Protein–RNA interactions for Protein: Q9H161

ALX4, Homeobox protein aristaless-like 4, humanhuman

Predicted RBP Predictions only

Length 411 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ALX4Q9H161 PBX4-201ENST00000251203 1724 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
ALX4Q9H161 TMEM120A-214ENST00000493111 1456 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
ALX4Q9H161 AP005233.1-201ENST00000562341 2424 ntTSL 2 BASIC18.82■□□□□ 0.6
ALX4Q9H161 PLD4-201ENST00000392593 6515 ntAPPRIS P3 TSL 1 (best) BASIC18.82■□□□□ 0.6
ALX4Q9H161 DMPK-220ENST00000618091 2503 ntTSL 1 (best) BASIC18.81■□□□□ 0.6
ALX4Q9H161 FBXL19-205ENST00000562319 2462 ntAPPRIS ALT2 TSL 2 BASIC18.81■□□□□ 0.6
ALX4Q9H161 OLFM1-204ENST00000371793 2444 ntAPPRIS P1 TSL 3 BASIC18.81■□□□□ 0.6
ALX4Q9H161 DCAF4-206ENST00000509153 1521 ntAPPRIS ALT2 TSL 2 BASIC18.81■□□□□ 0.6
ALX4Q9H161 IGSF21-201ENST00000251296 1943 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
ALX4Q9H161 AL121603.2-201ENST00000557373 2117 ntBASIC18.81■□□□□ 0.6
ALX4Q9H161 AL033527.3-201ENST00000566366 1196 ntBASIC18.81■□□□□ 0.6
ALX4Q9H161 SPINT2-201ENST00000301244 1802 ntAPPRIS P2 TSL 1 (best) BASIC18.81■□□□□ 0.6
ALX4Q9H161 PABPC1L2B-201ENST00000373521 2197 ntAPPRIS P1 BASIC18.81■□□□□ 0.6
ALX4Q9H161 TFG-201ENST00000240851 1978 ntAPPRIS P3 TSL 1 (best) BASIC18.81■□□□□ 0.6
ALX4Q9H161 PTDSS2-201ENST00000308020 2445 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
ALX4Q9H161 IRF3-201ENST00000309877 1691 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
ALX4Q9H161 CREB1-205ENST00000430624 2005 ntAPPRIS P1 TSL 5 BASIC18.8■□□□□ 0.6
ALX4Q9H161 AC026310.3-201ENST00000625186 2373 ntBASIC18.8■□□□□ 0.6
ALX4Q9H161 GNAS-AS1_1.1-201ENST00000621898 103 ntBASIC18.8■□□□□ 0.6
ALX4Q9H161 AC129492.7-201ENST00000622992 756 ntBASIC18.8■□□□□ 0.6
ALX4Q9H161 TMEM260-202ENST00000538838 1638 ntTSL 1 (best) BASIC18.8■□□□□ 0.6
ALX4Q9H161 IQCJ-SCHIP1-203ENST00000476809 1780 ntAPPRIS ALT2 TSL 5 BASIC18.8■□□□□ 0.6
ALX4Q9H161 TRIM28-201ENST00000253024 2960 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
ALX4Q9H161 SLC25A47-202ENST00000557052 1552 ntTSL 1 (best) BASIC18.8■□□□□ 0.6
ALX4Q9H161 PALM-208ENST00000592155 2272 ntTSL 4 BASIC18.8■□□□□ 0.6
ALX4Q9H161 GABBR2-201ENST00000259455 5788 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
ALX4Q9H161 RAB20-201ENST00000267328 1518 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
ALX4Q9H161 UBA5-211ENST00000493720 2058 ntTSL 5 BASIC18.79■□□□□ 0.6
ALX4Q9H161 AC004987.1-201ENST00000428627 508 ntBASIC18.79■□□□□ 0.6
ALX4Q9H161 HOMER3-207ENST00000594794 903 ntTSL 5 BASIC18.79■□□□□ 0.6
ALX4Q9H161 BX005266.2-202ENST00000446626 2245 ntTSL 1 (best) BASIC18.79■□□□□ 0.6
ALX4Q9H161 EIF5A-211ENST00000576930 1439 ntAPPRIS P1 TSL 5 BASIC18.79■□□□□ 0.6
