Protein–RNA interactions for Protein: Q9H7J1

PPP1R3E, Protein phosphatase 1 regulatory subunit 3E, humanhuman

Predictions only

Length 279 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PPP1R3EQ9H7J1 UBE3C-209ENST00000611269 1866 ntTSL 2 BASIC19.73■□□□□ 0.75
PPP1R3EQ9H7J1 STMN4-204ENST00000519997 1623 ntTSL 2 BASIC19.73■□□□□ 0.75
PPP1R3EQ9H7J1 RUNDC3B-207ENST00000493037 2020 ntAPPRIS ALT2 TSL 1 (best) BASIC19.73■□□□□ 0.75
PPP1R3EQ9H7J1 ZYX-201ENST00000322764 2493 ntAPPRIS P2 TSL 1 (best) BASIC19.73■□□□□ 0.75
PPP1R3EQ9H7J1 CD63-202ENST00000420846 981 ntAPPRIS P1 TSL 5 BASIC19.73■□□□□ 0.75
PPP1R3EQ9H7J1 TMPO-AS1-201ENST00000546421 738 ntTSL 5 BASIC19.73■□□□□ 0.75
PPP1R3EQ9H7J1 SSX2IP-209ENST00000603677 1149 ntTSL 1 (best) BASIC19.73■□□□□ 0.75
PPP1R3EQ9H7J1 ZDHHC5-204ENST00000527985 2817 ntTSL 1 (best) BASIC19.73■□□□□ 0.75
PPP1R3EQ9H7J1 MSANTD3-207ENST00000622639 1748 ntAPPRIS P1 TSL 3 BASIC19.73■□□□□ 0.75
PPP1R3EQ9H7J1 HOXC8-201ENST00000040584 1889 ntAPPRIS P1 TSL 1 (best) BASIC19.73■□□□□ 0.75
PPP1R3EQ9H7J1 KLHDC9-203ENST00000392192 1333 ntTSL 1 (best) BASIC19.73■□□□□ 0.75
PPP1R3EQ9H7J1 CBLN3-201ENST00000267406 2346 ntAPPRIS P1 TSL 1 (best) BASIC19.73■□□□□ 0.75
PPP1R3EQ9H7J1 USF2-201ENST00000222305 1634 ntAPPRIS P1 TSL 1 (best) BASIC19.73■□□□□ 0.75
PPP1R3EQ9H7J1 DLL3-202ENST00000356433 2055 ntAPPRIS P1 TSL 2 BASIC19.72■□□□□ 0.75
PPP1R3EQ9H7J1 COMT-203ENST00000403184 2217 ntTSL 2 BASIC19.72■□□□□ 0.75
PPP1R3EQ9H7J1 PKIB-205ENST00000368452 1398 ntAPPRIS P1 TSL 1 (best) BASIC19.72■□□□□ 0.75
PPP1R3EQ9H7J1 AC131274.2-201ENST00000580697 1507 ntBASIC19.72■□□□□ 0.75
PPP1R3EQ9H7J1 GCA-201ENST00000233612 1694 ntTSL 2 BASIC19.72■□□□□ 0.75
PPP1R3EQ9H7J1 PDZRN4-202ENST00000402685 3347 ntAPPRIS P1 TSL 2 BASIC19.72■□□□□ 0.75
PPP1R3EQ9H7J1 ROGDI-201ENST00000322048 1735 ntAPPRIS P1 TSL 1 (best) BASIC19.72■□□□□ 0.75
PPP1R3EQ9H7J1 AQP1-202ENST00000409611 1140 ntTSL 1 (best) BASIC19.72■□□□□ 0.75
PPP1R3EQ9H7J1 CRACR2B-202ENST00000525077 1578 ntAPPRIS P1 TSL 1 (best) BASIC19.72■□□□□ 0.75
PPP1R3EQ9H7J1 MIR4508-201ENST00000584178 70 ntBASIC19.72■□□□□ 0.75
PPP1R3EQ9H7J1 UBE2J2-201ENST00000347370 2387 ntTSL 3 BASIC19.72■□□□□ 0.75
