Protein–RNA interactions for Protein: Q9H0S4

DDX47, Probable ATP-dependent RNA helicase DDX47, humanhuman

Known RBP Predictions only

Length 455 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
DDX47Q9H0S4 TEAD1-206ENST00000527636 2544 ntAPPRIS ALT2 TSL 1 (best) BASIC23.25■■□□□ 1.31
DDX47Q9H0S4 CCDC38-201ENST00000344280 2277 ntAPPRIS P2 TSL 1 (best) BASIC23.25■■□□□ 1.31
DDX47Q9H0S4 SDHAF1-201ENST00000378887 1117 ntAPPRIS P1 BASIC23.25■■□□□ 1.31
DDX47Q9H0S4 HYI-210ENST00000486909 905 ntTSL 5 BASIC23.25■■□□□ 1.31
DDX47Q9H0S4 ZNF568-208ENST00000586353 1902 ntTSL 1 (best) BASIC23.25■■□□□ 1.31
DDX47Q9H0S4 HOMER1-202ENST00000334082 5881 ntAPPRIS P1 TSL 1 (best) BASIC23.25■■□□□ 1.31
DDX47Q9H0S4 WRAP73-201ENST00000270708 1665 ntAPPRIS P1 TSL 1 (best) BASIC23.25■■□□□ 1.31
DDX47Q9H0S4 AC064853.3-201ENST00000641801 1658 ntAPPRIS P1 BASIC23.25■■□□□ 1.31
DDX47Q9H0S4 BX088645.1-201ENST00000636699 1728 ntAPPRIS P1 TSL 5 BASIC23.25■■□□□ 1.31
DDX47Q9H0S4 ITPKC-201ENST00000263370 3385 ntAPPRIS P1 TSL 1 (best) BASIC23.24■■□□□ 1.31
DDX47Q9H0S4 IRX2-201ENST00000302057 2456 ntAPPRIS P1 TSL 1 (best) BASIC23.24■■□□□ 1.31
DDX47Q9H0S4 GPRC5B-210ENST00000569847 1830 ntAPPRIS P2 TSL 2 BASIC23.24■■□□□ 1.31
DDX47Q9H0S4 PSPH-202ENST00000395471 2178 ntAPPRIS P1 TSL 1 (best) BASIC23.24■■□□□ 1.31
DDX47Q9H0S4 SRP68-201ENST00000307877 2649 ntAPPRIS P1 TSL 1 (best) BASIC23.24■■□□□ 1.31
DDX47Q9H0S4 AF131216.4-201ENST00000638924 1588 ntBASIC23.24■■□□□ 1.31
DDX47Q9H0S4 SRPK3-202ENST00000370101 1958 ntAPPRIS P3 TSL 1 (best) BASIC23.24■■□□□ 1.31
DDX47Q9H0S4 AC139795.1-203ENST00000515045 853 ntTSL 2 BASIC23.24■■□□□ 1.31
DDX47Q9H0S4 AC022616.5-201ENST00000518796 181 ntBASIC23.24■■□□□ 1.31
DDX47Q9H0S4 AC019171.1-201ENST00000601251 1056 ntBASIC23.24■■□□□ 1.31
DDX47Q9H0S4 PTPRF-216ENST00000617451 1129 ntTSL 5 BASIC23.24■■□□□ 1.31
DDX47Q9H0S4 TGIF1-206ENST00000405385 1689 ntTSL 2 BASIC23.24■■□□□ 1.31
DDX47Q9H0S4 TMEM165-201ENST00000381334 1928 ntAPPRIS P1 TSL 1 (best) BASIC23.23■■□□□ 1.31
DDX47Q9H0S4 CNEP1R1-202ENST00000427478 2117 ntAPPRIS P1 TSL 1 (best) BASIC23.23■■□□□ 1.31
