Protein–RNA interactions for Protein: Q9NRJ7

PCDHB16, Protocadherin beta-16, humanhuman

Predictions only

Length 776 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHB16Q9NRJ7 ANKHD1-204ENST00000394722 2035 ntTSL 1 (best) BASIC19.25■□□□□ 0.67
PCDHB16Q9NRJ7 B3GAT3-201ENST00000265471 1641 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
PCDHB16Q9NRJ7 AC098864.1-205ENST00000315302 2260 ntTSL 2 BASIC19.25■□□□□ 0.67
PCDHB16Q9NRJ7 REPIN1-214ENST00000489432 2058 ntAPPRIS ALT2 TSL 2 BASIC19.24■□□□□ 0.67
PCDHB16Q9NRJ7 EID2B-201ENST00000326282 1865 ntAPPRIS P1 BASIC19.24■□□□□ 0.67
PCDHB16Q9NRJ7 HS3ST3A1-201ENST00000284110 2527 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
PCDHB16Q9NRJ7 MPPED1-203ENST00000443721 2507 ntAPPRIS P1 TSL 2 BASIC19.24■□□□□ 0.67
PCDHB16Q9NRJ7 TMEM200B-202ENST00000521452 2501 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
PCDHB16Q9NRJ7 ZKSCAN7-206ENST00000431636 1692 ntTSL 1 (best) BASIC19.24■□□□□ 0.67
PCDHB16Q9NRJ7 PXK-202ENST00000356151 2037 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
PCDHB16Q9NRJ7 UFD1-201ENST00000263202 1814 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
PCDHB16Q9NRJ7 NDEL1-219ENST00000585098 454 ntTSL 3 BASIC19.24■□□□□ 0.67
PCDHB16Q9NRJ7 HOMER3-207ENST00000594794 903 ntTSL 5 BASIC19.24■□□□□ 0.67
PCDHB16Q9NRJ7 HNRNPUL1-221ENST00000617305 1018 ntTSL 1 (best) BASIC19.24■□□□□ 0.67
PCDHB16Q9NRJ7 CDC16-206ENST00000375310 2156 ntTSL 1 (best) BASIC19.24■□□□□ 0.67
PCDHB16Q9NRJ7 NMI-201ENST00000243346 1623 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
PCDHB16Q9NRJ7 ANKRD13D-202ENST00000447274 2881 ntTSL 1 (best) BASIC19.24■□□□□ 0.67
PCDHB16Q9NRJ7 KCNIP2-206ENST00000356640 1989 ntTSL 1 (best) BASIC19.24■□□□□ 0.67
PCDHB16Q9NRJ7 HACD1-202ENST00000361271 2237 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
PCDHB16Q9NRJ7 CCDC92-209ENST00000545891 1790 ntAPPRIS P1 TSL 2 BASIC19.24■□□□□ 0.67
PCDHB16Q9NRJ7 SLC52A2-211ENST00000532887 2147 ntAPPRIS P1 TSL 5 BASIC19.24■□□□□ 0.67
PCDHB16Q9NRJ7 FAM83D-201ENST00000619304 2475 ntTSL 1 (best) BASIC19.24■□□□□ 0.67
PCDHB16Q9NRJ7 CDC42BPB-201ENST00000361246 6758 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
PCDHB16Q9NRJ7 GJD4-201ENST00000321660 1580 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
PCDHB16Q9NRJ7 LAMC3-202ENST00000361069 6133 ntAPPRIS P1 TSL 2 BASIC19.23■□□□□ 0.67
PCDHB16Q9NRJ7 IRF3-228ENST00000601291 1556 ntTSL 1 (best) BASIC19.23■□□□□ 0.67
PCDHB16Q9NRJ7 ENTPD4-201ENST00000356206 2097 ntTSL 1 (best) BASIC19.23■□□□□ 0.67
PCDHB16Q9NRJ7 ENTPD4-203ENST00000417069 2063 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
PCDHB16Q9NRJ7 TNKS2-201ENST00000371627 6157 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
PCDHB16Q9NRJ7 AFDN-202ENST00000351017 5823 ntTSL 5 BASIC19.23■□□□□ 0.67
PCDHB16Q9NRJ7 ESYT2-201ENST00000251527 5960 ntAPPRIS P2 TSL 1 (best) BASIC19.23■□□□□ 0.67
PCDHB16Q9NRJ7 ACSF2-207ENST00000504392 1881 ntTSL 2 BASIC19.23■□□□□ 0.67
