Protein–RNA interactions for Protein: Q9HBL6

LRTM1, Leucine-rich repeat and transmembrane domain-containing protein 1, humanhuman

Predictions only

Length 345 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LRTM1Q9HBL6 GAL3ST1-202ENST00000401975 1791 ntAPPRIS P1 TSL 1 (best) BASIC21.42■■□□□ 1.02
LRTM1Q9HBL6 CLTA-204ENST00000433436 1235 ntAPPRIS ALT1 TSL 1 (best) BASIC21.42■■□□□ 1.02
LRTM1Q9HBL6 AP006623.1-201ENST00000506172 2061 ntTSL 5 BASIC21.42■■□□□ 1.02
LRTM1Q9HBL6 CLTA-209ENST00000538225 1181 ntTSL 2 BASIC21.42■■□□□ 1.02
LRTM1Q9HBL6 CLTA-210ENST00000540080 989 ntTSL 2 BASIC21.42■■□□□ 1.02
LRTM1Q9HBL6 COG8-201ENST00000562081 1731 ntAPPRIS P1 TSL 5 BASIC21.42■■□□□ 1.02
LRTM1Q9HBL6 ASPSCR1-208ENST00000580534 1776 ntTSL 2 BASIC21.42■■□□□ 1.02
LRTM1Q9HBL6 ZNF180-205ENST00000587047 525 ntTSL 4 BASIC21.42■■□□□ 1.02
LRTM1Q9HBL6 TMEM240-203ENST00000624426 796 ntTSL 3 BASIC21.42■■□□□ 1.02
LRTM1Q9HBL6 PPP4C-214ENST00000627746 1301 ntTSL 5 BASIC21.42■■□□□ 1.02
LRTM1Q9HBL6 B3GALT6-201ENST00000379198 2777 ntAPPRIS P1 BASIC21.42■■□□□ 1.02
LRTM1Q9HBL6 UBE3C-209ENST00000611269 1866 ntTSL 2 BASIC21.41■■□□□ 1.02
LRTM1Q9HBL6 FAM129C-211ENST00000600871 1822 ntAPPRIS ALT2 TSL 5 BASIC21.41■■□□□ 1.02
LRTM1Q9HBL6 ODF3L2-201ENST00000315489 1604 ntAPPRIS P2 TSL 1 (best) BASIC21.41■■□□□ 1.02
LRTM1Q9HBL6 AC021242.3-201ENST00000607598 1377 ntBASIC21.41■■□□□ 1.02
LRTM1Q9HBL6 HNRNPM-202ENST00000348943 2568 ntAPPRIS ALT2 TSL 1 (best) BASIC21.41■■□□□ 1.02
LRTM1Q9HBL6 NPW-201ENST00000329610 498 ntAPPRIS P2 TSL 1 (best) BASIC21.41■■□□□ 1.02
LRTM1Q9HBL6 MIR6722-201ENST00000617286 78 ntBASIC21.41■■□□□ 1.02
LRTM1Q9HBL6 EYA2-203ENST00000357410 2465 ntTSL 1 (best) BASIC21.41■■□□□ 1.02
LRTM1Q9HBL6 TMEM235-205ENST00000586400 2272 ntTSL 1 (best) BASIC21.41■■□□□ 1.02
LRTM1Q9HBL6 VGLL2-201ENST00000326274 2212 ntAPPRIS P1 TSL 1 (best) BASIC21.41■■□□□ 1.02
LRTM1Q9HBL6 GPSM1-204ENST00000429455 2057 ntTSL 3 BASIC21.41■■□□□ 1.02
LRTM1Q9HBL6 ZNF444-201ENST00000337080 2042 ntAPPRIS P3 TSL 1 (best) BASIC21.41■■□□□ 1.02
LRTM1Q9HBL6 XBP1-201ENST00000216037 1850 ntAPPRIS P2 TSL 1 (best) BASIC21.41■■□□□ 1.02
