Protein–RNA interactions for Protein: Q9BQ75

CMSS1, Protein CMSS1, humanhuman

Known RBP Predictions only

Length 279 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CMSS1Q9BQ75 LINC00526-201ENST00000581067 1875 ntBASIC18.96■□□□□ 0.63
CMSS1Q9BQ75 NMI-201ENST00000243346 1623 ntAPPRIS P1 TSL 1 (best) BASIC18.96■□□□□ 0.63
CMSS1Q9BQ75 TTC34-202ENST00000637179 1775 ntAPPRIS P2 TSL 5 BASIC18.96■□□□□ 0.63
CMSS1Q9BQ75 YY1AP1-212ENST00000404643 2654 ntAPPRIS ALT2 TSL 1 (best) BASIC18.96■□□□□ 0.63
CMSS1Q9BQ75 METTL9-202ENST00000396014 1817 ntAPPRIS ALT1 TSL 1 (best) BASIC18.95■□□□□ 0.62
CMSS1Q9BQ75 ASB6-201ENST00000277458 2330 ntAPPRIS P1 TSL 1 (best) BASIC18.95■□□□□ 0.62
CMSS1Q9BQ75 TRIP13-201ENST00000166345 2672 ntAPPRIS P1 TSL 1 (best) BASIC18.95■□□□□ 0.62
CMSS1Q9BQ75 MESP1-201ENST00000300057 2369 ntAPPRIS P1 TSL 1 (best) BASIC18.95■□□□□ 0.62
CMSS1Q9BQ75 COMT-203ENST00000403184 2217 ntTSL 2 BASIC18.95■□□□□ 0.62
CMSS1Q9BQ75 CST6-201ENST00000312134 759 ntAPPRIS P1 TSL 1 (best) BASIC18.95■□□□□ 0.62
CMSS1Q9BQ75 CDKN2A-214ENST00000579755 1283 ntAPPRIS P1 TSL 1 (best) BASIC18.95■□□□□ 0.62
CMSS1Q9BQ75 ING1-201ENST00000333219 5119 ntAPPRIS P1 TSL 1 (best) BASIC18.95■□□□□ 0.62
CMSS1Q9BQ75 FAIM-201ENST00000338446 1622 ntTSL 5 BASIC18.95■□□□□ 0.62
CMSS1Q9BQ75 ST3GAL5-222ENST00000638572 4431 ntAPPRIS P2 TSL 1 (best) BASIC18.94■□□□□ 0.62
CMSS1Q9BQ75 REEP5-202ENST00000379638 3326 ntAPPRIS P1 TSL 1 (best) BASIC18.94■□□□□ 0.62
CMSS1Q9BQ75 DISC1-220ENST00000602873 1553 ntAPPRIS ALT2 TSL 1 (best) BASIC18.94■□□□□ 0.62
CMSS1Q9BQ75 DPEP2-204ENST00000572888 2112 ntAPPRIS P1 TSL 1 (best) BASIC18.94■□□□□ 0.62
CMSS1Q9BQ75 GNA11-201ENST00000078429 4147 ntAPPRIS P1 TSL 1 (best) BASIC18.94■□□□□ 0.62
CMSS1Q9BQ75 AL121899.1-202ENST00000411839 536 ntTSL 5 BASIC18.94■□□□□ 0.62
CMSS1Q9BQ75 TRIM52-AS1-202ENST00000507434 672 ntTSL 1 (best) BASIC18.94■□□□□ 0.62
CMSS1Q9BQ75 HSD17B1P1-201ENST00000590052 955 ntBASIC18.94■□□□□ 0.62
CMSS1Q9BQ75 ZNF444-201ENST00000337080 2042 ntAPPRIS P3 TSL 1 (best) BASIC18.94■□□□□ 0.62
CMSS1Q9BQ75 GCA-201ENST00000233612 1694 ntTSL 2 BASIC18.94■□□□□ 0.62