PCDHB16Q9NRJ7 ANXA8-204ENST00000583911 1874 ntTSL 2 BASIC19.23■□□□□ 0.67
PCDHB16Q9NRJ7 PRELID1-201ENST00000303204 1261 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
PCDHB16Q9NRJ7 TNFRSF12A-201ENST00000326577 1033 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
PCDHB16Q9NRJ7 CT47A7-201ENST00000434883 1288 ntAPPRIS P1 TSL 2 BASIC19.23■□□□□ 0.67
PCDHB16Q9NRJ7 AL136090.1-201ENST00000446849 366 ntTSL 3 BASIC19.23■□□□□ 0.67
PCDHB16Q9NRJ7 WT1-204ENST00000448076 2114 ntAPPRIS ALT2 TSL 2 BASIC19.23■□□□□ 0.67
PCDHB16Q9NRJ7 KCTD5-202ENST00000564195 774 ntTSL 5 BASIC19.23■□□□□ 0.67
PCDHB16Q9NRJ7 KMT2B-201ENST00000420124 8469 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
PCDHB16Q9NRJ7 SKIDA1-201ENST00000444772 2667 ntAPPRIS ALT2 TSL 5 BASIC19.23■□□□□ 0.67
PCDHB16Q9NRJ7 KCTD8-201ENST00000360029 2587 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
PCDHB16Q9NRJ7 RBM4B-203ENST00000525754 2339 ntAPPRIS P1 TSL 2 BASIC19.23■□□□□ 0.67
PCDHB16Q9NRJ7 UBE2K-201ENST00000261427 5245 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
PCDHB16Q9NRJ7 ZNF510-203ENST00000375231 5616 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
PCDHB16Q9NRJ7 KLC1-227ENST00000634686 2229 ntTSL 5 BASIC19.23■□□□□ 0.67
PCDHB16Q9NRJ7 HOMER3-204ENST00000539827 1979 ntAPPRIS P3 TSL 1 (best) BASIC19.23■□□□□ 0.67
PCDHB16Q9NRJ7 LGALS9C-201ENST00000328114 1730 ntAPPRIS P2 TSL 1 (best) BASIC19.22■□□□□ 0.67
PCDHB16Q9NRJ7 MEF2A-202ENST00000354410 5824 ntAPPRIS P3 TSL 1 (best) BASIC19.22■□□□□ 0.67
PCDHB16Q9NRJ7 ABHD6-201ENST00000295962 2393 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
PCDHB16Q9NRJ7 FKBP1B-202ENST00000380991 1010 ntTSL 1 (best) BASIC19.22■□□□□ 0.67
PCDHB16Q9NRJ7 C5orf38-202ENST00000397835 681 ntAPPRIS ALT2 TSL 5 BASIC19.22■□□□□ 0.67
PCDHB16Q9NRJ7 AC005540.1-201ENST00000413911 919 ntTSL 3 BASIC19.22■□□□□ 0.67
PCDHB16Q9NRJ7 LSM7-203ENST00000585409 512 ntTSL 2 BASIC19.22■□□□□ 0.67
PCDHB16Q9NRJ7 AC005551.1-201ENST00000641816 493 ntAPPRIS P1 BASIC19.22■□□□□ 0.67
PCDHB16Q9NRJ7 BX005266.2-202ENST00000446626 2245 ntTSL 1 (best) BASIC19.22■□□□□ 0.67
PCDHB16Q9NRJ7 FAM136A-201ENST00000037869 1810 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
PCDHB16Q9NRJ7 SNX18-203ENST00000381410 5218 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
PCDHB16Q9NRJ7 MYB-221ENST00000527615 2381 ntTSL 5 BASIC19.22■□□□□ 0.67
PCDHB16Q9NRJ7 FAM19A4-201ENST00000295569 2292 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
PCDHB16Q9NRJ7 PRSS29P-202ENST00000568091 1864 ntTSL 5 BASIC19.22■□□□□ 0.67
PCDHB16Q9NRJ7 ZFAND2B-201ENST00000289528 1314 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
PCDHB16Q9NRJ7 IKBKG-211ENST00000615874 1460 ntTSL 5 BASIC19.22■□□□□ 0.67
PCDHB16Q9NRJ7 IKBKG-215ENST00000619941 1463 ntTSL 5 BASIC19.22■□□□□ 0.67
PCDHB16Q9NRJ7 PHOX2B-201ENST00000226382 3030 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
PCDHB16Q9NRJ7 MAPK12-211ENST00000622558 1779 ntTSL 1 (best) BASIC19.21■□□□□ 0.67
