Protein–RNA interactions for Protein: Q9UN74

PCDHA4, Protocadherin alpha-4, humanhuman

Predictions only

Length 947 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHA4Q9UN74 PITX2-209ENST00000557119 1889 ntTSL 2 BASIC25.59■■□□□ 1.69
PCDHA4Q9UN74 AC011498.4-201ENST00000586020 1803 ntAPPRIS P1 TSL 2 BASIC25.58■■□□□ 1.69
PCDHA4Q9UN74 AC008406.3-201ENST00000620001 1374 ntBASIC25.58■■□□□ 1.69
PCDHA4Q9UN74 DOHH-201ENST00000427575 2031 ntAPPRIS P1 TSL 1 (best) BASIC25.58■■□□□ 1.69
PCDHA4Q9UN74 DACT3-201ENST00000300875 2526 ntTSL 1 (best) BASIC25.58■■□□□ 1.69
PCDHA4Q9UN74 AC006455.2-201ENST00000429931 906 ntBASIC25.58■■□□□ 1.69
PCDHA4Q9UN74 AC009086.3-201ENST00000623486 1008 ntBASIC25.58■■□□□ 1.69
PCDHA4Q9UN74 LEFTY1-201ENST00000272134 1626 ntAPPRIS P1 TSL 1 (best) BASIC25.58■■□□□ 1.69
PCDHA4Q9UN74 RNASEH2B-201ENST00000336617 1629 ntAPPRIS P1 TSL 1 (best) BASIC25.58■■□□□ 1.69
PCDHA4Q9UN74 IDH2-202ENST00000540499 1453 ntTSL 2 BASIC25.58■■□□□ 1.69
PCDHA4Q9UN74 JAGN1-201ENST00000307768 1693 ntAPPRIS P1 TSL 1 (best) BASIC25.58■■□□□ 1.68
PCDHA4Q9UN74 NAE1-204ENST00000394074 1654 ntTSL 5 BASIC25.58■■□□□ 1.68
PCDHA4Q9UN74 ASCC1-204ENST00000394915 1510 ntTSL 5 BASIC25.58■■□□□ 1.68
PCDHA4Q9UN74 C21orf2-202ENST00000339818 2233 ntAPPRIS P3 TSL 1 (best) BASIC25.57■■□□□ 1.68
PCDHA4Q9UN74 PANK2-201ENST00000316562 2280 ntAPPRIS P2 TSL 1 (best) BASIC25.57■■□□□ 1.68
PCDHA4Q9UN74 FXYD3-201ENST00000344013 1404 ntTSL 5 BASIC25.57■■□□□ 1.68
PCDHA4Q9UN74 SMAD1-201ENST00000302085 1966 ntAPPRIS P1 TSL 1 (best) BASIC25.57■■□□□ 1.68
PCDHA4Q9UN74 ARRDC2-202ENST00000379656 2528 ntTSL 2 BASIC25.57■■□□□ 1.68
PCDHA4Q9UN74 SLC35A2-210ENST00000616181 1614 ntTSL 2 BASIC25.57■■□□□ 1.68
PCDHA4Q9UN74 UNC50-204ENST00000409975 2172 ntTSL 1 (best) BASIC25.57■■□□□ 1.68
PCDHA4Q9UN74 NKX2-5-202ENST00000424406 1124 ntTSL 1 (best) BASIC25.57■■□□□ 1.68
PCDHA4Q9UN74 AC093762.1-201ENST00000641981 837 ntAPPRIS P1 BASIC25.57■■□□□ 1.68
PCDHA4Q9UN74 ST3GAL4-213ENST00000530591 1459 ntAPPRIS P3 TSL 1 (best) BASIC25.57■■□□□ 1.68
PCDHA4Q9UN74 MIR222HG-201ENST00000602461 1379 ntTSL 5 BASIC25.56■■□□□ 1.68
