Protein–RNA interactions for Protein: Q9ULS5

TMCC3, Transmembrane and coiled-coil domain protein 3, humanhuman

Predictions only

Length 477 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TMCC3Q9ULS5 ZKSCAN7-206ENST00000431636 1692 ntTSL 1 (best) BASIC20.61■□□□□ 0.89
TMCC3Q9ULS5 NBL1-202ENST00000375136 2172 ntAPPRIS P3 TSL 1 (best) BASIC20.61■□□□□ 0.89
TMCC3Q9ULS5 NPHS2-201ENST00000367615 1855 ntAPPRIS P1 TSL 1 (best) BASIC20.61■□□□□ 0.89
TMCC3Q9ULS5 MDK-206ENST00000407067 1026 ntAPPRIS P2 TSL 1 (best) BASIC20.61■□□□□ 0.89
TMCC3Q9ULS5 AL590677.1-201ENST00000438431 380 ntTSL 5 BASIC20.61■□□□□ 0.89
TMCC3Q9ULS5 AC139795.1-203ENST00000515045 853 ntTSL 2 BASIC20.61■□□□□ 0.89
TMCC3Q9ULS5 ERFE-207ENST00000546354 1065 ntAPPRIS P2 TSL 1 (best) BASIC20.61■□□□□ 0.89
TMCC3Q9ULS5 PLEKHA8-208ENST00000622102 2140 ntTSL 5 BASIC20.61■□□□□ 0.89
TMCC3Q9ULS5 SLC35D3-201ENST00000331858 2359 ntAPPRIS P1 TSL 1 (best) BASIC20.61■□□□□ 0.89
TMCC3Q9ULS5 ST8SIA2-201ENST00000268164 5708 ntAPPRIS P1 TSL 1 (best) BASIC20.61■□□□□ 0.89
TMCC3Q9ULS5 ZNF395-210ENST00000523095 1790 ntAPPRIS P1 TSL 1 (best) BASIC20.61■□□□□ 0.89
TMCC3Q9ULS5 STARD3NL-201ENST00000009041 1728 ntAPPRIS P1 TSL 1 (best) BASIC20.61■□□□□ 0.89
TMCC3Q9ULS5 P4HA3-202ENST00000427714 2248 ntTSL 2 BASIC20.61■□□□□ 0.89
TMCC3Q9ULS5 SH3GLB2-203ENST00000372564 2982 ntAPPRIS P1 TSL 1 (best) BASIC20.61■□□□□ 0.89
TMCC3Q9ULS5 PDIA2-201ENST00000219406 1698 ntAPPRIS P2 TSL 1 (best) BASIC20.61■□□□□ 0.89
TMCC3Q9ULS5 PLK5-202ENST00000454744 1930 ntAPPRIS P2 TSL 2 BASIC20.61■□□□□ 0.89
TMCC3Q9ULS5 FMR1-208ENST00000440235 4271 ntTSL 1 (best) BASIC20.6■□□□□ 0.89
TMCC3Q9ULS5 CLDN5-203ENST00000413119 1760 ntTSL 2 BASIC20.6■□□□□ 0.89
TMCC3Q9ULS5 AC007383.2-202ENST00000435627 482 ntTSL 2 BASIC20.6■□□□□ 0.89
TMCC3Q9ULS5 P4HA2-202ENST00000360568 2313 ntAPPRIS ALT1 TSL 1 (best) BASIC20.6■□□□□ 0.89
TMCC3Q9ULS5 TCP1-202ENST00000392168 1878 ntTSL 5 BASIC20.6■□□□□ 0.89
TMCC3Q9ULS5 SPINT2-201ENST00000301244 1802 ntAPPRIS P2 TSL 1 (best) BASIC20.6■□□□□ 0.89
TMCC3Q9ULS5 NHLH1-201ENST00000302101 2563 ntAPPRIS P1 TSL 1 (best) BASIC20.59■□□□□ 0.89