ALX4Q9H161 PPP3CC-201ENST00000240139 2189 ntAPPRIS P3 TSL 1 (best) BASIC18.79■□□□□ 0.6
ALX4Q9H161 B3GAT3-201ENST00000265471 1641 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
ALX4Q9H161 DCAF4-202ENST00000358377 2024 ntAPPRIS P4 TSL 1 (best) BASIC18.78■□□□□ 0.6
ALX4Q9H161 RABL6-204ENST00000371671 1580 ntAPPRIS ALT2 TSL 1 (best) BASIC18.78■□□□□ 0.6
ALX4Q9H161 RAD9A-201ENST00000307980 2119 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
ALX4Q9H161 ZSCAN1-202ENST00000391700 952 ntTSL 1 (best) BASIC18.78■□□□□ 0.6
ALX4Q9H161 KMT2E-AS1-201ENST00000453677 736 ntTSL 3 BASIC18.78■□□□□ 0.6
ALX4Q9H161 SPCS2P3-201ENST00000500401 656 ntBASIC18.78■□□□□ 0.6
ALX4Q9H161 DUX4L18-201ENST00000553347 1267 ntBASIC18.78■□□□□ 0.6
ALX4Q9H161 UBE2I-213ENST00000566587 1098 ntAPPRIS P1 TSL 2 BASIC18.78■□□□□ 0.6
ALX4Q9H161 RNF149-201ENST00000295317 2458 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
ALX4Q9H161 RNASET2-210ENST00000508775 1375 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
ALX4Q9H161 TTLL1-201ENST00000266254 1645 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
ALX4Q9H161 ZDHHC16-203ENST00000353979 1647 ntTSL 1 (best) BASIC18.78■□□□□ 0.6
ALX4Q9H161 ST7L-201ENST00000343210 1866 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.6
ALX4Q9H161 ST3GAL5-231ENST00000639119 2131 ntTSL 5 BASIC18.77■□□□□ 0.6
ALX4Q9H161 KLF9-201ENST00000377126 5175 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.6
ALX4Q9H161 PKD1P6-201ENST00000343738 4769 ntBASIC18.77■□□□□ 0.6
ALX4Q9H161 HNRNPD-203ENST00000353341 1585 ntAPPRIS ALT1 TSL 1 (best) BASIC18.77■□□□□ 0.6
ALX4Q9H161 DYRK3-202ENST00000367108 2218 ntTSL 1 (best) BASIC18.77■□□□□ 0.6
ALX4Q9H161 KCNT1-201ENST00000263604 5245 ntAPPRIS ALT2 TSL 5 BASIC18.77■□□□□ 0.6
ALX4Q9H161 SLC12A2-201ENST00000262461 6885 ntAPPRIS P3 TSL 1 (best) BASIC18.77■□□□□ 0.6
ALX4Q9H161 RBFA-201ENST00000262197 1219 ntTSL 1 (best) BASIC18.77■□□□□ 0.6
ALX4Q9H161 PPP1R14A-201ENST00000301242 777 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.6
ALX4Q9H161 RIPPLY2-202ENST00000369689 664 ntAPPRIS P2 TSL 1 (best) BASIC18.77■□□□□ 0.6
ALX4Q9H161 ARHGEF4-202ENST00000355771 1872 ntAPPRIS ALT2 TSL 1 (best) BASIC18.77■□□□□ 0.6
ALX4Q9H161 AKT2-210ENST00000424901 5170 ntTSL 5 BASIC18.77■□□□□ 0.59
ALX4Q9H161 WRAP73-201ENST00000270708 1665 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
ALX4Q9H161 RITA1-202ENST00000549621 2041 ntAPPRIS P1 TSL 2 BASIC18.76■□□□□ 0.59
ALX4Q9H161 CTCF-202ENST00000401394 2978 ntTSL 1 (best) BASIC18.76■□□□□ 0.59
ALX4Q9H161 EFS-202ENST00000351354 2704 ntTSL 1 (best) BASIC18.76■□□□□ 0.59
ALX4Q9H161 CNEP1R1-202ENST00000427478 2117 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
ALX4Q9H161 SH3D19-211ENST00000604030 5228 ntTSL 5 BASIC18.76■□□□□ 0.59
ALX4Q9H161 GGH-201ENST00000260118 1607 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