CMSS1Q9BQ75 RASGRP1-201ENST00000310803 5023 ntAPPRIS P2 TSL 1 (best) BASIC18.94■□□□□ 0.62
CMSS1Q9BQ75 RASGRP1-204ENST00000539159 5021 ntAPPRIS ALT1 TSL 5 BASIC18.94■□□□□ 0.62
CMSS1Q9BQ75 SPRED3-204ENST00000587013 1539 ntTSL 5 BASIC18.94■□□□□ 0.62
CMSS1Q9BQ75 NCKAP1-201ENST00000360982 4989 ntTSL 1 (best) BASIC18.94■□□□□ 0.62
CMSS1Q9BQ75 GALNT8-202ENST00000433855 5977 ntTSL 2 BASIC18.93■□□□□ 0.62
CMSS1Q9BQ75 CELF5-201ENST00000292672 1854 ntAPPRIS P1 TSL 1 (best) BASIC18.93■□□□□ 0.62
CMSS1Q9BQ75 ZKSCAN7-206ENST00000431636 1692 ntTSL 1 (best) BASIC18.93■□□□□ 0.62
CMSS1Q9BQ75 LY6H-201ENST00000342752 951 ntAPPRIS ALT2 TSL 1 (best) BASIC18.93■□□□□ 0.62
CMSS1Q9BQ75 CDCA5-202ENST00000404147 1012 ntTSL 2 BASIC18.93■□□□□ 0.62
CMSS1Q9BQ75 LY6H-202ENST00000414417 1056 ntAPPRIS ALT2 TSL 1 (best) BASIC18.93■□□□□ 0.62
CMSS1Q9BQ75 LY6H-203ENST00000430474 925 ntAPPRIS P3 TSL 3 BASIC18.93■□□□□ 0.62
CMSS1Q9BQ75 DUX4L18-201ENST00000553347 1267 ntBASIC18.93■□□□□ 0.62
CMSS1Q9BQ75 MMP25-AS1-209ENST00000576250 779 ntTSL 5 BASIC18.93■□□□□ 0.62
CMSS1Q9BQ75 ECEL1P1-201ENST00000373592 1742 ntBASIC18.93■□□□□ 0.62
CMSS1Q9BQ75 CREG1-201ENST00000370509 1974 ntAPPRIS P1 TSL 1 (best) BASIC18.93■□□□□ 0.62
CMSS1Q9BQ75 SKIDA1-201ENST00000444772 2667 ntAPPRIS ALT2 TSL 5 BASIC18.93■□□□□ 0.62
CMSS1Q9BQ75 TMEM235-205ENST00000586400 2272 ntTSL 1 (best) BASIC18.93■□□□□ 0.62
CMSS1Q9BQ75 AC079630.1-202ENST00000618127 1840 ntBASIC18.93■□□□□ 0.62
CMSS1Q9BQ75 LTB4R-201ENST00000345363 1616 ntAPPRIS P1 TSL 1 (best) BASIC18.92■□□□□ 0.62
CMSS1Q9BQ75 HNRNPM-202ENST00000348943 2568 ntAPPRIS ALT2 TSL 1 (best) BASIC18.92■□□□□ 0.62
CMSS1Q9BQ75 ARPP19-201ENST00000249822 5301 ntAPPRIS P1 TSL 1 (best) BASIC18.92■□□□□ 0.62
CMSS1Q9BQ75 STARD3NL-201ENST00000009041 1728 ntAPPRIS P1 TSL 1 (best) BASIC18.92■□□□□ 0.62
CMSS1Q9BQ75 H2AFY2-201ENST00000373255 1980 ntAPPRIS P1 TSL 1 (best) BASIC18.92■□□□□ 0.62
CMSS1Q9BQ75 GAL3ST1-202ENST00000401975 1791 ntAPPRIS P1 TSL 1 (best) BASIC18.92■□□□□ 0.62
CMSS1Q9BQ75 AC009531.1-201ENST00000442323 580 ntTSL 4 BASIC18.92■□□□□ 0.62