PCDHA4Q9UN74 B3GALT4-204ENST00000451237 1694 ntAPPRIS P1 BASIC25.56■■□□□ 1.68
PCDHA4Q9UN74 SLC35A3-216ENST00000639221 1032 ntTSL 5 BASIC25.56■■□□□ 1.68
PCDHA4Q9UN74 GTSE1-AS1-202ENST00000623117 1518 ntBASIC25.56■■□□□ 1.68
PCDHA4Q9UN74 SAMD4B-208ENST00000598913 2877 ntAPPRIS ALT1 TSL 1 (best) BASIC25.56■■□□□ 1.68
PCDHA4Q9UN74 NFKBID-201ENST00000396901 1834 ntAPPRIS P2 TSL 1 (best) BASIC25.56■■□□□ 1.68
PCDHA4Q9UN74 NFKBID-211ENST00000641389 1834 ntAPPRIS ALT2 BASIC25.56■■□□□ 1.68
PCDHA4Q9UN74 C18orf65-201ENST00000622985 2076 ntTSL 2 BASIC25.56■■□□□ 1.68
PCDHA4Q9UN74 WRNIP1-205ENST00000618555 2651 ntAPPRIS P1 TSL 1 (best) BASIC25.55■■□□□ 1.68
PCDHA4Q9UN74 GDI1-204ENST00000447750 2474 ntAPPRIS P1 TSL 1 (best) BASIC25.55■■□□□ 1.68
PCDHA4Q9UN74 ACAD8-202ENST00000374752 1797 ntTSL 2 BASIC25.55■■□□□ 1.68
PCDHA4Q9UN74 LENG1-201ENST00000222224 1542 ntAPPRIS P1 TSL 1 (best) BASIC25.55■■□□□ 1.68
PCDHA4Q9UN74 MAST4-205ENST00000406039 717 ntTSL 1 (best) BASIC25.55■■□□□ 1.68
PCDHA4Q9UN74 AL122058.1-201ENST00000412321 1166 ntTSL 1 (best) BASIC25.55■■□□□ 1.68
PCDHA4Q9UN74 DPP10-AS1-201ENST00000432658 730 ntTSL 1 (best) BASIC25.55■■□□□ 1.68
PCDHA4Q9UN74 IL15RA-204ENST00000379977 1626 ntAPPRIS P3 TSL 1 (best) BASIC25.55■■□□□ 1.68
PCDHA4Q9UN74 SH3RF3-AS1-201ENST00000567491 1604 ntBASIC25.55■■□□□ 1.68
PCDHA4Q9UN74 ZSCAN18-212ENST00000600404 1934 ntAPPRIS ALT2 TSL 2 BASIC25.55■■□□□ 1.68
PCDHA4Q9UN74 MSANTD3-207ENST00000622639 1748 ntAPPRIS P1 TSL 3 BASIC25.54■■□□□ 1.68
PCDHA4Q9UN74 FAM47E-201ENST00000424749 1484 ntAPPRIS P3 TSL 5 BASIC25.54■■□□□ 1.68
PCDHA4Q9UN74 TARSL2-207ENST00000615656 2356 ntAPPRIS ALT2 TSL 5 BASIC25.54■■□□□ 1.68
PCDHA4Q9UN74 KRTAP5-4-201ENST00000399682 1181 ntAPPRIS P5 BASIC25.54■■□□□ 1.68
PCDHA4Q9UN74 PEMT-206ENST00000435340 960 ntTSL 5 BASIC25.54■■□□□ 1.68
PCDHA4Q9UN74 ARFIP2-205ENST00000525235 852 ntTSL 2 BASIC25.54■■□□□ 1.68
PCDHA4Q9UN74 AC092171.4-201ENST00000609130 632 ntBASIC25.54■■□□□ 1.68
PCDHA4Q9UN74 KLC1-205ENST00000380038 2322 ntTSL 2 BASIC25.54■■□□□ 1.68
