Protein–RNA interactions for Protein: Q99618

CDCA3, Cell division cycle-associated protein 3, humanhuman

Predicted RBP Predictions only

Length 268 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CDCA3Q99618 ATP6V0E2-204ENST00000464662 513 ntAPPRIS P1 TSL 2 BASIC23.57■■□□□ 1.36
CDCA3Q99618 TMEM182-210ENST00000639249 1025 ntTSL 5 BASIC23.57■■□□□ 1.36
CDCA3Q99618 C8orf58-206ENST00000614574 1955 ntAPPRIS ALT2 TSL 5 BASIC23.57■■□□□ 1.36
CDCA3Q99618 ZNF768-201ENST00000380412 2315 ntAPPRIS P2 TSL 1 (best) BASIC23.57■■□□□ 1.36
CDCA3Q99618 ALG2-203ENST00000476832 1880 ntAPPRIS P1 TSL 1 (best) BASIC23.57■■□□□ 1.36
CDCA3Q99618 DCAF4-206ENST00000509153 1521 ntAPPRIS ALT2 TSL 2 BASIC23.57■■□□□ 1.36
CDCA3Q99618 AL121749.1-202ENST00000609313 2153 ntBASIC23.57■■□□□ 1.36
CDCA3Q99618 C6orf201-202ENST00000380175 1834 ntAPPRIS P1 TSL 1 (best) BASIC23.56■■□□□ 1.36
CDCA3Q99618 LAYN-209ENST00000533265 1703 ntTSL 5 BASIC23.56■■□□□ 1.36
CDCA3Q99618 CYB5R3-201ENST00000352397 2124 ntAPPRIS P1 TSL 1 (best) BASIC23.56■■□□□ 1.36
CDCA3Q99618 LINC02043-201ENST00000419745 1832 ntTSL 2 BASIC23.56■■□□□ 1.36
CDCA3Q99618 SDC3-202ENST00000339394 1580 ntAPPRIS P1 TSL 1 (best) BASIC23.56■■□□□ 1.36
CDCA3Q99618 FAM102B-202ENST00000405454 1585 ntAPPRIS ALT2 TSL 5 BASIC23.56■■□□□ 1.36
CDCA3Q99618 RCC1L-201ENST00000610322 2300 ntAPPRIS P1 TSL 1 (best) BASIC23.55■■□□□ 1.36
CDCA3Q99618 BBC3-202ENST00000341983 1538 ntTSL 1 (best) BASIC23.55■■□□□ 1.36
CDCA3Q99618 NAE1-204ENST00000394074 1654 ntTSL 5 BASIC23.55■■□□□ 1.36
CDCA3Q99618 SPG21-201ENST00000204566 1822 ntAPPRIS P1 TSL 1 (best) BASIC23.55■■□□□ 1.36
CDCA3Q99618 SDHAP3-201ENST00000436493 736 ntTSL 1 (best) BASIC23.55■■□□□ 1.36
CDCA3Q99618 LRRC75A-AS1-202ENST00000470491 1057 ntTSL 1 (best) BASIC23.55■■□□□ 1.36
CDCA3Q99618 AC137761.2-201ENST00000561729 223 ntBASIC23.55■■□□□ 1.36
CDCA3Q99618 AC145350.3-201ENST00000569033 163 ntBASIC23.55■■□□□ 1.36
CDCA3Q99618 GALNS-213ENST00000569433 723 ntTSL 3 BASIC23.55■■□□□ 1.36
CDCA3Q99618 RAP2CP1-201ENST00000605103 478 ntBASIC23.55■■□□□ 1.36
CDCA3Q99618 ANO8-204ENST00000630631 1905 ntTSL 5 BASIC23.55■■□□□ 1.36
CDCA3Q99618 STK19-201ENST00000375331 1663 ntAPPRIS ALT2 TSL 1 (best) BASIC23.54■■□□□ 1.36
CDCA3Q99618 TNFRSF18-203ENST00000379268 1179 ntAPPRIS ALT2 TSL 1 (best) BASIC23.54■■□□□ 1.36
CDCA3Q99618 AC099681.3-201ENST00000421500 939 ntTSL 4 BASIC23.54■■□□□ 1.36