LRTM1Q9HBL6 CCDC7-201ENST00000277657 1899 ntAPPRIS P2 TSL 1 (best) BASIC21.41■■□□□ 1.02
LRTM1Q9HBL6 CELF5-201ENST00000292672 1854 ntAPPRIS P1 TSL 1 (best) BASIC21.41■■□□□ 1.02
LRTM1Q9HBL6 SH3YL1-201ENST00000356150 1763 ntAPPRIS P1 TSL 1 (best) BASIC21.41■■□□□ 1.02
LRTM1Q9HBL6 ZNF395-210ENST00000523095 1790 ntAPPRIS P1 TSL 1 (best) BASIC21.41■■□□□ 1.02
LRTM1Q9HBL6 ECEL1P1-201ENST00000373592 1742 ntBASIC21.41■■□□□ 1.02
LRTM1Q9HBL6 DPH1-203ENST00000570477 1747 ntAPPRIS ALT2 TSL 2 BASIC21.41■■□□□ 1.02
LRTM1Q9HBL6 EN1-201ENST00000295206 2457 ntAPPRIS P1 TSL 2 BASIC21.4■■□□□ 1.02
LRTM1Q9HBL6 KAT2B-201ENST00000263754 4833 ntAPPRIS P1 TSL 1 (best) BASIC21.4■■□□□ 1.02
LRTM1Q9HBL6 RPP38-207ENST00000616640 1537 ntAPPRIS P1 TSL 2 BASIC21.4■■□□□ 1.02
LRTM1Q9HBL6 RNF39-201ENST00000244360 2206 ntAPPRIS P1 TSL 1 (best) BASIC21.4■■□□□ 1.02
LRTM1Q9HBL6 RPP38-201ENST00000378197 1457 ntAPPRIS P1 TSL 1 (best) BASIC21.4■■□□□ 1.02
LRTM1Q9HBL6 PRELID2-201ENST00000334744 2140 ntTSL 2 BASIC21.4■■□□□ 1.02
LRTM1Q9HBL6 MSL1-203ENST00000577454 2081 ntTSL 2 BASIC21.4■■□□□ 1.02
LRTM1Q9HBL6 AC005703.6-201ENST00000623265 1329 ntBASIC21.4■■□□□ 1.02
LRTM1Q9HBL6 RAB33A-201ENST00000257017 1258 ntAPPRIS P1 TSL 1 (best) BASIC21.4■■□□□ 1.02
LRTM1Q9HBL6 BX664725.1-201ENST00000438252 379 ntBASIC21.4■■□□□ 1.02
LRTM1Q9HBL6 LINC01925-201ENST00000579492 500 ntTSL 5 BASIC21.4■■□□□ 1.02
LRTM1Q9HBL6 SLC25A11-201ENST00000225665 1897 ntAPPRIS P1 TSL 1 (best) BASIC21.4■■□□□ 1.02
LRTM1Q9HBL6 LINC00526-201ENST00000581067 1875 ntBASIC21.4■■□□□ 1.02
LRTM1Q9HBL6 STK25-234ENST00000535007 2459 ntTSL 2 BASIC21.4■■□□□ 1.02
LRTM1Q9HBL6 JAGN1-201ENST00000307768 1693 ntAPPRIS P1 TSL 1 (best) BASIC21.4■■□□□ 1.02
LRTM1Q9HBL6 TGIF1-206ENST00000405385 1689 ntTSL 2 BASIC21.4■■□□□ 1.02
LRTM1Q9HBL6 AC012645.1-201ENST00000515455 1650 ntTSL 1 (best) BASIC21.4■■□□□ 1.02
LRTM1Q9HBL6 ZDHHC16-203ENST00000353979 1647 ntTSL 1 (best) BASIC21.4■■□□□ 1.02
LRTM1Q9HBL6 KCNIP1-201ENST00000328939 2014 ntAPPRIS P1 TSL 1 (best) BASIC21.39■■□□□ 1.02
LRTM1Q9HBL6 TULP1-202ENST00000322263 1941 ntTSL 1 (best) BASIC21.39■■□□□ 1.02
