Protein–RNA interactions for Protein: Q9HBD1

RC3H2, Roquin-2, humanhuman

Known RBP Predictions only

Length 1,191 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RC3H2Q9HBD1 ENTPD5-206ENST00000556242 1437 ntTSL 5 BASIC24.1■■□□□ 1.45
RC3H2Q9HBD1 RNASEH2B-201ENST00000336617 1629 ntAPPRIS P1 TSL 1 (best) BASIC24.1■■□□□ 1.45
RC3H2Q9HBD1 GXYLT1P2-201ENST00000433312 1230 ntBASIC24.1■■□□□ 1.45
RC3H2Q9HBD1 AP005435.1-201ENST00000529293 1178 ntBASIC24.1■■□□□ 1.45
RC3H2Q9HBD1 ANAPC11-219ENST00000583839 499 ntAPPRIS P1 TSL 2 BASIC24.1■■□□□ 1.45
RC3H2Q9HBD1 FP325331.1-202ENST00000623531 1380 ntBASIC24.1■■□□□ 1.45
RC3H2Q9HBD1 PKIB-204ENST00000368448 1561 ntAPPRIS P1 TSL 5 BASIC24.1■■□□□ 1.45
RC3H2Q9HBD1 ARIH2OS-201ENST00000408959 1598 ntAPPRIS P1 BASIC24.1■■□□□ 1.45
RC3H2Q9HBD1 HNRNPD-202ENST00000352301 1667 ntAPPRIS ALT1 TSL 1 (best) BASIC24.1■■□□□ 1.45
RC3H2Q9HBD1 SLC35A2-210ENST00000616181 1614 ntTSL 2 BASIC24.1■■□□□ 1.45
RC3H2Q9HBD1 HSD11B1L-206ENST00000423665 1525 ntAPPRIS ALT2 TSL 1 (best) BASIC24.1■■□□□ 1.45
RC3H2Q9HBD1 SOCS1-201ENST00000332029 1225 ntAPPRIS P1 TSL 1 (best) BASIC24.09■■□□□ 1.45
RC3H2Q9HBD1 UHRF2-202ENST00000381373 802 ntTSL 3 BASIC24.09■■□□□ 1.45
RC3H2Q9HBD1 RNF208-201ENST00000391553 1077 ntAPPRIS P1 BASIC24.09■■□□□ 1.45
RC3H2Q9HBD1 RNF208-202ENST00000392827 1135 ntAPPRIS P1 TSL 5 BASIC24.09■■□□□ 1.45
RC3H2Q9HBD1 ITGA9-AS1-210ENST00000457661 738 ntTSL 4 BASIC24.09■■□□□ 1.45
RC3H2Q9HBD1 KRT18P61-201ENST00000585825 1298 ntBASIC24.09■■□□□ 1.45
RC3H2Q9HBD1 AP2S1-203ENST00000593442 636 ntTSL 2 BASIC24.09■■□□□ 1.45
RC3H2Q9HBD1 CTBP2-211ENST00000494626 2014 ntAPPRIS P1 TSL 1 (best) BASIC24.09■■□□□ 1.45
RC3H2Q9HBD1 CTBP1-201ENST00000290921 2297 ntTSL 1 (best) BASIC24.09■■□□□ 1.45
RC3H2Q9HBD1 BBC3-202ENST00000341983 1538 ntTSL 1 (best) BASIC24.09■■□□□ 1.45
RC3H2Q9HBD1 RASD1-202ENST00000579152 1404 ntTSL 2 BASIC24.09■■□□□ 1.45
RC3H2Q9HBD1 ZC3H14-223ENST00000557607 1983 ntTSL 5 BASIC24.09■■□□□ 1.45
RC3H2Q9HBD1 AVPR2-203ENST00000370049 1307 ntTSL 1 (best) BASIC24.09■■□□□ 1.45