CDCA3Q99618 SMIM12-202ENST00000423898 897 ntAPPRIS P1 TSL 2 BASIC23.54■■□□□ 1.36
CDCA3Q99618 MLF2-206ENST00000539187 1110 ntAPPRIS P1 TSL 1 (best) BASIC23.54■■□□□ 1.36
CDCA3Q99618 AL137779.2-201ENST00000554859 448 ntTSL 2 BASIC23.54■■□□□ 1.36
CDCA3Q99618 Z97986.1-201ENST00000565879 476 ntTSL 5 BASIC23.54■■□□□ 1.36
CDCA3Q99618 LINC02136-201ENST00000567469 530 ntTSL 4 BASIC23.54■■□□□ 1.36
CDCA3Q99618 RNASEH2B-206ENST00000611510 1257 ntTSL 5 BASIC23.54■■□□□ 1.36
CDCA3Q99618 CARM1-202ENST00000344150 2722 ntAPPRIS ALT2 TSL 5 BASIC23.54■■□□□ 1.36
CDCA3Q99618 RING1-201ENST00000374656 1752 ntAPPRIS P1 TSL 1 (best) BASIC23.54■■□□□ 1.36
CDCA3Q99618 SLC22A18-201ENST00000312221 1628 ntAPPRIS P1 TSL 1 (best) BASIC23.54■■□□□ 1.36
CDCA3Q99618 ZDHHC16-203ENST00000353979 1647 ntTSL 1 (best) BASIC23.54■■□□□ 1.36
CDCA3Q99618 FAM110A-206ENST00000541082 1614 ntAPPRIS P1 TSL 3 BASIC23.54■■□□□ 1.36
CDCA3Q99618 NR2F1-AS1-214ENST00000607831 1963 ntTSL 2 BASIC23.54■■□□□ 1.36
CDCA3Q99618 HNRNPD-202ENST00000352301 1667 ntAPPRIS ALT1 TSL 1 (best) BASIC23.54■■□□□ 1.36
CDCA3Q99618 FBXL22-201ENST00000360587 1526 ntAPPRIS P2 TSL 1 (best) BASIC23.54■■□□□ 1.36
CDCA3Q99618 ZNF692-201ENST00000306601 1931 ntAPPRIS P3 TSL 1 (best) BASIC23.53■■□□□ 1.36
CDCA3Q99618 GTPBP3-202ENST00000358792 1951 ntAPPRIS P4 TSL 2 BASIC23.53■■□□□ 1.36
CDCA3Q99618 BDH1-207ENST00000441275 1605 ntTSL 5 BASIC23.53■■□□□ 1.36
CDCA3Q99618 RASGRP2-209ENST00000394429 453 ntTSL 3 BASIC23.53■■□□□ 1.36
CDCA3Q99618 POLR2F-203ENST00000407936 582 ntTSL 3 BASIC23.53■■□□□ 1.36
CDCA3Q99618 ABHD14A-202ENST00000458031 1113 ntTSL 5 BASIC23.53■■□□□ 1.36
CDCA3Q99618 POLR2F-207ENST00000460648 518 ntTSL 4 BASIC23.53■■□□□ 1.36
CDCA3Q99618 AC011511.3-201ENST00000587088 355 ntTSL 2 BASIC23.53■■□□□ 1.36
CDCA3Q99618 AC145676.1-201ENST00000514988 2004 ntBASIC23.53■■□□□ 1.36
CDCA3Q99618 TMEM121-201ENST00000392519 1532 ntAPPRIS P1 TSL 1 (best) BASIC23.53■■□□□ 1.36
CDCA3Q99618 PKIB-204ENST00000368448 1561 ntAPPRIS P1 TSL 5 BASIC23.52■■□□□ 1.36
CDCA3Q99618 NKIRAS2-204ENST00000393880 1644 ntAPPRIS P1 TSL 2 BASIC23.52■■□□□ 1.36
CDCA3Q99618 SH3RF3-AS1-201ENST00000567491 1604 ntBASIC23.52■■□□□ 1.36
CDCA3Q99618 FBXW5-201ENST00000325285 2274 ntAPPRIS P1 TSL 1 (best) BASIC23.52■■□□□ 1.36
CDCA3Q99618 MPST-205ENST00000404802 1453 ntAPPRIS P1 TSL 3 BASIC23.52■■□□□ 1.36
CDCA3Q99618 ACYP2-201ENST00000303536 789 ntTSL 2 BASIC23.52■■□□□ 1.36