PPP1R3EQ9H7J1 TMEM165-201ENST00000381334 1928 ntAPPRIS P1 TSL 1 (best) BASIC19.72■□□□□ 0.75
PPP1R3EQ9H7J1 IRF3-227ENST00000600911 1637 ntTSL 5 BASIC19.72■□□□□ 0.75
PPP1R3EQ9H7J1 RNPEP-201ENST00000295640 2427 ntAPPRIS P1 TSL 1 (best) BASIC19.72■□□□□ 0.75
PPP1R3EQ9H7J1 ESRRAP2-201ENST00000418437 1549 ntBASIC19.71■□□□□ 0.75
PPP1R3EQ9H7J1 PLEKHA8-203ENST00000396259 2840 ntTSL 2 BASIC19.71■□□□□ 0.75
PPP1R3EQ9H7J1 OAF-201ENST00000328965 2525 ntAPPRIS P2 TSL 1 (best) BASIC19.71■□□□□ 0.75
PPP1R3EQ9H7J1 AF131216.4-201ENST00000638924 1588 ntBASIC19.71■□□□□ 0.75
PPP1R3EQ9H7J1 PNLIPRP2-205ENST00000611850 1407 ntTSL 5 BASIC19.71■□□□□ 0.75
PPP1R3EQ9H7J1 PRELID1-201ENST00000303204 1261 ntAPPRIS P1 TSL 1 (best) BASIC19.71■□□□□ 0.75
PPP1R3EQ9H7J1 KRT18P24-201ENST00000344739 1156 ntBASIC19.71■□□□□ 0.75
PPP1R3EQ9H7J1 QDPR-202ENST00000428702 1278 ntTSL 2 BASIC19.71■□□□□ 0.75
PPP1R3EQ9H7J1 AC103724.3-201ENST00000564481 992 ntBASIC19.71■□□□□ 0.75
PPP1R3EQ9H7J1 MIR4281-201ENST00000580852 62 ntBASIC19.71■□□□□ 0.75
PPP1R3EQ9H7J1 THA1P-201ENST00000590384 1145 ntBASIC19.71■□□□□ 0.75
PPP1R3EQ9H7J1 HMGA2-203ENST00000393578 1993 ntAPPRIS ALT1 TSL 1 (best) BASIC19.71■□□□□ 0.75
PPP1R3EQ9H7J1 MEF2A-207ENST00000558812 2186 ntTSL 2 BASIC19.71■□□□□ 0.75
PPP1R3EQ9H7J1 KIF12-207ENST00000640217 2194 ntAPPRIS P5 TSL 5 BASIC19.71■□□□□ 0.75
PPP1R3EQ9H7J1 SRI-201ENST00000265729 2010 ntAPPRIS P1 TSL 1 (best) BASIC19.71■□□□□ 0.75
PPP1R3EQ9H7J1 AC009126.1-201ENST00000501338 2245 ntTSL 2 BASIC19.71■□□□□ 0.75
PPP1R3EQ9H7J1 EI24-213ENST00000618552 1747 ntTSL 5 BASIC19.71■□□□□ 0.75
PPP1R3EQ9H7J1 CRIM1-201ENST00000280527 5912 ntAPPRIS P1 TSL 1 (best) BASIC19.7■□□□□ 0.74
PPP1R3EQ9H7J1 C14orf80-201ENST00000329886 1947 ntAPPRIS ALT2 TSL 1 (best) BASIC19.7■□□□□ 0.74
PPP1R3EQ9H7J1 DYRK1B-204ENST00000593685 2724 ntAPPRIS P3 TSL 5 BASIC19.7■□□□□ 0.74
PPP1R3EQ9H7J1 DOCK5-208ENST00000481100 2166 ntTSL 1 (best) BASIC19.7■□□□□ 0.74
PPP1R3EQ9H7J1 AC005906.2-202ENST00000638821 2168 ntTSL 5 BASIC19.7■□□□□ 0.74
PPP1R3EQ9H7J1 MESP1-201ENST00000300057 2369 ntAPPRIS P1 TSL 1 (best) BASIC19.7■□□□□ 0.74