RC3H2Q9HBD1 GSR-204ENST00000537535 1323 ntTSL 1 (best) BASIC24.09■■□□□ 1.45
RC3H2Q9HBD1 CADPS-215ENST00000490353 2669 ntTSL 5 BASIC24.08■■□□□ 1.45
RC3H2Q9HBD1 SDC3-202ENST00000339394 1580 ntAPPRIS P1 TSL 1 (best) BASIC24.08■■□□□ 1.45
RC3H2Q9HBD1 NDUFS3-201ENST00000263774 958 ntAPPRIS P1 TSL 1 (best) BASIC24.08■■□□□ 1.45
RC3H2Q9HBD1 MOSPD3-202ENST00000379527 1016 ntAPPRIS P1 TSL 5 BASIC24.08■■□□□ 1.45
RC3H2Q9HBD1 PGAP3-204ENST00000429199 970 ntTSL 2 BASIC24.08■■□□□ 1.45
RC3H2Q9HBD1 SMARCB1-201ENST00000263121 1690 ntAPPRIS P3 TSL 1 (best) BASIC24.08■■□□□ 1.44
RC3H2Q9HBD1 GLI4-201ENST00000340042 1341 ntAPPRIS P1 TSL 1 (best) BASIC24.08■■□□□ 1.44
RC3H2Q9HBD1 FAM102B-202ENST00000405454 1585 ntAPPRIS ALT2 TSL 5 BASIC24.08■■□□□ 1.44
RC3H2Q9HBD1 UFD1-201ENST00000263202 1814 ntAPPRIS P1 TSL 1 (best) BASIC24.07■■□□□ 1.44
RC3H2Q9HBD1 TMEM202-AS1-202ENST00000565181 2325 ntBASIC24.07■■□□□ 1.44
RC3H2Q9HBD1 ADSSL1-202ENST00000332972 1969 ntTSL 1 (best) BASIC24.07■■□□□ 1.44
RC3H2Q9HBD1 NRG1-210ENST00000520407 1955 ntTSL 1 (best) BASIC24.07■■□□□ 1.44
RC3H2Q9HBD1 MYPOP-201ENST00000322217 1890 ntAPPRIS P1 TSL 1 (best) BASIC24.07■■□□□ 1.44
RC3H2Q9HBD1 CAMKMT-202ENST00000402247 665 ntTSL 2 BASIC24.07■■□□□ 1.44
RC3H2Q9HBD1 DENND3-207ENST00000518347 850 ntTSL 2 BASIC24.07■■□□□ 1.44
RC3H2Q9HBD1 ELANE-202ENST00000590230 1028 ntAPPRIS P1 TSL 5 BASIC24.07■■□□□ 1.44
RC3H2Q9HBD1 LGI4-206ENST00000591633 1113 ntTSL 1 (best) BASIC24.07■■□□□ 1.44
RC3H2Q9HBD1 MRM1-203ENST00000612760 1284 ntTSL 1 (best) BASIC24.07■■□□□ 1.44
RC3H2Q9HBD1 MESP2-201ENST00000341735 1552 ntAPPRIS P1 TSL 1 (best) BASIC24.07■■□□□ 1.44
RC3H2Q9HBD1 MPST-204ENST00000404393 1329 ntTSL 5 BASIC24.07■■□□□ 1.44
RC3H2Q9HBD1 XBP1-207ENST00000611155 1794 ntTSL 5 BASIC24.06■■□□□ 1.44
RC3H2Q9HBD1 GPR35-204ENST00000430267 1399 ntAPPRIS ALT2 TSL 5 BASIC24.06■■□□□ 1.44
RC3H2Q9HBD1 SPIRE2-205ENST00000563972 1823 ntTSL 1 (best) BASIC24.06■■□□□ 1.44
RC3H2Q9HBD1 RAMP2-201ENST00000253796 780 ntAPPRIS P2 TSL 1 (best) BASIC24.06■■□□□ 1.44
RC3H2Q9HBD1 MIR31HG-201ENST00000304425 745 ntTSL 2 BASIC24.06■■□□□ 1.44