TMCC3Q9ULS5 SOBP-201ENST00000317357 5245 ntAPPRIS P1 TSL 5 BASIC20.59■□□□□ 0.89
TMCC3Q9ULS5 KRT18P60-201ENST00000312876 1297 ntBASIC20.59■□□□□ 0.89
TMCC3Q9ULS5 CDCA5-202ENST00000404147 1012 ntTSL 2 BASIC20.59■□□□□ 0.89
TMCC3Q9ULS5 MTERF3-201ENST00000287025 1409 ntAPPRIS P1 TSL 1 (best) BASIC20.59■□□□□ 0.89
TMCC3Q9ULS5 SLC22A23-205ENST00000436008 6641 ntAPPRIS ALT2 TSL 5 BASIC20.58■□□□□ 0.89
TMCC3Q9ULS5 NIPA2-202ENST00000359727 1531 ntTSL 1 (best) BASIC20.58■□□□□ 0.89
TMCC3Q9ULS5 CHADL-201ENST00000216241 2533 ntAPPRIS P1 TSL 1 (best) BASIC20.58■□□□□ 0.89
TMCC3Q9ULS5 RHCE-204ENST00000349320 1810 ntAPPRIS ALT2 TSL 2 BASIC20.58■□□□□ 0.89
TMCC3Q9ULS5 AUH-201ENST00000303617 1490 ntTSL 1 (best) BASIC20.58■□□□□ 0.89
TMCC3Q9ULS5 PPP5C-201ENST00000012443 2109 ntAPPRIS P1 TSL 1 (best) BASIC20.58■□□□□ 0.89
TMCC3Q9ULS5 CST6-201ENST00000312134 759 ntAPPRIS P1 TSL 1 (best) BASIC20.58■□□□□ 0.89
TMCC3Q9ULS5 OXLD1-201ENST00000374741 620 ntAPPRIS P1 TSL 1 (best) BASIC20.58■□□□□ 0.89
TMCC3Q9ULS5 AC009531.1-201ENST00000442323 580 ntTSL 4 BASIC20.58■□□□□ 0.89
TMCC3Q9ULS5 AC137767.1-201ENST00000602918 1920 ntBASIC20.58■□□□□ 0.88
TMCC3Q9ULS5 WRNIP1-204ENST00000380773 2670 ntAPPRIS P1 TSL 1 (best) BASIC20.58■□□□□ 0.88
TMCC3Q9ULS5 PFKP-201ENST00000381072 1698 ntTSL 1 (best) BASIC20.58■□□□□ 0.88
TMCC3Q9ULS5 NFKBID-201ENST00000396901 1834 ntAPPRIS P2 TSL 1 (best) BASIC20.57■□□□□ 0.88
TMCC3Q9ULS5 NFKBID-211ENST00000641389 1834 ntAPPRIS ALT2 BASIC20.57■□□□□ 0.88
TMCC3Q9ULS5 KMT2B-201ENST00000420124 8469 ntAPPRIS P1 TSL 1 (best) BASIC20.57■□□□□ 0.88
TMCC3Q9ULS5 ZFP69B-204ENST00000484445 1976 ntTSL 1 (best) BASIC20.57■□□□□ 0.88
TMCC3Q9ULS5 WRNIP1-203ENST00000380771 2595 ntTSL 1 (best) BASIC20.57■□□□□ 0.88
TMCC3Q9ULS5 SPOCK3-222ENST00000512681 1457 ntTSL 2 BASIC20.57■□□□□ 0.88
TMCC3Q9ULS5 TULP1-202ENST00000322263 1941 ntTSL 1 (best) BASIC20.57■□□□□ 0.88
TMCC3Q9ULS5 NOX4-204ENST00000393282 560 ntTSL 1 (best) BASIC20.57■□□□□ 0.88
TMCC3Q9ULS5 STEAP2-204ENST00000394626 2456 ntTSL 2 BASIC20.57■□□□□ 0.88
TMCC3Q9ULS5 AL136090.1-201ENST00000446849 366 ntTSL 3 BASIC20.57■□□□□ 0.88
TMCC3Q9ULS5 ZDHHC17-201ENST00000426126 5259 ntAPPRIS P1 TSL 1 (best) BASIC20.57■□□□□ 0.88