PPP1R3EQ9H7J1 GBX1-201ENST00000297537 1092 ntAPPRIS P1 TSL 1 (best) BASIC19.7■□□□□ 0.74
PPP1R3EQ9H7J1 DRD2-202ENST00000362072 2789 ntAPPRIS P2 TSL 1 (best) BASIC19.7■□□□□ 0.74
PPP1R3EQ9H7J1 ASRGL1-201ENST00000301776 2182 ntAPPRIS P1 TSL 1 (best) BASIC19.7■□□□□ 0.74
PPP1R3EQ9H7J1 GPR161-203ENST00000367836 1983 ntTSL 2 BASIC19.7■□□□□ 0.74
PPP1R3EQ9H7J1 EFHD1-201ENST00000264059 2259 ntAPPRIS P1 TSL 1 (best) BASIC19.69■□□□□ 0.74
PPP1R3EQ9H7J1 DTNB-207ENST00000405222 2273 ntTSL 1 (best) BASIC19.69■□□□□ 0.74
PPP1R3EQ9H7J1 CPSF4-204ENST00000436336 1738 ntAPPRIS ALT1 TSL 1 (best) BASIC19.69■□□□□ 0.74
PPP1R3EQ9H7J1 COG8-201ENST00000562081 1731 ntAPPRIS P1 TSL 5 BASIC19.69■□□□□ 0.74
PPP1R3EQ9H7J1 MRPL23-202ENST00000381519 643 ntAPPRIS P1 TSL 3 BASIC19.69■□□□□ 0.74
PPP1R3EQ9H7J1 MRPL23-205ENST00000397298 736 ntAPPRIS P1 TSL 1 (best) BASIC19.69■□□□□ 0.74
PPP1R3EQ9H7J1 CDCA5-202ENST00000404147 1012 ntTSL 2 BASIC19.69■□□□□ 0.74
PPP1R3EQ9H7J1 AC009531.1-201ENST00000442323 580 ntTSL 4 BASIC19.69■□□□□ 0.74
PPP1R3EQ9H7J1 ILDR2-204ENST00000525740 2242 ntTSL 5 BASIC19.69■□□□□ 0.74
PPP1R3EQ9H7J1 CCDC92-209ENST00000545891 1790 ntAPPRIS P1 TSL 2 BASIC19.69■□□□□ 0.74
PPP1R3EQ9H7J1 GPSM1-204ENST00000429455 2057 ntTSL 3 BASIC19.69■□□□□ 0.74
PPP1R3EQ9H7J1 SP9-201ENST00000394967 2554 ntAPPRIS P1 TSL 5 BASIC19.69■□□□□ 0.74
PPP1R3EQ9H7J1 C2orf72-201ENST00000373640 3657 ntAPPRIS P1 TSL 2 BASIC19.69■□□□□ 0.74
PPP1R3EQ9H7J1 DUSP9-201ENST00000342782 2433 ntAPPRIS P1 TSL 1 (best) BASIC19.68■□□□□ 0.74
PPP1R3EQ9H7J1 CADPS-219ENST00000612439 5455 ntTSL 1 (best) BASIC19.68■□□□□ 0.74
PPP1R3EQ9H7J1 COL23A1-201ENST00000390654 3061 ntAPPRIS P2 TSL 5 BASIC19.68■□□□□ 0.74
PPP1R3EQ9H7J1 EML2-201ENST00000245925 2264 ntAPPRIS P3 TSL 1 (best) BASIC19.68■□□□□ 0.74
PPP1R3EQ9H7J1 CCDC24-201ENST00000372318 1463 ntAPPRIS P2 TSL 1 (best) BASIC19.68■□□□□ 0.74
PPP1R3EQ9H7J1 CD63-201ENST00000257857 1070 ntAPPRIS P1 TSL 1 (best) BASIC19.68■□□□□ 0.74
PPP1R3EQ9H7J1 PHF7-201ENST00000327906 2130 ntAPPRIS P1 TSL 1 (best) BASIC19.68■□□□□ 0.74
PPP1R3EQ9H7J1 CDKN2A-214ENST00000579755 1283 ntAPPRIS P1 TSL 1 (best) BASIC19.68■□□□□ 0.74