CMSS1Q9BQ75 AC120024.1-201ENST00000562672 995 ntBASIC18.92■□□□□ 0.62
CMSS1Q9BQ75 RAD9A-201ENST00000307980 2119 ntAPPRIS P1 TSL 1 (best) BASIC18.92■□□□□ 0.62
CMSS1Q9BQ75 FLVCR1-201ENST00000366971 5939 ntAPPRIS P1 TSL 1 (best) BASIC18.92■□□□□ 0.62
CMSS1Q9BQ75 PRPSAP2-201ENST00000268835 1910 ntAPPRIS P1 TSL 1 (best) BASIC18.92■□□□□ 0.62
CMSS1Q9BQ75 RNF39-201ENST00000244360 2206 ntAPPRIS P1 TSL 1 (best) BASIC18.92■□□□□ 0.62
CMSS1Q9BQ75 SAMD8-202ENST00000372690 1654 ntTSL 1 (best) BASIC18.92■□□□□ 0.62
CMSS1Q9BQ75 FRAT1-201ENST00000371021 2649 ntAPPRIS P1 BASIC18.91■□□□□ 0.62
CMSS1Q9BQ75 AUH-201ENST00000303617 1490 ntTSL 1 (best) BASIC18.91■□□□□ 0.62
CMSS1Q9BQ75 R3HCC1-202ENST00000411463 1467 ntAPPRIS P5 TSL 5 BASIC18.91■□□□□ 0.62
CMSS1Q9BQ75 CCDC157-202ENST00000399824 1759 ntAPPRIS ALT2 TSL 1 (best) BASIC18.91■□□□□ 0.62
CMSS1Q9BQ75 DLL3-202ENST00000356433 2055 ntAPPRIS P1 TSL 2 BASIC18.91■□□□□ 0.62
CMSS1Q9BQ75 ESRRAP2-201ENST00000418437 1549 ntBASIC18.91■□□□□ 0.62
CMSS1Q9BQ75 PNCK-215ENST00000447676 1585 ntTSL 2 BASIC18.91■□□□□ 0.62
CMSS1Q9BQ75 AL591684.2-201ENST00000605970 1594 ntTSL 5 BASIC18.91■□□□□ 0.62
CMSS1Q9BQ75 C20orf24-203ENST00000373852 1059 ntTSL 1 (best) BASIC18.91■□□□□ 0.62
CMSS1Q9BQ75 AC007383.2-202ENST00000435627 482 ntTSL 2 BASIC18.91■□□□□ 0.62
CMSS1Q9BQ75 ZGPAT-201ENST00000328969 1945 ntTSL 2 BASIC18.91■□□□□ 0.62
CMSS1Q9BQ75 LIMS2-202ENST00000355119 2045 ntAPPRIS ALT1 TSL 1 (best) BASIC18.91■□□□□ 0.62
CMSS1Q9BQ75 UPF3A-202ENST00000375299 2387 ntAPPRIS P1 TSL 1 (best) BASIC18.91■□□□□ 0.62
CMSS1Q9BQ75 DPH1-203ENST00000570477 1747 ntAPPRIS ALT2 TSL 2 BASIC18.91■□□□□ 0.62
CMSS1Q9BQ75 ANO8-201ENST00000159087 4152 ntAPPRIS P1 TSL 1 (best) BASIC18.91■□□□□ 0.62
CMSS1Q9BQ75 AC127496.7-201ENST00000625110 1798 ntBASIC18.91■□□□□ 0.62
CMSS1Q9BQ75 EPS8L1-202ENST00000245618 2198 ntTSL 1 (best) BASIC18.91■□□□□ 0.62
CMSS1Q9BQ75 NAE1-202ENST00000359087 1825 ntTSL 2 BASIC18.9■□□□□ 0.62
CMSS1Q9BQ75 NRSN1-204ENST00000378491 2354 ntAPPRIS P1 TSL 1 (best) BASIC18.9■□□□□ 0.62
CMSS1Q9BQ75 SHMT1-202ENST00000352886 2437 ntTSL 2 BASIC18.9■□□□□ 0.62