RC3H2Q9HBD1 NT5C3AP1-201ENST00000394500 1012 ntBASIC24.06■■□□□ 1.44
RC3H2Q9HBD1 MYD88-205ENST00000424893 1279 ntAPPRIS ALT2 TSL 1 (best) BASIC24.06■■□□□ 1.44
RC3H2Q9HBD1 USF3-203ENST00000491165 2133 ntAPPRIS ALT2 TSL 1 (best) BASIC24.06■■□□□ 1.44
RC3H2Q9HBD1 AC007773.1-201ENST00000592680 972 ntTSL 2 BASIC24.06■■□□□ 1.44
RC3H2Q9HBD1 AC004528.2-201ENST00000610701 440 ntTSL 5 BASIC24.06■■□□□ 1.44
RC3H2Q9HBD1 LAYN-209ENST00000533265 1703 ntTSL 5 BASIC24.06■■□□□ 1.44
RC3H2Q9HBD1 XBP1-201ENST00000216037 1850 ntAPPRIS P2 TSL 1 (best) BASIC24.06■■□□□ 1.44
RC3H2Q9HBD1 MRPL37-202ENST00000360840 1483 ntAPPRIS P1 TSL 1 (best) BASIC24.06■■□□□ 1.44
RC3H2Q9HBD1 COMT-206ENST00000407537 1457 ntAPPRIS P3 TSL 5 BASIC24.06■■□□□ 1.44
RC3H2Q9HBD1 SUGCT-201ENST00000335693 1645 ntAPPRIS ALT2 TSL 1 (best) BASIC24.06■■□□□ 1.44
RC3H2Q9HBD1 INPP5J-206ENST00000404453 1613 ntTSL 1 (best) BASIC24.06■■□□□ 1.44
RC3H2Q9HBD1 LHX3-201ENST00000371746 2403 ntAPPRIS P1 TSL 1 (best) BASIC24.05■■□□□ 1.44
RC3H2Q9HBD1 NAE1-204ENST00000394074 1654 ntTSL 5 BASIC24.05■■□□□ 1.44
RC3H2Q9HBD1 MAP2K2-201ENST00000262948 1734 ntAPPRIS P1 TSL 1 (best) BASIC24.05■■□□□ 1.44
RC3H2Q9HBD1 CLN3-207ENST00000395653 1430 ntTSL 5 BASIC24.05■■□□□ 1.44
RC3H2Q9HBD1 OXSR1-203ENST00000446845 1908 ntTSL 5 BASIC24.05■■□□□ 1.44
RC3H2Q9HBD1 NKIRAS2-204ENST00000393880 1644 ntAPPRIS P1 TSL 2 BASIC24.05■■□□□ 1.44
RC3H2Q9HBD1 RAB24-201ENST00000303251 1311 ntAPPRIS P1 TSL 1 (best) BASIC24.05■■□□□ 1.44
RC3H2Q9HBD1 PDIA6-201ENST00000272227 2338 ntAPPRIS P3 TSL 1 (best) BASIC24.05■■□□□ 1.44
RC3H2Q9HBD1 C1QTNF4-201ENST00000302514 1664 ntAPPRIS P1 TSL 1 (best) BASIC24.05■■□□□ 1.44
RC3H2Q9HBD1 AC135731.1-201ENST00000569415 2548 ntBASIC24.05■■□□□ 1.44
RC3H2Q9HBD1 FGF19-201ENST00000294312 2447 ntAPPRIS P1 TSL 1 (best) BASIC24.04■■□□□ 1.44
RC3H2Q9HBD1 EIF3J-202ENST00000424492 1550 ntTSL 4 BASIC24.04■■□□□ 1.44
RC3H2Q9HBD1 KREMEN2-205ENST00000575769 1922 ntAPPRIS ALT2 TSL 1 (best) BASIC24.04■■□□□ 1.44
RC3H2Q9HBD1 CDH23-206ENST00000398842 1759 ntTSL 5 BASIC24.04■■□□□ 1.44
