Protein–RNA interactions for Protein: Q99942

RNF5, E3 ubiquitin-protein ligase RNF5, humanhuman

Predictions only

Length 180 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RNF5Q99942 TGIF1-206ENST00000405385 1689 ntTSL 2 BASIC17.84■□□□□ 0.45
RNF5Q99942 HSD11B1L-203ENST00000342970 1620 ntTSL 1 (best) BASIC17.84■□□□□ 0.45
RNF5Q99942 C7orf25-203ENST00000431882 1645 ntTSL 2 BASIC17.84■□□□□ 0.45
RNF5Q99942 GMPPB-202ENST00000308388 1582 ntAPPRIS P1 TSL 1 (best) BASIC17.84■□□□□ 0.45
RNF5Q99942 CLPSL2-202ENST00000403376 405 ntAPPRIS P3 TSL 1 (best) BASIC17.84■□□□□ 0.45
RNF5Q99942 GRAMD4P7-201ENST00000578182 1232 ntBASIC17.84■□□□□ 0.45
RNF5Q99942 OSCAR-201ENST00000284648 2055 ntAPPRIS ALT2 TSL 1 (best) BASIC17.84■□□□□ 0.45
RNF5Q99942 C1QTNF4-201ENST00000302514 1664 ntAPPRIS P1 TSL 1 (best) BASIC17.83■□□□□ 0.45
RNF5Q99942 THRA-209ENST00000584985 2421 ntTSL 1 (best) BASIC17.83■□□□□ 0.45
RNF5Q99942 HYAL2-207ENST00000442581 2318 ntAPPRIS P1 TSL 2 BASIC17.83■□□□□ 0.45
RNF5Q99942 CCDC85B-201ENST00000312579 1524 ntAPPRIS P1 BASIC17.83■□□□□ 0.45
RNF5Q99942 ESRRAP2-201ENST00000418437 1549 ntBASIC17.83■□□□□ 0.45
RNF5Q99942 C14orf80-206ENST00000392527 1476 ntAPPRIS ALT2 TSL 1 (best) BASIC17.83■□□□□ 0.45
RNF5Q99942 SDSL-202ENST00000403593 1449 ntAPPRIS P1 TSL 1 (best) BASIC17.83■□□□□ 0.45
RNF5Q99942 HSF1-201ENST00000400780 2105 ntTSL 5 BASIC17.83■□□□□ 0.45
RNF5Q99942 ADRM1-205ENST00000620230 1361 ntTSL 5 BASIC17.83■□□□□ 0.45
RNF5Q99942 ERRFI1-204ENST00000474874 479 ntTSL 3 BASIC17.83■□□□□ 0.44
RNF5Q99942 TMEM80-207ENST00000608174 800 ntTSL 5 BASIC17.83■□□□□ 0.44
RNF5Q99942 NPEPL1-201ENST00000356091 2378 ntAPPRIS P1 TSL 1 (best) BASIC17.83■□□□□ 0.44
RNF5Q99942 CRTAC1-202ENST00000370591 2348 ntAPPRIS P2 TSL 5 BASIC17.83■□□□□ 0.44
RNF5Q99942 POLD2-207ENST00000452185 1659 ntAPPRIS P1 TSL 1 (best) BASIC17.83■□□□□ 0.44
RNF5Q99942 HAS1-201ENST00000222115 2087 ntAPPRIS P3 TSL 1 (best) BASIC17.83■□□□□ 0.44
RNF5Q99942 KCNQ4-204ENST00000509682 1926 ntAPPRIS ALT2 TSL 5 BASIC17.82■□□□□ 0.44
RNF5Q99942 NIPSNAP2-205ENST00000446778 1882 ntTSL 2 BASIC17.82■□□□□ 0.44
RNF5Q99942 AC098864.1-205ENST00000315302 2260 ntTSL 2 BASIC17.82■□□□□ 0.44
RNF5Q99942 LINGO3-201ENST00000585527 2241 ntAPPRIS P1 BASIC17.82■□□□□ 0.44
RNF5Q99942 KCTD8-201ENST00000360029 2587 ntAPPRIS P1 TSL 1 (best) BASIC17.82■□□□□ 0.44
RNF5Q99942 SLC25A39-203ENST00000537904 1274 ntTSL 2 BASIC17.82■□□□□ 0.44
RNF5Q99942 HAUS7-211ENST00000626181 414 ntAPPRIS ALT2 TSL 5 BASIC17.82■□□□□ 0.44
RNF5Q99942 THRA-201ENST00000264637 2538 ntTSL 1 (best) BASIC17.82■□□□□ 0.44
RNF5Q99942 STK32C-201ENST00000298630 2086 ntAPPRIS P1 TSL 1 (best) BASIC17.82■□□□□ 0.44
RNF5Q99942 ME2-208ENST00000638937 2471 ntTSL 5 BASIC17.82■□□□□ 0.44