PCDHB16Q9NRJ7 LZTS3-201ENST00000329152 5257 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
PCDHB16Q9NRJ7 BAZ1B-202ENST00000404251 5428 ntAPPRIS P1 TSL 2 BASIC19.21■□□□□ 0.67
PCDHB16Q9NRJ7 SPRED3-204ENST00000587013 1539 ntTSL 5 BASIC19.21■□□□□ 0.67
PCDHB16Q9NRJ7 RAVER2-201ENST00000294428 4398 ntAPPRIS ALT2 TSL 5 BASIC19.21■□□□□ 0.67
PCDHB16Q9NRJ7 H2AFY-204ENST00000423969 924 ntTSL 2 BASIC19.21■□□□□ 0.67
PCDHB16Q9NRJ7 FMR1-AS1-201ENST00000594922 2005 ntTSL 1 (best) BASIC19.21■□□□□ 0.67
PCDHB16Q9NRJ7 PTOV1-220ENST00000601675 1587 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
PCDHB16Q9NRJ7 ERO1A-211ENST00000629528 998 ntTSL 5 BASIC19.21■□□□□ 0.67
PCDHB16Q9NRJ7 AC064853.2-201ENST00000641246 144 ntAPPRIS P1 BASIC19.21■□□□□ 0.67
PCDHB16Q9NRJ7 VGLL2-201ENST00000326274 2212 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
PCDHB16Q9NRJ7 CIDEB-201ENST00000258807 2294 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
PCDHB16Q9NRJ7 GAS2L1-201ENST00000406549 1803 ntTSL 1 (best) BASIC19.21■□□□□ 0.67
PCDHB16Q9NRJ7 MSANTD3-207ENST00000622639 1748 ntAPPRIS P1 TSL 3 BASIC19.2■□□□□ 0.66
PCDHB16Q9NRJ7 PTH1R-202ENST00000418619 2070 ntAPPRIS P1 TSL 5 BASIC19.2■□□□□ 0.66
PCDHB16Q9NRJ7 AKT1S1-204ENST00000391832 1911 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
PCDHB16Q9NRJ7 CTNND2-201ENST00000304623 5481 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
PCDHB16Q9NRJ7 MAPKAPK5-AS1-201ENST00000428207 2290 ntTSL 1 (best) BASIC19.2■□□□□ 0.66
PCDHB16Q9NRJ7 IMPDH1-210ENST00000480861 1765 ntAPPRIS P2 TSL 2 BASIC19.2■□□□□ 0.66
PCDHB16Q9NRJ7 H2AFB1-201ENST00000620016 587 ntAPPRIS P1 BASIC19.2■□□□□ 0.66
PCDHB16Q9NRJ7 SMIM10L2A-201ENST00000417443 5230 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
PCDHB16Q9NRJ7 AUH-201ENST00000303617 1490 ntTSL 1 (best) BASIC19.2■□□□□ 0.66
PCDHB16Q9NRJ7 DONSON-201ENST00000303071 2170 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
PCDHB16Q9NRJ7 SLC2A8-203ENST00000373371 2172 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
PCDHB16Q9NRJ7 NKX2-4-201ENST00000351817 2238 ntAPPRIS P1 TSL 5 BASIC19.2■□□□□ 0.66
PCDHB16Q9NRJ7 EGR3-203ENST00000519492 1500 ntTSL 5 BASIC19.2■□□□□ 0.66
PCDHB16Q9NRJ7 IGF2-AS-201ENST00000381361 2063 ntTSL 2 BASIC19.2■□□□□ 0.66
PCDHB16Q9NRJ7 DENND1B-204ENST00000367396 2177 ntAPPRIS P3 TSL 1 (best) BASIC19.19■□□□□ 0.66
PCDHB16Q9NRJ7 SRI-201ENST00000265729 2010 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
PCDHB16Q9NRJ7 QDPR-202ENST00000428702 1278 ntTSL 2 BASIC19.19■□□□□ 0.66
PCDHB16Q9NRJ7 AC004448.1-201ENST00000458332 883 ntBASIC19.19■□□□□ 0.66
PCDHB16Q9NRJ7 QDPR-208ENST00000513615 1188 ntTSL 2 BASIC19.19■□□□□ 0.66
PCDHB16Q9NRJ7 MMP25-AS1-209ENST00000576250 779 ntTSL 5 BASIC19.19■□□□□ 0.66
PCDHB16Q9NRJ7 AKT1-201ENST00000349310 2866 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
PCDHB16Q9NRJ7 ADORA2B-201ENST00000304222 1735 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
Retrieved 100 of 98,524 protein–RNA pairs in 15.4 ms