PPP1R3EQ9H7J1 AL590094.1-201ENST00000635581 706 ntTSL 2 BASIC19.68■□□□□ 0.74
PPP1R3EQ9H7J1 PFKFB4-204ENST00000416568 1575 ntTSL 1 (best) BASIC19.68■□□□□ 0.74
PPP1R3EQ9H7J1 PNCK-215ENST00000447676 1585 ntTSL 2 BASIC19.68■□□□□ 0.74
PPP1R3EQ9H7J1 CD37-213ENST00000598095 1598 ntTSL 2 BASIC19.68■□□□□ 0.74
PPP1R3EQ9H7J1 EFS-202ENST00000351354 2704 ntTSL 1 (best) BASIC19.68■□□□□ 0.74
PPP1R3EQ9H7J1 NR0B1-202ENST00000378970 2021 ntAPPRIS P1 TSL 1 (best) BASIC19.68■□□□□ 0.74
PPP1R3EQ9H7J1 MAG-202ENST00000392213 2390 ntAPPRIS P4 TSL 1 (best) BASIC19.68■□□□□ 0.74
PPP1R3EQ9H7J1 IER2-201ENST00000292433 2085 ntAPPRIS P1 TSL 1 (best) BASIC19.67■□□□□ 0.74
PPP1R3EQ9H7J1 OLFM1-204ENST00000371793 2444 ntAPPRIS P1 TSL 3 BASIC19.67■□□□□ 0.74
PPP1R3EQ9H7J1 MVD-201ENST00000301012 1823 ntAPPRIS P1 TSL 1 (best) BASIC19.67■□□□□ 0.74
PPP1R3EQ9H7J1 ADAD2-201ENST00000268624 2283 ntAPPRIS P3 TSL 2 BASIC19.67■□□□□ 0.74
PPP1R3EQ9H7J1 EPM2A-202ENST00000435470 1278 ntTSL 1 (best) BASIC19.67■□□□□ 0.74
PPP1R3EQ9H7J1 AC064853.4-201ENST00000641394 363 ntAPPRIS P1 BASIC19.67■□□□□ 0.74
PPP1R3EQ9H7J1 NPAS3-201ENST00000346562 5847 ntAPPRIS P3 TSL 1 (best) BASIC19.67■□□□□ 0.74
PPP1R3EQ9H7J1 DMPK-220ENST00000618091 2503 ntTSL 1 (best) BASIC19.67■□□□□ 0.74
PPP1R3EQ9H7J1 H19-210ENST00000439725 1929 ntTSL 2 BASIC19.66■□□□□ 0.74
PPP1R3EQ9H7J1 TRIM54-202ENST00000380075 1967 ntAPPRIS P1 TSL 1 (best) BASIC19.66■□□□□ 0.74
PPP1R3EQ9H7J1 C7orf25-201ENST00000350427 2451 ntAPPRIS P1 TSL 2 BASIC19.66■□□□□ 0.74
PPP1R3EQ9H7J1 SNRNP70-206ENST00000598441 1574 ntAPPRIS P1 TSL 1 (best) BASIC19.66■□□□□ 0.74
PPP1R3EQ9H7J1 DHRS11-215ENST00000618403 1598 ntAPPRIS P1 TSL 1 (best) BASIC19.66■□□□□ 0.74
PPP1R3EQ9H7J1 ZIM2-201ENST00000593711 2083 ntAPPRIS P1 TSL 1 (best) BASIC19.66■□□□□ 0.74
PPP1R3EQ9H7J1 CACNG6-203ENST00000352529 1635 ntTSL 5 BASIC19.66■□□□□ 0.74
PPP1R3EQ9H7J1 LIMS2-201ENST00000324938 2111 ntAPPRIS P3 TSL 1 (best) BASIC19.66■□□□□ 0.74
PPP1R3EQ9H7J1 MPST-202ENST00000397225 2116 ntAPPRIS P1 TSL 2 BASIC19.66■□□□□ 0.74
PPP1R3EQ9H7J1 AC012123.1-201ENST00000426194 1661 ntTSL 5 BASIC19.66■□□□□ 0.74
Retrieved 100 of 98,524 protein–RNA pairs in 78.5 ms