DDX47Q9H0S4 DCTD-201ENST00000357067 1931 ntTSL 1 (best) BASIC23.23■■□□□ 1.31
DDX47Q9H0S4 FNTA-208ENST00000529687 1950 ntTSL 2 BASIC23.23■■□□□ 1.31
DDX47Q9H0S4 SLC12A5-AS1-202ENST00000535913 1957 ntTSL 2 BASIC23.23■■□□□ 1.31
DDX47Q9H0S4 SLC19A1-209ENST00000485649 1896 ntAPPRIS ALT2 TSL 2 BASIC23.22■■□□□ 1.31
DDX47Q9H0S4 TLX2-201ENST00000233638 2136 ntAPPRIS P1 TSL 1 (best) BASIC23.22■■□□□ 1.31
DDX47Q9H0S4 TRIM52-AS1-202ENST00000507434 672 ntTSL 1 (best) BASIC23.22■■□□□ 1.31
DDX47Q9H0S4 AC120024.1-201ENST00000562672 995 ntBASIC23.22■■□□□ 1.31
DDX47Q9H0S4 ARL13B-205ENST00000471138 2206 ntAPPRIS P1 TSL 1 (best) BASIC23.22■■□□□ 1.31
DDX47Q9H0S4 BRSK2-212ENST00000531197 3163 ntAPPRIS ALT2 TSL 1 (best) BASIC23.22■■□□□ 1.31
DDX47Q9H0S4 P4HTM-201ENST00000343546 2268 ntTSL 1 (best) BASIC23.22■■□□□ 1.31
DDX47Q9H0S4 TMEM25-205ENST00000411589 2442 ntAPPRIS ALT2 TSL 2 BASIC23.22■■□□□ 1.31
DDX47Q9H0S4 IKBKG-211ENST00000615874 1460 ntTSL 5 BASIC23.22■■□□□ 1.31
DDX47Q9H0S4 IKBKG-215ENST00000619941 1463 ntTSL 5 BASIC23.22■■□□□ 1.31
DDX47Q9H0S4 SLC25A27-202ENST00000411689 2526 ntTSL 1 (best) BASIC23.22■■□□□ 1.31
DDX47Q9H0S4 PTOV1-220ENST00000601675 1587 ntAPPRIS P1 TSL 1 (best) BASIC23.22■■□□□ 1.31
DDX47Q9H0S4 ST3GAL4-202ENST00000356132 1745 ntTSL 5 BASIC23.22■■□□□ 1.31
DDX47Q9H0S4 RASSF5-202ENST00000579436 2064 ntAPPRIS P1 TSL 1 (best) BASIC23.21■■□□□ 1.31
DDX47Q9H0S4 CTGF-201ENST00000367976 2339 ntAPPRIS P1 TSL 1 (best) BASIC23.21■■□□□ 1.31
DDX47Q9H0S4 AL137060.1-201ENST00000618151 2648 ntBASIC23.21■■□□□ 1.31
DDX47Q9H0S4 C5orf38-202ENST00000397835 681 ntAPPRIS ALT2 TSL 5 BASIC23.21■■□□□ 1.31
DDX47Q9H0S4 AC009531.1-201ENST00000442323 580 ntTSL 4 BASIC23.21■■□□□ 1.31
DDX47Q9H0S4 USF2-207ENST00000595068 1612 ntTSL 5 BASIC23.21■■□□□ 1.31
DDX47Q9H0S4 ST7L-201ENST00000343210 1866 ntAPPRIS P1 TSL 1 (best) BASIC23.21■■□□□ 1.31
DDX47Q9H0S4 CXCL14-201ENST00000337225 1971 ntAPPRIS P2 TSL 1 (best) BASIC23.21■■□□□ 1.31
DDX47Q9H0S4 RANBP10-202ENST00000448631 2232 ntTSL 2 BASIC23.21■■□□□ 1.31
DDX47Q9H0S4 BAALC-205ENST00000438105 2662 ntTSL 1 (best) BASIC23.2■■□□□ 1.3