LRTM1Q9HBL6 MIR222HG-201ENST00000602461 1379 ntTSL 5 BASIC21.39■■□□□ 1.02
LRTM1Q9HBL6 AC090587.2-201ENST00000430222 527 ntTSL 2 BASIC21.39■■□□□ 1.01
LRTM1Q9HBL6 PRR7-204ENST00000510492 1285 ntAPPRIS P1 TSL 1 (best) BASIC21.39■■□□□ 1.01
LRTM1Q9HBL6 FAHD1-204ENST00000615972 757 ntTSL 5 BASIC21.39■■□□□ 1.01
LRTM1Q9HBL6 CACNG2-201ENST00000300105 2384 ntAPPRIS P1 TSL 1 (best) BASIC21.39■■□□□ 1.01
LRTM1Q9HBL6 CREG1-201ENST00000370509 1974 ntAPPRIS P1 TSL 1 (best) BASIC21.39■■□□□ 1.01
LRTM1Q9HBL6 FNTA-208ENST00000529687 1950 ntTSL 2 BASIC21.39■■□□□ 1.01
LRTM1Q9HBL6 TDRKH-206ENST00000440583 2296 ntTSL 5 BASIC21.39■■□□□ 1.01
LRTM1Q9HBL6 FMNL2-201ENST00000288670 5575 ntAPPRIS P1 TSL 1 (best) BASIC21.39■■□□□ 1.01
LRTM1Q9HBL6 RYK-208ENST00000620660 2942 ntAPPRIS P3 TSL 1 (best) BASIC21.39■■□□□ 1.01
LRTM1Q9HBL6 SESN3-202ENST00000416495 1408 ntTSL 1 (best) BASIC21.38■■□□□ 1.01
LRTM1Q9HBL6 ZNF503-AS2-202ENST00000466942 1430 ntTSL 2 BASIC21.38■■□□□ 1.01
LRTM1Q9HBL6 RASSF5-202ENST00000579436 2064 ntAPPRIS P1 TSL 1 (best) BASIC21.38■■□□□ 1.01
LRTM1Q9HBL6 BLOC1S4-201ENST00000320776 1617 ntAPPRIS P1 BASIC21.38■■□□□ 1.01
LRTM1Q9HBL6 ZFAND5-202ENST00000343431 1073 ntAPPRIS P1 TSL 5 BASIC21.38■■□□□ 1.01
LRTM1Q9HBL6 AC026785.2-201ENST00000511821 867 ntTSL 2 BASIC21.38■■□□□ 1.01
LRTM1Q9HBL6 IGFBP7-203ENST00000514062 1251 ntAPPRIS ALT2 TSL 2 BASIC21.38■■□□□ 1.01
LRTM1Q9HBL6 ACOT1-202ENST00000557556 1271 ntTSL 1 (best) BASIC21.38■■□□□ 1.01
LRTM1Q9HBL6 KIF2A-202ENST00000401507 2539 ntAPPRIS P1 TSL 1 (best) BASIC21.38■■□□□ 1.01
LRTM1Q9HBL6 ASPSCR1-202ENST00000306739 1843 ntAPPRIS P3 TSL 1 (best) BASIC21.38■■□□□ 1.01
LRTM1Q9HBL6 RIOX1-201ENST00000304061 2429 ntAPPRIS P1 BASIC21.38■■□□□ 1.01
LRTM1Q9HBL6 POLR2J2-202ENST00000358438 2065 ntAPPRIS ALT2 TSL 1 (best) BASIC21.38■■□□□ 1.01
LRTM1Q9HBL6 FOSL1-202ENST00000448083 1427 ntTSL 2 BASIC21.38■■□□□ 1.01
LRTM1Q9HBL6 ZFP69B-204ENST00000484445 1976 ntTSL 1 (best) BASIC21.37■■□□□ 1.01
LRTM1Q9HBL6 SLC35F4-206ENST00000556826 1908 ntAPPRIS P1 TSL 5 BASIC21.37■■□□□ 1.01
