 RNASEH2B-201ENST00000336617 1629 ntAPPRIS P1 TSL 1 (best) BASIC29.44■■■□□ 2.3
RRP7AQ9Y3A4 PYGO2-201ENST00000368456 1306 ntTSL 2 BASIC29.44■■■□□ 2.3
RRP7AQ9Y3A4 RBPMS2-201ENST00000300069 2008 ntAPPRIS P1 TSL 1 (best) BASIC29.44■■■□□ 2.3
RRP7AQ9Y3A4 SPPL2B-211ENST00000614794 1559 ntTSL 1 (best) BASIC29.43■■■□□ 2.3
RRP7AQ9Y3A4 AC011498.4-201ENST00000586020 1803 ntAPPRIS P1 TSL 2 BASIC29.43■■■□□ 2.3
RRP7AQ9Y3A4 NPHS2-201ENST00000367615 1855 ntAPPRIS P1 TSL 1 (best) BASIC29.43■■■□□ 2.3
RRP7AQ9Y3A4 C19orf60-201ENST00000358607 839 ntAPPRIS P3 TSL 1 (best) BASIC29.43■■■□□ 2.3
RRP7AQ9Y3A4 AC105935.1-201ENST00000424174 422 ntTSL 3 BASIC29.43■■■□□ 2.3
RRP7AQ9Y3A4 PTCHD3P2-201ENST00000424937 1205 ntBASIC29.43■■■□□ 2.3
RRP7AQ9Y3A4 C19orf60-202ENST00000450195 702 ntAPPRIS ALT2 TSL 1 (best) BASIC29.43■■■□□ 2.3
RRP7AQ9Y3A4 VAMP2-204ENST00000488857 874 ntAPPRIS ALT1 TSL 3 BASIC29.43■■■□□ 2.3
RRP7AQ9Y3A4 LINC01529-204ENST00000636474 1715 ntBASIC29.42■■■□□ 2.3
RRP7AQ9Y3A4 SRPK3-204ENST00000370108 1863 ntAPPRIS ALT2 TSL 5 BASIC29.42■■■□□ 2.3
RRP7AQ9Y3A4 PACRGL-201ENST00000295290 1937 ntTSL 5 BASIC29.42■■■□□ 2.3
RRP7AQ9Y3A4 MIR3181-201ENST00000578512 73 ntBASIC29.42■■■□□ 2.3
RRP7AQ9Y3A4 pRNA.6-201ENST00000610482 90 ntBASIC29.42■■■□□ 2.3
RRP7AQ9Y3A4 pRNA.5-201ENST00000612139 90 ntBASIC29.42■■■□□ 2.3
RRP7AQ9Y3A4 pRNA.11-201ENST00000618423 90 ntBASIC29.42■■■□□ 2.3
RRP7AQ9Y3A4 pRNA.13-201ENST00000619112 90 ntBASIC29.42■■■□□ 2.3
RRP7AQ9Y3A4 AC241377.3-202ENST00000626088 1088 ntBASIC29.42■■■□□ 2.3
RRP7AQ9Y3A4 AC241585.3-202ENST00000628937 1088 ntBASIC29.42■■■□□ 2.3
RRP7AQ9Y3A4 AC245100.8-202ENST00000629247 1058 ntBASIC29.42■■■□□ 2.3
RRP7AQ9Y3A4 SRRM2-231ENST00000630499 1207 ntTSL 1 (best) BASIC29.42■■■□□ 2.3
RRP7AQ9Y3A4 SOHLH1-201ENST00000298466 1987 ntAPPRIS P3 TSL 1 (best) BASIC29.42■■■□□ 2.3
RRP7AQ9Y3A4 MAP6D1-201ENST00000318631 2111 ntAPPRIS P2 TSL 1 (best) BASIC29.42■■■□□ 2.3
RRP7AQ9Y3A4 AKT1-201ENST00000349310 2866 ntAPPRIS P1 TSL 1 (best) BASIC29.42■■■□□ 2.3
RRP7AQ9Y3A4 FAM47E-201ENST00000424749 1484 ntAPPRIS P3 TSL 5 BASIC29.42■■■□□ 2.3
RRP7AQ9Y3A4 IRX5-201ENST00000320990 2061 ntAPPRIS ALT1 TSL 1 (best) BASIC29.41■■■□□ 2.3
RRP7AQ9Y3A4 THRA-201ENST00000264637 2538 ntTSL 1 (best) BASIC29.41■■■□□ 2.3
RRP7AQ9Y3A4 MYL5-208ENST00000511290 781 ntTSL 1 (best) BASIC29.41■■■□□ 2.3
RRP7AQ9Y3A4 TYROBP-203ENST00000544690 522 ntTSL 1 (best) BASIC29.41■■■□□ 2.3
RRP7AQ9Y3A4 PPP1R14A-204ENST00000591291 433 ntTSL 5 BASIC29.41■■■□□ 2.3
RRP7AQ9Y3A4 SLC35A3-216ENST00000639221 1032 ntTSL 5 BASIC29.41■■■□□ 2.3
RRP7AQ9Y3A4 SYT6-210ENST00000641643 1587 ntBASIC29.41■■■□□ 2.3
RRP7AQ9Y3A4 CCDC151-203ENST00000591179 1943 ntTSL 1 (best) BASIC29.41■■■□□ 2.3
RRP7AQ9Y3A4 PCYT2-201ENST00000331285 2147 ntTSL 2 BASIC29.41■■■□□ 2.3
RRP7AQ9Y3A4 SPINT2-201ENST00000301244 1802 ntAPPRIS P2 TSL 1 (best) BASIC29.41■■■□□ 2.3