RC3H2Q9HBD1 ARF1-213ENST00000540651 1972 ntAPPRIS P1 TSL 2 BASIC24.04■■□□□ 1.44
RC3H2Q9HBD1 SH3RF3-AS1-201ENST00000567491 1604 ntBASIC24.04■■□□□ 1.44
RC3H2Q9HBD1 TMEM182-210ENST00000639249 1025 ntTSL 5 BASIC24.04■■□□□ 1.44
RC3H2Q9HBD1 SPHK1-210ENST00000592299 1821 ntAPPRIS P3 TSL 1 (best) BASIC24.04■■□□□ 1.44
RC3H2Q9HBD1 TBR1-202ENST00000410035 1454 ntTSL 2 BASIC24.04■■□□□ 1.44
RC3H2Q9HBD1 LMO2-201ENST00000257818 2294 ntTSL 1 (best) BASIC24.04■■□□□ 1.44
RC3H2Q9HBD1 TMEM121-201ENST00000392519 1532 ntAPPRIS P1 TSL 1 (best) BASIC24.04■■□□□ 1.44
RC3H2Q9HBD1 EI24-213ENST00000618552 1747 ntTSL 5 BASIC24.04■■□□□ 1.44
RC3H2Q9HBD1 GJD4-201ENST00000321660 1580 ntAPPRIS P1 TSL 1 (best) BASIC24.03■■□□□ 1.44
RC3H2Q9HBD1 HMGA2-205ENST00000425208 1444 ntTSL 1 (best) BASIC24.03■■□□□ 1.44
RC3H2Q9HBD1 STK19-201ENST00000375331 1663 ntAPPRIS ALT2 TSL 1 (best) BASIC24.03■■□□□ 1.44
RC3H2Q9HBD1 TPSG1-201ENST00000234798 1108 ntAPPRIS P1 TSL 1 (best) BASIC24.03■■□□□ 1.44
RC3H2Q9HBD1 YIF1B-202ENST00000337679 1257 ntTSL 1 (best) BASIC24.03■■□□□ 1.44
RC3H2Q9HBD1 AC068385.1-201ENST00000533218 409 ntTSL 3 BASIC24.03■■□□□ 1.44
RC3H2Q9HBD1 MLF2-206ENST00000539187 1110 ntAPPRIS P1 TSL 1 (best) BASIC24.03■■□□□ 1.44
RC3H2Q9HBD1 UQCR11-202ENST00000589880 504 ntAPPRIS P1 TSL 3 BASIC24.03■■□□□ 1.44
RC3H2Q9HBD1 AC022211.4-201ENST00000625094 2161 ntBASIC24.03■■□□□ 1.44
RC3H2Q9HBD1 UBALD1-208ENST00000591401 1305 ntTSL 5 BASIC24.03■■□□□ 1.44
RC3H2Q9HBD1 POU3F3-201ENST00000361360 3064 ntAPPRIS P1 BASIC24.02■■□□□ 1.44
RC3H2Q9HBD1 AP003733.4-201ENST00000623785 1697 ntBASIC24.02■■□□□ 1.44
RC3H2Q9HBD1 PURG-201ENST00000339382 2693 ntTSL 1 (best) BASIC24.02■■□□□ 1.44
RC3H2Q9HBD1 ACOT1-201ENST00000311148 1713 ntAPPRIS P1 TSL 1 (best) BASIC24.02■■□□□ 1.44
RC3H2Q9HBD1 C1QL2-201ENST00000272520 2043 ntAPPRIS P1 TSL 1 (best) BASIC24.02■■□□□ 1.44
RC3H2Q9HBD1 UCN-201ENST00000296099 795 ntAPPRIS P1 TSL 1 (best) BASIC24.02■■□□□ 1.44
RC3H2Q9HBD1 NFKBIB-201ENST00000313582 1159 ntAPPRIS P1 TSL 1 (best) BASIC24.02■■□□□ 1.44
Retrieved 100 of 98,524 protein–RNA pairs in 55.2 ms