Protein–RNA interactions for Protein: Q9NVW2

RLIM, E3 ubiquitin-protein ligase RLIM, humanhuman

Predictions only

Length 624 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RLIMQ9NVW2 TMEM64-203ENST00000458549 4997 ntAPPRIS P1 TSL 1 (best) BASIC20.77■□□□□ 0.91
RLIMQ9NVW2 UBTF-213ENST00000533177 3011 ntTSL 5 BASIC20.76■□□□□ 0.91
RLIMQ9NVW2 IRX4-201ENST00000231357 2221 ntAPPRIS P1 TSL 1 (best) BASIC20.76■□□□□ 0.91
RLIMQ9NVW2 SETD9-201ENST00000285947 1619 ntAPPRIS P1 TSL 1 (best) BASIC20.76■□□□□ 0.91
RLIMQ9NVW2 TCP1-202ENST00000392168 1878 ntTSL 5 BASIC20.76■□□□□ 0.91
RLIMQ9NVW2 ZNF843-201ENST00000315678 2137 ntAPPRIS P2 TSL 2 BASIC20.76■□□□□ 0.91
RLIMQ9NVW2 ZFAND5-202ENST00000343431 1073 ntAPPRIS P1 TSL 5 BASIC20.76■□□□□ 0.91
RLIMQ9NVW2 RARRES2P1-201ENST00000474487 481 ntBASIC20.76■□□□□ 0.91
RLIMQ9NVW2 PLK5-202ENST00000454744 1930 ntAPPRIS P2 TSL 2 BASIC20.76■□□□□ 0.91
RLIMQ9NVW2 EPS8L1-202ENST00000245618 2198 ntTSL 1 (best) BASIC20.76■□□□□ 0.91
RLIMQ9NVW2 NBL1-202ENST00000375136 2172 ntAPPRIS P3 TSL 1 (best) BASIC20.76■□□□□ 0.91
RLIMQ9NVW2 SPINT2-201ENST00000301244 1802 ntAPPRIS P2 TSL 1 (best) BASIC20.76■□□□□ 0.91
RLIMQ9NVW2 AC079630.1-202ENST00000618127 1840 ntBASIC20.76■□□□□ 0.91
RLIMQ9NVW2 TRAM2-AS1-204ENST00000606714 2453 ntTSL 2 BASIC20.76■□□□□ 0.91
RLIMQ9NVW2 ECEL1P1-201ENST00000373592 1742 ntBASIC20.75■□□□□ 0.91
RLIMQ9NVW2 CREB3L3-205ENST00000602257 1475 ntAPPRIS ALT2 TSL 1 (best) BASIC20.75■□□□□ 0.91
RLIMQ9NVW2 C3orf58-207ENST00000495414 1876 ntTSL 2 BASIC20.75■□□□□ 0.91
RLIMQ9NVW2 AL117348.2-201ENST00000432920 1625 ntAPPRIS P1 TSL 2 BASIC20.75■□□□□ 0.91
RLIMQ9NVW2 LIMS2-202ENST00000355119 2045 ntAPPRIS ALT1 TSL 1 (best) BASIC20.75■□□□□ 0.91
RLIMQ9NVW2 AC021242.3-201ENST00000607598 1377 ntBASIC20.75■□□□□ 0.91
RLIMQ9NVW2 REST-206ENST00000612429 1376 ntTSL 5 BASIC20.75■□□□□ 0.91
RLIMQ9NVW2 REST-207ENST00000616975 1370 ntTSL 5 BASIC20.75■□□□□ 0.91
RLIMQ9NVW2 REST-212ENST00000640343 1352 ntTSL 1 (best) BASIC20.75■□□□□ 0.91
RLIMQ9NVW2 ZGPAT-201ENST00000328969 1945 ntTSL 2 BASIC20.75■□□□□ 0.91