RNF5Q99942 LACTBL1-201ENST00000426928 1641 ntAPPRIS P5 TSL 5 BASIC17.82■□□□□ 0.44
RNF5Q99942 KCNT1-201ENST00000263604 5245 ntAPPRIS ALT2 TSL 5 BASIC17.82■□□□□ 0.44
RNF5Q99942 ATP5G2-208ENST00000552242 1950 ntAPPRIS P1 TSL 1 (best) BASIC17.82■□□□□ 0.44
RNF5Q99942 MADCAM1-205ENST00000613880 1509 ntAPPRIS ALT2 TSL 5 BASIC17.82■□□□□ 0.44
RNF5Q99942 AC006455.5-202ENST00000615248 2284 ntTSL 1 (best) BASIC17.82■□□□□ 0.44
RNF5Q99942 IQCD-203ENST00000546692 1872 ntTSL 5 BASIC17.82■□□□□ 0.44
RNF5Q99942 GATA3-AS1-201ENST00000355358 2214 ntTSL 2 BASIC17.82■□□□□ 0.44
RNF5Q99942 CORO1A-201ENST00000219150 1803 ntAPPRIS P1 TSL 1 (best) BASIC17.82■□□□□ 0.44
RNF5Q99942 CEBPD-201ENST00000408965 2178 ntAPPRIS P1 BASIC17.81■□□□□ 0.44
RNF5Q99942 DMRT2-209ENST00000635183 2190 ntTSL 5 BASIC17.81■□□□□ 0.44
RNF5Q99942 GFRA4-201ENST00000290417 1427 ntAPPRIS ALT2 TSL 1 (best) BASIC17.81■□□□□ 0.44
RNF5Q99942 CA9-204ENST00000617161 1374 ntTSL 1 (best) BASIC17.81■□□□□ 0.44
RNF5Q99942 NAE1-204ENST00000394074 1654 ntTSL 5 BASIC17.81■□□□□ 0.44
RNF5Q99942 RBM42-203ENST00000588161 1609 ntAPPRIS ALT1 TSL 1 (best) BASIC17.81■□□□□ 0.44
RNF5Q99942 PEMT-202ENST00000395781 1050 ntTSL 2 BASIC17.81■□□□□ 0.44
RNF5Q99942 TRAPPC5-202ENST00000426877 765 ntAPPRIS P1 TSL 2 BASIC17.81■□□□□ 0.44
RNF5Q99942 PICSAR-201ENST00000615826 733 ntTSL 1 (best) BASIC17.81■□□□□ 0.44
RNF5Q99942 PKIB-204ENST00000368448 1561 ntAPPRIS P1 TSL 5 BASIC17.81■□□□□ 0.44
RNF5Q99942 ABHD6-205ENST00000478253 2482 ntAPPRIS P1 TSL 2 BASIC17.81■□□□□ 0.44
RNF5Q99942 TMEM44-211ENST00000473092 1508 ntTSL 1 (best) BASIC17.81■□□□□ 0.44
RNF5Q99942 ABHD17C-201ENST00000258884 2368 ntAPPRIS P1 TSL 1 (best) BASIC17.81■□□□□ 0.44
RNF5Q99942 MAGED2-206ENST00000375068 2189 ntAPPRIS P2 TSL 1 (best) BASIC17.8■□□□□ 0.44
RNF5Q99942 AC105935.1-201ENST00000424174 422 ntTSL 3 BASIC17.8■□□□□ 0.44
RNF5Q99942 AC092171.4-201ENST00000609130 632 ntBASIC17.8■□□□□ 0.44
RNF5Q99942 APBB3-204ENST00000358580 2020 ntTSL 5 BASIC17.8■□□□□ 0.44
RNF5Q99942 FPGS-204ENST00000393706 2230 ntTSL 2 BASIC17.8■□□□□ 0.44
RNF5Q99942 PEX7-201ENST00000318471 1464 ntAPPRIS P1 TSL 1 (best) BASIC17.8■□□□□ 0.44
RNF5Q99942 HSPBP1-206ENST00000587922 1449 ntAPPRIS P1 TSL 1 (best) BASIC17.8■□□□□ 0.44
RNF5Q99942 ASPSCR1-201ENST00000306729 2123 ntAPPRIS ALT2 TSL 2 BASIC17.8■□□□□ 0.44
RNF5Q99942 USF3-203ENST00000491165 2133 ntAPPRIS ALT2 TSL 1 (best) BASIC17.8■□□□□ 0.44
RNF5Q99942 EXOSC6-201ENST00000435634 5153 ntAPPRIS P1 BASIC17.8■□□□□ 0.44
RNF5Q99942 ANXA8-204ENST00000583911 1874 ntTSL 2 BASIC17.8■□□□□ 0.44
RNF5Q99942 IRX4-202ENST00000505790 2538 ntAPPRIS P1 TSL 1 (best) BASIC17.79■□□□□ 0.44
RNF5Q99942 AC011498.4-201ENST00000586020 1803 ntAPPRIS P1 TSL 2 BASIC17.79■□□□□ 0.44