ALX4Q9H161 PDSS1-201ENST00000376215 1626 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
ALX4Q9H161 C14orf80-204ENST00000392522 1630 ntAPPRIS P4 TSL 5 BASIC18.76■□□□□ 0.59
ALX4Q9H161 CD63-202ENST00000420846 981 ntAPPRIS P1 TSL 5 BASIC18.76■□□□□ 0.59
ALX4Q9H161 ATP5G2P3-201ENST00000429083 425 ntBASIC18.76■□□□□ 0.59
ALX4Q9H161 DUX4L9-201ENST00000449051 1259 ntBASIC18.76■□□□□ 0.59
ALX4Q9H161 SLC35F4-206ENST00000556826 1908 ntAPPRIS P1 TSL 5 BASIC18.76■□□□□ 0.59
ALX4Q9H161 GNA11-201ENST00000078429 4147 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
ALX4Q9H161 VPS9D1-AS1-202ENST00000562866 1753 ntTSL 2 BASIC18.76■□□□□ 0.59
ALX4Q9H161 NRL-202ENST00000396997 1517 ntAPPRIS P1 TSL 1 (best) BASIC18.75■□□□□ 0.59
ALX4Q9H161 PARD3-213ENST00000545260 5740 ntAPPRIS ALT2 TSL 1 (best) BASIC18.75■□□□□ 0.59
ALX4Q9H161 ZDHHC8P1-201ENST00000255890 2382 ntTSL 2 BASIC18.75■□□□□ 0.59
ALX4Q9H161 SYT6-209ENST00000610222 1707 ntAPPRIS P1 TSL 5 BASIC18.75■□□□□ 0.59
ALX4Q9H161 PXK-202ENST00000356151 2037 ntAPPRIS P1 TSL 1 (best) BASIC18.75■□□□□ 0.59
ALX4Q9H161 PAQR6-202ENST00000335852 2117 ntTSL 2 BASIC18.75■□□□□ 0.59
ALX4Q9H161 TSPY4-202ENST00000426950 1179 ntAPPRIS P5 TSL 5 BASIC18.75■□□□□ 0.59
ALX4Q9H161 COL23A1-201ENST00000390654 3061 ntAPPRIS P2 TSL 5 BASIC18.75■□□□□ 0.59
ALX4Q9H161 FAM19A5-202ENST00000358295 2638 ntAPPRIS P1 TSL 2 BASIC18.75■□□□□ 0.59
ALX4Q9H161 PNRC1-201ENST00000336032 2065 ntAPPRIS P1 TSL 1 (best) BASIC18.75■□□□□ 0.59
ALX4Q9H161 ZNF707-201ENST00000358656 2183 ntAPPRIS P1 TSL 2 BASIC18.75■□□□□ 0.59
ALX4Q9H161 LOXL1-AS1-210ENST00000567257 2358 ntTSL 2 BASIC18.75■□□□□ 0.59
ALX4Q9H161 WTAP-207ENST00000631126 1430 ntTSL 3 BASIC18.74■□□□□ 0.59
ALX4Q9H161 STIM2-204ENST00000467087 5154 ntAPPRIS ALT2 TSL 1 (best) BASIC18.74■□□□□ 0.59
ALX4Q9H161 AC090877.2-201ENST00000558441 1738 ntBASIC18.74■□□□□ 0.59
ALX4Q9H161 ZXDC-201ENST00000336332 2579 ntAPPRIS ALT2 TSL 1 (best) BASIC18.74■□□□□ 0.59
ALX4Q9H161 P4HTM-201ENST00000343546 2268 ntTSL 1 (best) BASIC18.74■□□□□ 0.59
ALX4Q9H161 NIPSNAP2-205ENST00000446778 1882 ntTSL 2 BASIC18.74■□□□□ 0.59
ALX4Q9H161 CCDC157-202ENST00000399824 1759 ntAPPRIS ALT2 TSL 1 (best) BASIC18.74■□□□□ 0.59
ALX4Q9H161 NTHL1-201ENST00000219066 1067 ntAPPRIS P1 TSL 1 (best) BASIC18.74■□□□□ 0.59
ALX4Q9H161 TSPY13P-201ENST00000338964 914 ntBASIC18.74■□□□□ 0.59
ALX4Q9H161 RAB4B-203ENST00000594800 1173 ntAPPRIS P1 TSL 5 BASIC18.74■□□□□ 0.59
ALX4Q9H161 UBE2E3-213ENST00000602959 909 ntAPPRIS P1 TSL 5 BASIC18.74■□□□□ 0.59
ALX4Q9H161 HNRNPUL1-221ENST00000617305 1018 ntTSL 1 (best) BASIC18.74■□□□□ 0.59
ALX4Q9H161 DGKQ-201ENST00000273814 4636 ntAPPRIS P2 TSL 1 (best) BASIC18.74■□□□□ 0.59
ALX4Q9H161 TEX22-201ENST00000451127 2571 ntAPPRIS P1 TSL 2 BASIC18.74■□□□□ 0.59
Retrieved 100 of 98,524 protein–RNA pairs in 71.7 ms