RLIMQ9NVW2 STMN4-201ENST00000265770 1250 ntAPPRIS P1 TSL 1 (best) BASIC20.75■□□□□ 0.91
RLIMQ9NVW2 CNPY3-202ENST00000394142 954 ntTSL 5 BASIC20.75■□□□□ 0.91
RLIMQ9NVW2 AC090587.2-201ENST00000430222 527 ntTSL 2 BASIC20.75■□□□□ 0.91
RLIMQ9NVW2 AC026785.2-201ENST00000511821 867 ntTSL 2 BASIC20.75■□□□□ 0.91
RLIMQ9NVW2 IGFBP7-203ENST00000514062 1251 ntAPPRIS ALT2 TSL 2 BASIC20.75■□□□□ 0.91
RLIMQ9NVW2 ZNF180-205ENST00000587047 525 ntTSL 4 BASIC20.75■□□□□ 0.91
RLIMQ9NVW2 CLDND1-202ENST00000394180 2228 ntAPPRIS P1 TSL 1 (best) BASIC20.75■□□□□ 0.91
RLIMQ9NVW2 TMEM268-202ENST00000374049 4578 ntAPPRIS ALT1 TSL 5 BASIC20.75■□□□□ 0.91
RLIMQ9NVW2 DALRD3-206ENST00000441576 1706 ntTSL 1 (best) BASIC20.75■□□□□ 0.91
RLIMQ9NVW2 TDRKH-205ENST00000368827 2318 ntAPPRIS P2 TSL 1 (best) BASIC20.75■□□□□ 0.91
RLIMQ9NVW2 CADM1-201ENST00000331581 1766 ntTSL 1 (best) BASIC20.74■□□□□ 0.91
RLIMQ9NVW2 PNMA6A-201ENST00000421798 2209 ntAPPRIS P1 TSL 2 BASIC20.74■□□□□ 0.91
RLIMQ9NVW2 HMGA2-203ENST00000393578 1993 ntAPPRIS ALT1 TSL 1 (best) BASIC20.74■□□□□ 0.91
RLIMQ9NVW2 PPP5C-201ENST00000012443 2109 ntAPPRIS P1 TSL 1 (best) BASIC20.74■□□□□ 0.91
RLIMQ9NVW2 WDR86-201ENST00000334493 2023 ntAPPRIS P1 TSL 5 BASIC20.74■□□□□ 0.91
RLIMQ9NVW2 MFSD7-202ENST00000347950 1599 ntTSL 2 BASIC20.74■□□□□ 0.91
RLIMQ9NVW2 CLTA-204ENST00000433436 1235 ntAPPRIS ALT1 TSL 1 (best) BASIC20.74■□□□□ 0.91
RLIMQ9NVW2 CLTA-209ENST00000538225 1181 ntTSL 2 BASIC20.74■□□□□ 0.91
RLIMQ9NVW2 CLTA-210ENST00000540080 989 ntTSL 2 BASIC20.74■□□□□ 0.91
RLIMQ9NVW2 LTB4R-201ENST00000345363 1616 ntAPPRIS P1 TSL 1 (best) BASIC20.74■□□□□ 0.91
RLIMQ9NVW2 FARP2-223ENST00000627550 2122 ntTSL 2 BASIC20.74■□□□□ 0.91
RLIMQ9NVW2 TM9SF3-201ENST00000371142 6141 ntAPPRIS P1 TSL 1 (best) BASIC20.74■□□□□ 0.91
RLIMQ9NVW2 SIGMAR1-201ENST00000277010 1656 ntAPPRIS P1 TSL 1 (best) BASIC20.73■□□□□ 0.91
RLIMQ9NVW2 TSPAN17-207ENST00000508164 2457 ntTSL 1 (best) BASIC20.73■□□□□ 0.91
RLIMQ9NVW2 CELF5-201ENST00000292672 1854 ntAPPRIS P1 TSL 1 (best) BASIC20.73■□□□□ 0.91
RLIMQ9NVW2 PRSS29P-202ENST00000568091 1864 ntTSL 5 BASIC20.73■□□□□ 0.91