DDX47Q9H0S4 CBLN3-201ENST00000267406 2346 ntAPPRIS P1 TSL 1 (best) BASIC23.2■■□□□ 1.3
DDX47Q9H0S4 AC080038.3-201ENST00000623346 1952 ntBASIC23.2■■□□□ 1.3
DDX47Q9H0S4 HNRNPD-202ENST00000352301 1667 ntAPPRIS ALT1 TSL 1 (best) BASIC23.2■■□□□ 1.3
DDX47Q9H0S4 TMEM171-202ENST00000454765 1535 ntAPPRIS P3 TSL 1 (best) BASIC23.2■■□□□ 1.3
DDX47Q9H0S4 R3HCC1-202ENST00000411463 1467 ntAPPRIS P5 TSL 5 BASIC23.2■■□□□ 1.3
DDX47Q9H0S4 AL136090.1-201ENST00000446849 366 ntTSL 3 BASIC23.2■■□□□ 1.3
DDX47Q9H0S4 GUCD1-207ENST00000447813 895 ntTSL 3 BASIC23.2■■□□□ 1.3
DDX47Q9H0S4 DTNB-207ENST00000405222 2273 ntTSL 1 (best) BASIC23.2■■□□□ 1.3
DDX47Q9H0S4 VAV3-202ENST00000370056 4990 ntAPPRIS P1 TSL 1 (best) BASIC23.2■■□□□ 1.3
DDX47Q9H0S4 CDKN1C-202ENST00000414822 2051 ntAPPRIS P3 TSL 1 (best) BASIC23.2■■□□□ 1.3
DDX47Q9H0S4 ADD1-202ENST00000355842 4743 ntTSL 1 (best) BASIC23.2■■□□□ 1.3
DDX47Q9H0S4 RITA1-202ENST00000549621 2041 ntAPPRIS P1 TSL 2 BASIC23.2■■□□□ 1.3
DDX47Q9H0S4 SLC12A2-201ENST00000262461 6885 ntAPPRIS P3 TSL 1 (best) BASIC23.19■■□□□ 1.3
DDX47Q9H0S4 AC092053.2-201ENST00000640557 1818 ntBASIC23.19■■□□□ 1.3
DDX47Q9H0S4 PTP4A3-204ENST00000521578 1717 ntAPPRIS P1 TSL 5 BASIC23.19■■□□□ 1.3
DDX47Q9H0S4 SERPINB5-201ENST00000382771 2783 ntAPPRIS P1 TSL 1 (best) BASIC23.19■■□□□ 1.3
DDX47Q9H0S4 MANEAL-203ENST00000397631 2327 ntTSL 1 (best) BASIC23.19■■□□□ 1.3
DDX47Q9H0S4 STEAP2-207ENST00000402625 1372 ntTSL 5 BASIC23.19■■□□□ 1.3
DDX47Q9H0S4 MPST-202ENST00000397225 2116 ntAPPRIS P1 TSL 2 BASIC23.19■■□□□ 1.3
DDX47Q9H0S4 AL121899.1-202ENST00000411839 536 ntTSL 5 BASIC23.19■■□□□ 1.3
DDX47Q9H0S4 AL590677.1-201ENST00000438431 380 ntTSL 5 BASIC23.19■■□□□ 1.3
DDX47Q9H0S4 MTX2-204ENST00000443241 799 ntTSL 3 BASIC23.19■■□□□ 1.3
DDX47Q9H0S4 AC092807.3-205ENST00000467666 531 ntTSL 3 BASIC23.19■■□□□ 1.3
DDX47Q9H0S4 AC139795.1-202ENST00000500444 432 ntBASIC23.19■■□□□ 1.3
DDX47Q9H0S4 EPHA10-211ENST00000540011 720 ntTSL 5 BASIC23.19■■□□□ 1.3
DDX47Q9H0S4 DUX4L18-201ENST00000553347 1267 ntBASIC23.19■■□□□ 1.3