TMCC3Q9ULS5 NIPA2-203ENST00000398013 2280 ntAPPRIS P1 TSL 1 (best) BASIC20.57■□□□□ 0.88
TMCC3Q9ULS5 ZNF843-201ENST00000315678 2137 ntAPPRIS P2 TSL 2 BASIC20.57■□□□□ 0.88
TMCC3Q9ULS5 NOTUM-201ENST00000409678 2329 ntAPPRIS P1 TSL 1 (best) BASIC20.56■□□□□ 0.88
TMCC3Q9ULS5 R3HCC1-202ENST00000411463 1467 ntAPPRIS P5 TSL 5 BASIC20.56■□□□□ 0.88
TMCC3Q9ULS5 LMLN-210ENST00000482695 2010 ntAPPRIS ALT2 TSL 1 (best) BASIC20.56■□□□□ 0.88
TMCC3Q9ULS5 PAXBP1-201ENST00000290178 2564 ntTSL 1 (best) BASIC20.56■□□□□ 0.88
TMCC3Q9ULS5 SLC25A11-201ENST00000225665 1897 ntAPPRIS P1 TSL 1 (best) BASIC20.56■□□□□ 0.88
TMCC3Q9ULS5 DALRD3-206ENST00000441576 1706 ntTSL 1 (best) BASIC20.56■□□□□ 0.88
TMCC3Q9ULS5 TPM4-201ENST00000300933 2666 ntTSL 1 (best) BASIC20.56■□□□□ 0.88
TMCC3Q9ULS5 PRKACA-201ENST00000308677 2677 ntAPPRIS P1 TSL 1 (best) BASIC20.56■□□□□ 0.88
TMCC3Q9ULS5 SAMD13-205ENST00000370673 1567 ntTSL 2 BASIC20.56■□□□□ 0.88
TMCC3Q9ULS5 PNCK-215ENST00000447676 1585 ntTSL 2 BASIC20.56■□□□□ 0.88
TMCC3Q9ULS5 PRKAR1B-211ENST00000537384 2533 ntAPPRIS P1 TSL 5 BASIC20.56■□□□□ 0.88
TMCC3Q9ULS5 ARF1-213ENST00000540651 1972 ntAPPRIS P1 TSL 2 BASIC20.56■□□□□ 0.88
TMCC3Q9ULS5 AC120024.1-201ENST00000562672 995 ntBASIC20.56■□□□□ 0.88
TMCC3Q9ULS5 MMP25-AS1-209ENST00000576250 779 ntTSL 5 BASIC20.56■□□□□ 0.88
TMCC3Q9ULS5 AC005551.1-201ENST00000641816 493 ntAPPRIS P1 BASIC20.56■□□□□ 0.88
TMCC3Q9ULS5 AP006623.1-201ENST00000506172 2061 ntTSL 5 BASIC20.56■□□□□ 0.88
TMCC3Q9ULS5 TRAM2-AS1-204ENST00000606714 2453 ntTSL 2 BASIC20.56■□□□□ 0.88
TMCC3Q9ULS5 SPATA2L-201ENST00000289805 2335 ntAPPRIS P1 TSL 1 (best) BASIC20.56■□□□□ 0.88
TMCC3Q9ULS5 MMP21-201ENST00000368808 1919 ntAPPRIS P1 TSL 1 (best) BASIC20.56■□□□□ 0.88
TMCC3Q9ULS5 PGF-206ENST00000555567 1927 ntAPPRIS P3 TSL 1 (best) BASIC20.56■□□□□ 0.88
TMCC3Q9ULS5 STX5-201ENST00000294179 1794 ntAPPRIS P1 TSL 1 (best) BASIC20.56■□□□□ 0.88
TMCC3Q9ULS5 NPAS1-202ENST00000449844 2043 ntAPPRIS P1 TSL 1 (best) BASIC20.56■□□□□ 0.88
TMCC3Q9ULS5 IKBKG-211ENST00000615874 1460 ntTSL 5 BASIC20.56■□□□□ 0.88