RLIMQ9NVW2 MTCH2-201ENST00000302503 2587 ntAPPRIS P1 TSL 1 (best) BASIC20.73■□□□□ 0.91
RLIMQ9NVW2 MRGPRF-203ENST00000441623 2282 ntAPPRIS P1 TSL 2 BASIC20.73■□□□□ 0.91
RLIMQ9NVW2 CCDC157-202ENST00000399824 1759 ntAPPRIS ALT2 TSL 1 (best) BASIC20.73■□□□□ 0.91
RLIMQ9NVW2 FOXJ1-201ENST00000322957 2641 ntAPPRIS P1 TSL 1 (best) BASIC20.73■□□□□ 0.91
RLIMQ9NVW2 BX664725.1-201ENST00000438252 379 ntBASIC20.73■□□□□ 0.91
RLIMQ9NVW2 RNF146-205ENST00000477776 762 ntTSL 3 BASIC20.73■□□□□ 0.91
RLIMQ9NVW2 DUSP22-214ENST00000605315 867 ntTSL 5 BASIC20.73■□□□□ 0.91
RLIMQ9NVW2 AC243829.1-202ENST00000618848 486 ntTSL 3 BASIC20.73■□□□□ 0.91
RLIMQ9NVW2 C2orf72-201ENST00000373640 3657 ntAPPRIS P1 TSL 2 BASIC20.73■□□□□ 0.91
RLIMQ9NVW2 NMI-201ENST00000243346 1623 ntAPPRIS P1 TSL 1 (best) BASIC20.73■□□□□ 0.91
RLIMQ9NVW2 SAMD8-202ENST00000372690 1654 ntTSL 1 (best) BASIC20.73■□□□□ 0.91
RLIMQ9NVW2 AL160276.1-201ENST00000636672 1312 ntAPPRIS P1 TSL 5 BASIC20.73■□□□□ 0.91
RLIMQ9NVW2 MSL1-203ENST00000577454 2081 ntTSL 2 BASIC20.73■□□□□ 0.91
RLIMQ9NVW2 PLD4-201ENST00000392593 6515 ntAPPRIS P3 TSL 1 (best) BASIC20.72■□□□□ 0.91
RLIMQ9NVW2 GUSB-201ENST00000304895 2300 ntAPPRIS P1 TSL 1 (best) BASIC20.72■□□□□ 0.91
RLIMQ9NVW2 FOSL1-202ENST00000448083 1427 ntTSL 2 BASIC20.72■□□□□ 0.91
RLIMQ9NVW2 PRMT5-228ENST00000627278 129 ntTSL 5 BASIC20.72■□□□□ 0.91
RLIMQ9NVW2 LAT-217ENST00000630764 610 ntAPPRIS ALT2 TSL 5 BASIC20.72■□□□□ 0.91
RLIMQ9NVW2 SH2D3A-201ENST00000245908 2296 ntAPPRIS P1 TSL 1 (best) BASIC20.72■□□□□ 0.91
RLIMQ9NVW2 DPH1-203ENST00000570477 1747 ntAPPRIS ALT2 TSL 2 BASIC20.72■□□□□ 0.91
RLIMQ9NVW2 SPG21-202ENST00000416889 1533 ntTSL 2 BASIC20.72■□□□□ 0.91
RLIMQ9NVW2 EGR3-203ENST00000519492 1500 ntTSL 5 BASIC20.72■□□□□ 0.91
RLIMQ9NVW2 OLIG2-202ENST00000382357 2578 ntAPPRIS P1 TSL 1 (best) BASIC20.72■□□□□ 0.91
RLIMQ9NVW2 BCL11B-203ENST00000443726 2599 ntAPPRIS ALT2 TSL 5 BASIC20.72■□□□□ 0.91
RLIMQ9NVW2 HNRNPD-202ENST00000352301 1667 ntAPPRIS ALT1 TSL 1 (best) BASIC20.71■□□□□ 0.91