CMSS1Q9BQ75 PFKP-201ENST00000381072 1698 ntTSL 1 (best) BASIC18.9■□□□□ 0.62
CMSS1Q9BQ75 NOX4-204ENST00000393282 560 ntTSL 1 (best) BASIC18.9■□□□□ 0.62
CMSS1Q9BQ75 PLA2G10-201ENST00000438167 1000 ntAPPRIS P1 TSL 1 (best) BASIC18.9■□□□□ 0.62
CMSS1Q9BQ75 GUCD1-207ENST00000447813 895 ntTSL 3 BASIC18.9■□□□□ 0.62
CMSS1Q9BQ75 GPRC5B-202ENST00000535671 1215 ntAPPRIS ALT2 TSL 1 (best) BASIC18.9■□□□□ 0.62
CMSS1Q9BQ75 HOMER3-207ENST00000594794 903 ntTSL 5 BASIC18.9■□□□□ 0.62
CMSS1Q9BQ75 BHLHE23-202ENST00000612929 1109 ntBASIC18.9■□□□□ 0.62
CMSS1Q9BQ75 NKX6-2-201ENST00000368592 2673 ntAPPRIS P1 TSL 1 (best) BASIC18.9■□□□□ 0.62
CMSS1Q9BQ75 SPINT2-201ENST00000301244 1802 ntAPPRIS P2 TSL 1 (best) BASIC18.9■□□□□ 0.62
CMSS1Q9BQ75 NPHS2-201ENST00000367615 1855 ntAPPRIS P1 TSL 1 (best) BASIC18.9■□□□□ 0.62
CMSS1Q9BQ75 TCP1-202ENST00000392168 1878 ntTSL 5 BASIC18.9■□□□□ 0.62
CMSS1Q9BQ75 C6orf136-201ENST00000293604 1978 ntTSL 1 (best) BASIC18.9■□□□□ 0.62
CMSS1Q9BQ75 LSR-203ENST00000360798 1963 ntTSL 2 BASIC18.9■□□□□ 0.62
CMSS1Q9BQ75 NIPA2-202ENST00000359727 1531 ntTSL 1 (best) BASIC18.9■□□□□ 0.62
CMSS1Q9BQ75 CIDEB-201ENST00000258807 2294 ntAPPRIS P1 TSL 1 (best) BASIC18.89■□□□□ 0.61
CMSS1Q9BQ75 EDC4-201ENST00000358933 4800 ntAPPRIS P1 TSL 1 (best) BASIC18.89■□□□□ 0.61
CMSS1Q9BQ75 PPP1R14A-201ENST00000301242 777 ntAPPRIS P1 TSL 1 (best) BASIC18.89■□□□□ 0.61
CMSS1Q9BQ75 C5orf38-202ENST00000397835 681 ntAPPRIS ALT2 TSL 5 BASIC18.89■□□□□ 0.61
CMSS1Q9BQ75 AL136090.1-201ENST00000446849 366 ntTSL 3 BASIC18.89■□□□□ 0.61
CMSS1Q9BQ75 NDEL1-219ENST00000585098 454 ntTSL 3 BASIC18.89■□□□□ 0.61
CMSS1Q9BQ75 OSBPL10-204ENST00000438237 2624 ntAPPRIS ALT2 TSL 2 BASIC18.89■□□□□ 0.61
CMSS1Q9BQ75 CITED4-201ENST00000372638 1316 ntAPPRIS P1 BASIC18.89■□□□□ 0.61
CMSS1Q9BQ75 IKBKG-211ENST00000615874 1460 ntTSL 5 BASIC18.89■□□□□ 0.61
CMSS1Q9BQ75 IKBKG-215ENST00000619941 1463 ntTSL 5 BASIC18.89■□□□□ 0.61
CMSS1Q9BQ75 SAMD13-205ENST00000370673 1567 ntTSL 2 BASIC18.89■□□□□ 0.61
CMSS1Q9BQ75 FAM72A-202ENST00000367128 2398 ntAPPRIS P1 TSL 1 (best) BASIC18.89■□□□□ 0.61
Retrieved 100 of 98,524 protein–RNA pairs in 22.9 ms