PCDHA4Q9UN74 FMR1-AS1-201ENST00000594922 2005 ntTSL 1 (best) BASIC25.54■■□□□ 1.68
PCDHA4Q9UN74 SPINT2-201ENST00000301244 1802 ntAPPRIS P2 TSL 1 (best) BASIC25.53■■□□□ 1.68
PCDHA4Q9UN74 TARBP1-201ENST00000040877 5130 ntAPPRIS P1 TSL 1 (best) BASIC25.53■■□□□ 1.68
PCDHA4Q9UN74 MAZ-201ENST00000219782 2698 ntAPPRIS P4 TSL 1 (best) BASIC25.53■■□□□ 1.68
PCDHA4Q9UN74 SERTAD4-AS1-202ENST00000475406 591 ntTSL 2 BASIC25.53■■□□□ 1.68
PCDHA4Q9UN74 LINC01632-201ENST00000615763 496 ntTSL 3 BASIC25.53■■□□□ 1.68
PCDHA4Q9UN74 KRTAP5-4-202ENST00000616115 660 ntAPPRIS ALT2 TSL 5 BASIC25.53■■□□□ 1.68
PCDHA4Q9UN74 JAG2-202ENST00000347004 5720 ntTSL 1 (best) BASIC25.53■■□□□ 1.68
PCDHA4Q9UN74 ASPSCR1-208ENST00000580534 1776 ntTSL 2 BASIC25.53■■□□□ 1.68
PCDHA4Q9UN74 AARD-201ENST00000378279 2299 ntAPPRIS P1 TSL 1 (best) BASIC25.53■■□□□ 1.68
PCDHA4Q9UN74 BIN1-205ENST00000351659 2365 ntTSL 1 (best) BASIC25.53■■□□□ 1.68
PCDHA4Q9UN74 ACTR1B-201ENST00000289228 2243 ntAPPRIS P1 TSL 1 (best) BASIC25.52■■□□□ 1.68
PCDHA4Q9UN74 ST3GAL4-202ENST00000356132 1745 ntTSL 5 BASIC25.52■■□□□ 1.68
PCDHA4Q9UN74 PABPC1L-202ENST00000217074 1263 ntTSL 5 BASIC25.52■■□□□ 1.68
PCDHA4Q9UN74 CLYBL-202ENST00000376354 1127 ntTSL 5 BASIC25.52■■□□□ 1.68
PCDHA4Q9UN74 LRRK1-208ENST00000532029 1241 ntTSL 1 (best) BASIC25.52■■□□□ 1.68
PCDHA4Q9UN74 AL499627.2-201ENST00000606283 725 ntBASIC25.52■■□□□ 1.68
PCDHA4Q9UN74 PEX10-204ENST00000507596 1941 ntAPPRIS ALT1 TSL 5 BASIC25.52■■□□□ 1.68
PCDHA4Q9UN74 RNF19B-203ENST00000373456 2560 ntAPPRIS P3 TSL 1 (best) BASIC25.52■■□□□ 1.68
PCDHA4Q9UN74 HYAL2-207ENST00000442581 2318 ntAPPRIS P1 TSL 2 BASIC25.52■■□□□ 1.68
PCDHA4Q9UN74 NPEPL1-201ENST00000356091 2378 ntAPPRIS P1 TSL 1 (best) BASIC25.52■■□□□ 1.68
PCDHA4Q9UN74 THRA-201ENST00000264637 2538 ntTSL 1 (best) BASIC25.52■■□□□ 1.68
PCDHA4Q9UN74 IRF2BP1-201ENST00000302165 2564 ntAPPRIS P1 BASIC25.51■■□□□ 1.68
PCDHA4Q9UN74 KCTD8-201ENST00000360029 2587 ntAPPRIS P1 TSL 1 (best) BASIC25.51■■□□□ 1.68
PCDHA4Q9UN74 PFKFB3-201ENST00000317350 1999 ntAPPRIS ALT1 TSL 5 BASIC25.51■■□□□ 1.67