RLIMQ9NVW2 RPP38-201ENST00000378197 1457 ntAPPRIS P1 TSL 1 (best) BASIC20.71■□□□□ 0.91
RLIMQ9NVW2 APOE-201ENST00000252486 1208 ntAPPRIS P1 TSL 1 (best) BASIC20.71■□□□□ 0.91
RLIMQ9NVW2 SMUG1-203ENST00000401977 1082 ntAPPRIS P1 TSL 5 BASIC20.71■□□□□ 0.91
RLIMQ9NVW2 AC011448.1-201ENST00000555938 1100 ntAPPRIS P1 TSL 2 BASIC20.71■□□□□ 0.91
RLIMQ9NVW2 DENND5A-201ENST00000328194 5031 ntAPPRIS P1 TSL 1 (best) BASIC20.71■□□□□ 0.91
RLIMQ9NVW2 LMLN-210ENST00000482695 2010 ntAPPRIS ALT2 TSL 1 (best) BASIC20.71■□□□□ 0.91
RLIMQ9NVW2 GNB2-201ENST00000303210 1878 ntAPPRIS P1 TSL 1 (best) BASIC20.71■□□□□ 0.91
RLIMQ9NVW2 WWC2-AS2-201ENST00000578387 2183 ntBASIC20.7■□□□□ 0.91
RLIMQ9NVW2 DAZAP1-211ENST00000592522 2157 ntAPPRIS ALT1 TSL 5 BASIC20.7■□□□□ 0.91
RLIMQ9NVW2 GCA-201ENST00000233612 1694 ntTSL 2 BASIC20.7■□□□□ 0.91
RLIMQ9NVW2 SMG7-AS1-201ENST00000421703 2220 ntTSL 1 (best) BASIC20.7■□□□□ 0.9
RLIMQ9NVW2 DLL3-202ENST00000356433 2055 ntAPPRIS P1 TSL 2 BASIC20.7■□□□□ 0.9
RLIMQ9NVW2 AP006623.1-201ENST00000506172 2061 ntTSL 5 BASIC20.7■□□□□ 0.9
RLIMQ9NVW2 DISC1-223ENST00000628350 2363 ntAPPRIS ALT2 TSL 1 (best) BASIC20.7■□□□□ 0.9
RLIMQ9NVW2 CTAG1B-201ENST00000328435 748 ntAPPRIS P1 TSL 1 (best) BASIC20.7■□□□□ 0.9
RLIMQ9NVW2 EBPL-205ENST00000378284 967 ntTSL 1 (best) BASIC20.7■□□□□ 0.9
RLIMQ9NVW2 CTAG1A-202ENST00000599837 748 ntAPPRIS P1 TSL 1 (best) BASIC20.7■□□□□ 0.9
RLIMQ9NVW2 UROS-204ENST00000368797 1313 ntAPPRIS P1 TSL 1 (best) BASIC20.7■□□□□ 0.9
RLIMQ9NVW2 SPATA2L-201ENST00000289805 2335 ntAPPRIS P1 TSL 1 (best) BASIC20.7■□□□□ 0.9
RLIMQ9NVW2 BCS1L-210ENST00000431802 2015 ntAPPRIS P1 TSL 2 BASIC20.7■□□□□ 0.9
RLIMQ9NVW2 SPSB3-208ENST00000566339 1784 ntAPPRIS P1 TSL 1 (best) BASIC20.69■□□□□ 0.9
RLIMQ9NVW2 SLC29A1-207ENST00000393841 2485 ntAPPRIS P1 TSL 2 BASIC20.69■□□□□ 0.9
RLIMQ9NVW2 NPW-201ENST00000329610 498 ntAPPRIS P2 TSL 1 (best) BASIC20.69■□□□□ 0.9
RLIMQ9NVW2 TMEM147-203ENST00000392205 767 ntTSL 2 BASIC20.69■□□□□ 0.9
RLIMQ9NVW2 MDK-203ENST00000395566 828 ntAPPRIS P2 TSL 1 (best) BASIC20.69■□□□□ 0.9
Retrieved 100 of 98,524 protein–RNA pairs in 13.3 ms