TMCC3Q9ULS5 IKBKG-215ENST00000619941 1463 ntTSL 5 BASIC20.56■□□□□ 0.88
TMCC3Q9ULS5 FOXJ1-201ENST00000322957 2641 ntAPPRIS P1 TSL 1 (best) BASIC20.56■□□□□ 0.88
TMCC3Q9ULS5 COG8-201ENST00000562081 1731 ntAPPRIS P1 TSL 5 BASIC20.56■□□□□ 0.88
TMCC3Q9ULS5 IRX4-201ENST00000231357 2221 ntAPPRIS P1 TSL 1 (best) BASIC20.55■□□□□ 0.88
TMCC3Q9ULS5 TNFAIP2-209ENST00000560869 4683 ntAPPRIS P1 TSL 5 BASIC20.55■□□□□ 0.88
TMCC3Q9ULS5 AFDN-202ENST00000351017 5823 ntTSL 5 BASIC20.55■□□□□ 0.88
TMCC3Q9ULS5 CACNG2-201ENST00000300105 2384 ntAPPRIS P1 TSL 1 (best) BASIC20.55■□□□□ 0.88
TMCC3Q9ULS5 PNMA6A-201ENST00000421798 2209 ntAPPRIS P1 TSL 2 BASIC20.55■□□□□ 0.88
TMCC3Q9ULS5 SLC35A3-204ENST00000427993 2062 ntAPPRIS P1 TSL 5 BASIC20.55■□□□□ 0.88
TMCC3Q9ULS5 CACYBP-201ENST00000367679 2766 ntAPPRIS P1 TSL 1 (best) BASIC20.55■□□□□ 0.88
TMCC3Q9ULS5 SH2D3A-201ENST00000245908 2296 ntAPPRIS P1 TSL 1 (best) BASIC20.55■□□□□ 0.88
TMCC3Q9ULS5 MRGPRF-203ENST00000441623 2282 ntAPPRIS P1 TSL 2 BASIC20.55■□□□□ 0.88
TMCC3Q9ULS5 ZNF664-207ENST00000539644 5108 ntAPPRIS P1 TSL 1 (best) BASIC20.54■□□□□ 0.88
TMCC3Q9ULS5 KLF3-203ENST00000514033 1871 ntTSL 1 (best) BASIC20.54■□□□□ 0.88
TMCC3Q9ULS5 SNX18-203ENST00000381410 5218 ntAPPRIS P1 TSL 1 (best) BASIC20.54■□□□□ 0.88
TMCC3Q9ULS5 IL15RA-204ENST00000379977 1626 ntAPPRIS P3 TSL 1 (best) BASIC20.54■□□□□ 0.88
TMCC3Q9ULS5 PIP5KL1-202ENST00000388747 2198 ntAPPRIS P1 TSL 5 BASIC20.54■□□□□ 0.88
TMCC3Q9ULS5 ADAD2-201ENST00000268624 2283 ntAPPRIS P3 TSL 2 BASIC20.54■□□□□ 0.88
TMCC3Q9ULS5 LY6H-201ENST00000342752 951 ntAPPRIS ALT2 TSL 1 (best) BASIC20.54■□□□□ 0.88
TMCC3Q9ULS5 AL121899.1-202ENST00000411839 536 ntTSL 5 BASIC20.54■□□□□ 0.88
TMCC3Q9ULS5 LY6H-202ENST00000414417 1056 ntAPPRIS ALT2 TSL 1 (best) BASIC20.54■□□□□ 0.88
TMCC3Q9ULS5 LY6H-203ENST00000430474 925 ntAPPRIS P3 TSL 3 BASIC20.54■□□□□ 0.88
TMCC3Q9ULS5 AC092807.3-205ENST00000467666 531 ntTSL 3 BASIC20.54■□□□□ 0.88
TMCC3Q9ULS5 TMEM165-201ENST00000381334 1928 ntAPPRIS P1 TSL 1 (best) BASIC20.54■□□□□ 0.88
TMCC3Q9ULS5 TMEM200B-201ENST00000420504 2553 ntAPPRIS P1 TSL 1 (best) BASIC20.54■□□□□ 0.88
Retrieved 100 of 98,524 protein–RNA pairs in 72.1 ms