RNF5Q99942 MAGI2-217ENST00000629359 6704 ntTSL 5 BASIC17.79■□□□□ 0.44
RNF5Q99942 FAM173A-201ENST00000219535 806 ntAPPRIS ALT2 TSL 2 BASIC17.79■□□□□ 0.44
RNF5Q99942 MIR17HG-201ENST00000400282 931 ntTSL 1 (best) BASIC17.79■□□□□ 0.44
RNF5Q99942 AL356441.2-201ENST00000443009 864 ntBASIC17.79■□□□□ 0.44
RNF5Q99942 AP002893.1-201ENST00000528885 684 ntTSL 2 BASIC17.79■□□□□ 0.44
RNF5Q99942 KLC1-227ENST00000634686 2229 ntTSL 5 BASIC17.79■□□□□ 0.44
RNF5Q99942 FNTA-208ENST00000529687 1950 ntTSL 2 BASIC17.79■□□□□ 0.44
RNF5Q99942 CADM1-201ENST00000331581 1766 ntTSL 1 (best) BASIC17.79■□□□□ 0.44
RNF5Q99942 PSPH-201ENST00000275605 2131 ntAPPRIS P1 TSL 1 (best) BASIC17.78■□□□□ 0.44
RNF5Q99942 SLC25A11-201ENST00000225665 1897 ntAPPRIS P1 TSL 1 (best) BASIC17.78■□□□□ 0.44
RNF5Q99942 HOMER1-202ENST00000334082 5881 ntAPPRIS P1 TSL 1 (best) BASIC17.78■□□□□ 0.44
RNF5Q99942 GATA2-AS1-201ENST00000464242 1163 ntTSL 2 BASIC17.78■□□□□ 0.44
RNF5Q99942 MLF2-206ENST00000539187 1110 ntAPPRIS P1 TSL 1 (best) BASIC17.78■□□□□ 0.44
RNF5Q99942 AL499627.2-201ENST00000606283 725 ntBASIC17.78■□□□□ 0.44
RNF5Q99942 PICK1-202ENST00000404072 2164 ntAPPRIS P1 TSL 2 BASIC17.78■□□□□ 0.44
RNF5Q99942 HNRNPAB-201ENST00000355836 1602 ntAPPRIS ALT2 TSL 1 (best) BASIC17.78■□□□□ 0.44
RNF5Q99942 SH3RF3-AS1-201ENST00000567491 1604 ntBASIC17.78■□□□□ 0.44
RNF5Q99942 PTGES2-202ENST00000338961 2331 ntAPPRIS P1 TSL 1 (best) BASIC17.78■□□□□ 0.44
RNF5Q99942 ARHGAP27-207ENST00000528273 2319 ntTSL 1 (best) BASIC17.78■□□□□ 0.44
RNF5Q99942 FAM53B-201ENST00000280780 1568 ntTSL 1 (best) BASIC17.78■□□□□ 0.44
RNF5Q99942 METTL21A-210ENST00000458426 1366 ntTSL 1 (best) BASIC17.78■□□□□ 0.44
RNF5Q99942 H1FX-201ENST00000333762 1507 ntAPPRIS P1 BASIC17.77■□□□□ 0.44
RNF5Q99942 GATM-206ENST00000558336 1522 ntTSL 2 BASIC17.77■□□□□ 0.44
RNF5Q99942 CACNG8-201ENST00000270458 8747 ntAPPRIS ALT2 TSL 1 (best) BASIC17.77■□□□□ 0.44
RNF5Q99942 SLC39A14-202ENST00000289952 2137 ntAPPRIS ALT2 TSL 2 BASIC17.77■□□□□ 0.44
RNF5Q99942 ACAD8-202ENST00000374752 1797 ntTSL 2 BASIC17.77■□□□□ 0.44
RNF5Q99942 P2RX2-205ENST00000352418 1200 ntTSL 1 (best) BASIC17.77■□□□□ 0.44
RNF5Q99942 MEIS1-AS3-201ENST00000454167 707 ntTSL 4 BASIC17.77■□□□□ 0.44
RNF5Q99942 RNF225-201ENST00000601382 990 ntAPPRIS P1 BASIC17.77■□□□□ 0.44
RNF5Q99942 SLC35A3-216ENST00000639221 1032 ntTSL 5 BASIC17.77■□□□□ 0.44
RNF5Q99942 CACNB1-201ENST00000344140 1889 ntTSL 1 (best) BASIC17.77■□□□□ 0.43
RNF5Q99942 PIKFYVE-203ENST00000392202 2039 ntTSL 1 (best) BASIC17.77■□□□□ 0.43
RNF5Q99942 ARMC10-202ENST00000323716 2635 ntTSL 1 (best) BASIC17.77■□□□□ 0.43
RNF5Q99942 CTU2-201ENST00000312060 1672 ntAPPRIS P3 TSL 5 BASIC17.77■□□□□ 0.43
Retrieved 100 of 98,524 protein–RNA pairs in 13.4 ms