RRP7AQ9Y3A4 ARRDC2-202ENST00000379656 2528 ntTSL 2 BASIC29.4■■■□□ 2.3
RRP7AQ9Y3A4 TANGO2-201ENST00000327374 2273 ntAPPRIS P1 TSL 1 (best) BASIC29.4■■■□□ 2.3
RRP7AQ9Y3A4 IL20RA-202ENST00000367746 1244 ntTSL 2 BASIC29.4■■■□□ 2.3
RRP7AQ9Y3A4 AC024257.2-201ENST00000549699 147 ntBASIC29.4■■■□□ 2.3
RRP7AQ9Y3A4 AL136162.1-201ENST00000607711 1078 ntBASIC29.4■■■□□ 2.3
RRP7AQ9Y3A4 AC106739.1-201ENST00000617035 715 ntBASIC29.4■■■□□ 2.3
RRP7AQ9Y3A4 C1QTNF4-201ENST00000302514 1664 ntAPPRIS P1 TSL 1 (best) BASIC29.4■■■□□ 2.3
RRP7AQ9Y3A4 POLD2-207ENST00000452185 1659 ntAPPRIS P1 TSL 1 (best) BASIC29.4■■■□□ 2.3
RRP7AQ9Y3A4 TBX1-203ENST00000359500 1538 ntAPPRIS ALT2 TSL 1 (best) BASIC29.4■■■□□ 2.3
RRP7AQ9Y3A4 TMEM150C-201ENST00000449862 1990 ntAPPRIS P1 TSL 1 (best) BASIC29.39■■■□□ 2.3
RRP7AQ9Y3A4 NFE2L3P1-201ENST00000588207 1959 ntBASIC29.39■■■□□ 2.3
RRP7AQ9Y3A4 CPLX1-201ENST00000304062 2181 ntAPPRIS P1 TSL 1 (best) BASIC29.39■■■□□ 2.3
RRP7AQ9Y3A4 NPEPL1-201ENST00000356091 2378 ntAPPRIS P1 TSL 1 (best) BASIC29.39■■■□□ 2.3
RRP7AQ9Y3A4 C9orf163-202ENST00000624034 2573 ntBASIC29.39■■■□□ 2.3
RRP7AQ9Y3A4 DUX4L4-201ENST00000566884 1269 ntBASIC29.39■■■□□ 2.3
RRP7AQ9Y3A4 NAE1-204ENST00000394074 1654 ntTSL 5 BASIC29.39■■■□□ 2.3
RRP7AQ9Y3A4 HAGHL-212ENST00000564537 1667 ntTSL 2 BASIC29.39■■■□□ 2.3
RRP7AQ9Y3A4 PKM-201ENST00000319622 2717 ntAPPRIS P5 TSL 2 BASIC29.39■■■□□ 2.3
RRP7AQ9Y3A4 ROGDI-201ENST00000322048 1735 ntAPPRIS P1 TSL 1 (best) BASIC29.39■■■□□ 2.3
RRP7AQ9Y3A4 LYPLA1-201ENST00000316963 2585 ntAPPRIS P1 TSL 1 (best) BASIC29.39■■■□□ 2.29
RRP7AQ9Y3A4 PCK2-201ENST00000216780 2357 ntAPPRIS P1 TSL 1 (best) BASIC29.39■■■□□ 2.29
RRP7AQ9Y3A4 FP325331.1-202ENST00000623531 1380 ntBASIC29.39■■■□□ 2.29
RRP7AQ9Y3A4 NAA38-201ENST00000333775 999 ntTSL 1 (best) BASIC29.38■■■□□ 2.29
RRP7AQ9Y3A4 NRL-205ENST00000560550 788 ntTSL 1 (best) BASIC29.38■■■□□ 2.29
RRP7AQ9Y3A4 AC133561.4-201ENST00000566112 224 ntBASIC29.38■■■□□ 2.29
RRP7AQ9Y3A4 LENG1-201ENST00000222224 1542 ntAPPRIS P1 TSL 1 (best) BASIC29.38■■■□□ 2.29
RRP7AQ9Y3A4 ACAD8-202ENST00000374752 1797 ntTSL 2 BASIC29.38■■■□□ 2.29
RRP7AQ9Y3A4 KREMEN2-204ENST00000572045 2339 ntAPPRIS ALT2 TSL 1 (best) BASIC29.38■■■□□ 2.29
RRP7AQ9Y3A4 SH3RF3-AS1-201ENST00000567491 1604 ntBASIC29.38■■■□□ 2.29
RRP7AQ9Y3A4 NR2F1-AS1-210ENST00000606739 1431 ntTSL 2 BASIC29.37■■■□□ 2.29
RRP7AQ9Y3A4 BX088645.1-201ENST00000636699 1728 ntAPPRIS P1 TSL 5 BASIC29.37■■■□□ 2.29
RRP7AQ9Y3A4 PANK2-201ENST00000316562 2280 ntAPPRIS P2 TSL 1 (best) BASIC29.37■■■□□ 2.29
RRP7AQ9Y3A4 LIN7B-202ENST00000391864 582 ntTSL 3 BASIC29.37■■■□□ 2.29
RRP7AQ9Y3A4 FAM57A-202ENST00000308278 2412 ntAPPRIS P1 TSL 1 (best) BASIC29.36■■■□□ 2.29
RRP7AQ9Y3A4 NAE1-202ENST00000359087 1825 ntTSL 2 BASIC29.36■■■□□ 2.29
Retrieved 100 of 98,524 protein–RNA pairs in 15.3 ms