DDX47Q9H0S4 NRL-203ENST00000397002 1976 ntAPPRIS P1 TSL 1 (best) BASIC23.19■■□□□ 1.3
DDX47Q9H0S4 FAM19A5-202ENST00000358295 2638 ntAPPRIS P1 TSL 2 BASIC23.19■■□□□ 1.3
DDX47Q9H0S4 LSM14B-201ENST00000279068 2548 ntAPPRIS P1 TSL 5 BASIC23.19■■□□□ 1.3
DDX47Q9H0S4 RDX-204ENST00000528498 2511 ntTSL 1 (best) BASIC23.19■■□□□ 1.3
DDX47Q9H0S4 GAS2L1-207ENST00000611648 2482 ntAPPRIS P1 TSL 2 BASIC23.19■■□□□ 1.3
DDX47Q9H0S4 ARIH2OS-201ENST00000408959 1598 ntAPPRIS P1 BASIC23.18■■□□□ 1.3
DDX47Q9H0S4 PLPP5-203ENST00000424479 2130 ntAPPRIS P1 TSL 1 (best) BASIC23.18■■□□□ 1.3
DDX47Q9H0S4 HSD11B1L-217ENST00000581521 1884 ntAPPRIS P3 TSL 5 BASIC23.18■■□□□ 1.3
DDX47Q9H0S4 AKT1S1-206ENST00000391834 1849 ntAPPRIS P1 TSL 5 BASIC23.18■■□□□ 1.3
DDX47Q9H0S4 C11orf96-202ENST00000528572 1834 ntBASIC23.18■■□□□ 1.3
DDX47Q9H0S4 CLIC3-203ENST00000494426 1017 ntAPPRIS P1 TSL 1 (best) BASIC23.18■■□□□ 1.3
DDX47Q9H0S4 FAM66C-208ENST00000541558 2087 ntTSL 2 BASIC23.18■■□□□ 1.3
DDX47Q9H0S4 DNAJC25-201ENST00000313525 2268 ntAPPRIS P1 TSL 1 (best) BASIC23.17■■□□□ 1.3
DDX47Q9H0S4 PHF11-202ENST00000378319 1359 ntAPPRIS P3 TSL 1 (best) BASIC23.17■■□□□ 1.3
DDX47Q9H0S4 LY6H-201ENST00000342752 951 ntAPPRIS ALT2 TSL 1 (best) BASIC23.17■■□□□ 1.3
DDX47Q9H0S4 NOX4-204ENST00000393282 560 ntTSL 1 (best) BASIC23.17■■□□□ 1.3
DDX47Q9H0S4 LY6H-202ENST00000414417 1056 ntAPPRIS ALT2 TSL 1 (best) BASIC23.17■■□□□ 1.3
DDX47Q9H0S4 LY6H-203ENST00000430474 925 ntAPPRIS P3 TSL 3 BASIC23.17■■□□□ 1.3
DDX47Q9H0S4 HOMER3-207ENST00000594794 903 ntTSL 5 BASIC23.17■■□□□ 1.3
DDX47Q9H0S4 AC005551.1-201ENST00000641816 493 ntAPPRIS P1 BASIC23.17■■□□□ 1.3
DDX47Q9H0S4 AL117348.2-201ENST00000432920 1625 ntAPPRIS P1 TSL 2 BASIC23.17■■□□□ 1.3
DDX47Q9H0S4 FOXO1-201ENST00000379561 5735 ntAPPRIS P1 TSL 1 (best) BASIC23.17■■□□□ 1.3
DDX47Q9H0S4 RNPEP-201ENST00000295640 2427 ntAPPRIS P1 TSL 1 (best) BASIC23.17■■□□□ 1.3
DDX47Q9H0S4 ICAM5-201ENST00000221980 3000 ntAPPRIS P1 TSL 1 (best) BASIC23.17■■□□□ 1.3
DDX47Q9H0S4 GRK4-201ENST00000345167 2013 ntTSL 1 (best) BASIC23.16■■□□□ 1.3
Retrieved 100 of 98,524 protein–RNA pairs in 50.6 ms