PCDHA4Q9UN74 RANBP10-206ENST00000602677 2374 ntTSL 5 BASIC25.51■■□□□ 1.67
PCDHA4Q9UN74 EN1-201ENST00000295206 2457 ntAPPRIS P1 TSL 2 BASIC25.51■■□□□ 1.67
PCDHA4Q9UN74 KRTAP5-1-201ENST00000382171 942 ntAPPRIS P1 BASIC25.51■■□□□ 1.67
PCDHA4Q9UN74 PRICKLE4-201ENST00000394259 939 ntAPPRIS ALT2 TSL 5 BASIC25.51■■□□□ 1.67
PCDHA4Q9UN74 WDR86-AS1-204ENST00000489632 751 ntTSL 3 BASIC25.51■■□□□ 1.67
PCDHA4Q9UN74 AC010336.5-201ENST00000594308 317 ntTSL 3 BASIC25.51■■□□□ 1.67
PCDHA4Q9UN74 CCDC166-201ENST00000542437 1320 ntAPPRIS P1 TSL 2 BASIC25.51■■□□□ 1.67
PCDHA4Q9UN74 CORO1A-201ENST00000219150 1803 ntAPPRIS P1 TSL 1 (best) BASIC25.51■■□□□ 1.67
PCDHA4Q9UN74 PYCARD-201ENST00000247470 990 ntAPPRIS P1 TSL 1 (best) BASIC25.5■■□□□ 1.67
PCDHA4Q9UN74 OSCAR-201ENST00000284648 2055 ntAPPRIS ALT2 TSL 1 (best) BASIC25.5■■□□□ 1.67
PCDHA4Q9UN74 EEF1D-201ENST00000317198 1458 ntAPPRIS ALT2 TSL 5 BASIC25.5■■□□□ 1.67
PCDHA4Q9UN74 PRR35-201ENST00000409413 2216 ntAPPRIS P1 TSL 1 (best) BASIC25.5■■□□□ 1.67
PCDHA4Q9UN74 VAMP2-204ENST00000488857 874 ntAPPRIS ALT1 TSL 3 BASIC25.5■■□□□ 1.67
PCDHA4Q9UN74 LAYN-209ENST00000533265 1703 ntTSL 5 BASIC25.5■■□□□ 1.67
PCDHA4Q9UN74 MLF2-206ENST00000539187 1110 ntAPPRIS P1 TSL 1 (best) BASIC25.5■■□□□ 1.67
PCDHA4Q9UN74 pRNA.6-201ENST00000610482 90 ntBASIC25.5■■□□□ 1.67
PCDHA4Q9UN74 pRNA.5-201ENST00000612139 90 ntBASIC25.5■■□□□ 1.67
PCDHA4Q9UN74 pRNA.11-201ENST00000618423 90 ntBASIC25.5■■□□□ 1.67
PCDHA4Q9UN74 pRNA.13-201ENST00000619112 90 ntBASIC25.5■■□□□ 1.67
PCDHA4Q9UN74 BTBD7-205ENST00000554565 2697 ntTSL 1 (best) BASIC25.5■■□□□ 1.67
PCDHA4Q9UN74 RCN2-201ENST00000320963 1750 ntTSL 5 BASIC25.49■■□□□ 1.67
PCDHA4Q9UN74 FAIM-201ENST00000338446 1622 ntTSL 5 BASIC25.49■■□□□ 1.67
PCDHA4Q9UN74 NR2F1-AS1-210ENST00000606739 1431 ntTSL 2 BASIC25.49■■□□□ 1.67
PCDHA4Q9UN74 DCTPP1-201ENST00000319285 1222 ntAPPRIS P1 TSL 1 (best) BASIC25.49■■□□□ 1.67
PCDHA4Q9UN74 KDELR3-202ENST00000409006 931 ntTSL 1 (best) BASIC25.49■■□□□ 1.67
PCDHA4Q9UN74 DUX4L19-201ENST00000557448 1267 ntBASIC25.49■■□□□ 1.67
Retrieved 100 of 98,524 protein–RNA pairs in 16.5 ms