LRTM1Q9HBL6 AC004980.1-201ENST00000418663 2667 ntTSL 1 (best) BASIC21.37■■□□□ 1.01
LRTM1Q9HBL6 NRSN1-204ENST00000378491 2354 ntAPPRIS P1 TSL 1 (best) BASIC21.37■■□□□ 1.01
LRTM1Q9HBL6 AC093323.1-201ENST00000307533 2311 ntTSL 1 (best) BASIC21.37■■□□□ 1.01
LRTM1Q9HBL6 PRTG-204ENST00000561292 833 ntTSL 3 BASIC21.37■■□□□ 1.01
LRTM1Q9HBL6 AC009163.4-201ENST00000567194 530 ntAPPRIS P1 TSL 2 BASIC21.37■■□□□ 1.01
LRTM1Q9HBL6 IER5L-201ENST00000372491 2711 ntAPPRIS P1 BASIC21.37■■□□□ 1.01
LRTM1Q9HBL6 LSR-203ENST00000360798 1963 ntTSL 2 BASIC21.37■■□□□ 1.01
LRTM1Q9HBL6 PTPN13-205ENST00000502971 1708 ntTSL 1 (best) BASIC21.37■■□□□ 1.01
LRTM1Q9HBL6 LSR-202ENST00000354900 2105 ntAPPRIS ALT2 TSL 1 (best) BASIC21.37■■□□□ 1.01
LRTM1Q9HBL6 SYNDIG1-201ENST00000376862 2522 ntAPPRIS P1 TSL 1 (best) BASIC21.36■■□□□ 1.01
LRTM1Q9HBL6 UTS2R-201ENST00000313135 1357 ntAPPRIS P1 BASIC21.36■■□□□ 1.01
LRTM1Q9HBL6 PLPP1-202ENST00000307259 1597 ntAPPRIS ALT1 TSL 1 (best) BASIC21.36■■□□□ 1.01
LRTM1Q9HBL6 VSX1-205ENST00000429762 1977 ntTSL 1 (best) BASIC21.36■■□□□ 1.01
LRTM1Q9HBL6 AC112229.4-201ENST00000488671 1528 ntTSL 2 BASIC21.36■■□□□ 1.01
LRTM1Q9HBL6 MTCH2-201ENST00000302503 2587 ntAPPRIS P1 TSL 1 (best) BASIC21.36■■□□□ 1.01
LRTM1Q9HBL6 TPI1-210ENST00000613953 1460 ntTSL 1 (best) BASIC21.36■■□□□ 1.01
LRTM1Q9HBL6 G6PD-202ENST00000393562 2631 ntAPPRIS P3 TSL 1 (best) BASIC21.36■■□□□ 1.01
LRTM1Q9HBL6 G6PD-211ENST00000621232 2631 ntAPPRIS ALT2 TSL 1 (best) BASIC21.36■■□□□ 1.01
LRTM1Q9HBL6 SRPK3-202ENST00000370101 1958 ntAPPRIS P3 TSL 1 (best) BASIC21.36■■□□□ 1.01
LRTM1Q9HBL6 PARD3-202ENST00000346874 5894 ntAPPRIS ALT2 TSL 1 (best) BASIC21.35■■□□□ 1.01
LRTM1Q9HBL6 PARD3-203ENST00000350537 5867 ntAPPRIS ALT2 TSL 1 (best) BASIC21.35■■□□□ 1.01
LRTM1Q9HBL6 NFIX-203ENST00000397661 3143 ntTSL 5 BASIC21.35■■□□□ 1.01
LRTM1Q9HBL6 FIZ1-201ENST00000221665 2660 ntAPPRIS P1 TSL 1 (best) BASIC21.35■■□□□ 1.01
LRTM1Q9HBL6 ASCC1-204ENST00000394915 1510 ntTSL 5 BASIC21.35■■□□□ 1.01
LRTM1Q9HBL6 PNMA6A-201ENST00000421798 2209 ntAPPRIS P1 TSL 2 BASIC21.35■■□□□ 1.01
Retrieved 100 of 98,524 protein–RNA pairs in 48 ms