CDCA3Q99618 TMEM230-210ENST00000612323 1231 ntTSL 1 (best) BASIC23.52■■□□□ 1.36
CDCA3Q99618 RNF114-202ENST00000622920 1284 ntTSL 5 BASIC23.52■■□□□ 1.36
CDCA3Q99618 PPM1B-202ENST00000345249 1713 ntTSL 1 (best) BASIC23.52■■□□□ 1.36
CDCA3Q99618 OSCAR-211ENST00000617140 1547 ntAPPRIS ALT2 TSL 5 BASIC23.52■■□□□ 1.36
CDCA3Q99618 MME-202ENST00000382989 1319 ntTSL 1 (best) BASIC23.52■■□□□ 1.36
CDCA3Q99618 PHF23-205ENST00000571362 1768 ntTSL 2 BASIC23.52■■□□□ 1.36
CDCA3Q99618 PLSCR3-214ENST00000619711 2066 ntTSL 5 BASIC23.52■■□□□ 1.35
CDCA3Q99618 MBD2-201ENST00000256429 5188 ntAPPRIS P1 TSL 1 (best) BASIC23.51■■□□□ 1.35
CDCA3Q99618 C1QTNF4-201ENST00000302514 1664 ntAPPRIS P1 TSL 1 (best) BASIC23.51■■□□□ 1.35
CDCA3Q99618 STX4-202ENST00000394998 1498 ntTSL 2 BASIC23.51■■□□□ 1.35
CDCA3Q99618 DYRK2-203ENST00000393555 2209 ntAPPRIS ALT1 TSL 1 (best) BASIC23.51■■□□□ 1.35
CDCA3Q99618 DHRS13-202ENST00000394901 2037 ntTSL 1 (best) BASIC23.51■■□□□ 1.35
CDCA3Q99618 NXNL2-201ENST00000375854 805 ntAPPRIS P1 TSL 5 BASIC23.51■■□□□ 1.35
CDCA3Q99618 HSCB-202ENST00000398941 955 ntTSL 2 BASIC23.51■■□□□ 1.35
CDCA3Q99618 AC073343.2-201ENST00000413182 548 ntTSL 4 BASIC23.51■■□□□ 1.35
CDCA3Q99618 CDCA4P2-201ENST00000441182 718 ntBASIC23.51■■□□□ 1.35
CDCA3Q99618 SEC11A-208ENST00000559729 1256 ntTSL 2 BASIC23.51■■□□□ 1.35
CDCA3Q99618 AC012414.4-201ENST00000560839 1074 ntTSL 5 BASIC23.51■■□□□ 1.35
CDCA3Q99618 AC060814.5-201ENST00000630916 1074 ntTSL 2 BASIC23.51■■□□□ 1.35
CDCA3Q99618 AC073111.5-205ENST00000641717 521 ntBASIC23.51■■□□□ 1.35
CDCA3Q99618 ARIH2OS-201ENST00000408959 1598 ntAPPRIS P1 BASIC23.51■■□□□ 1.35
CDCA3Q99618 SHD-204ENST00000599689 1729 ntTSL 5 BASIC23.5■■□□□ 1.35
CDCA3Q99618 AF117829.1-207ENST00000504145 1572 ntTSL 3 BASIC23.5■■□□□ 1.35
CDCA3Q99618 NXT1-201ENST00000254998 1123 ntAPPRIS P1 TSL 1 (best) BASIC23.5■■□□□ 1.35
CDCA3Q99618 SMCO4-201ENST00000298966 1104 ntAPPRIS P1 TSL 1 (best) BASIC23.5■■□□□ 1.35
CDCA3Q99618 AC092468.1-201ENST00000491321 562 ntTSL 4 BASIC23.5■■□□□ 1.35
CDCA3Q99618 FIZ1-205ENST00000592585 489 ntTSL 5 BASIC23.5■■□□□ 1.35
CDCA3Q99618 WNT11-201ENST00000322563 1930 ntAPPRIS P1 TSL 1 (best) BASIC23.5■■□□□ 1.35
CDCA3Q99618 RAB24-201ENST00000303251 1311 ntAPPRIS P1 TSL 1 (best) BASIC23.5■■□□□ 1.35
CDCA3Q99618 C1QL2-201ENST00000272520 2043 ntAPPRIS P1 TSL 1 (best) BASIC23.5■■□□□ 1.35
CDCA3Q99618 ORAI3-204ENST00000566237 1393 ntTSL 5 BASIC23.5■■□□□ 1.35
CDCA3Q99618 FOXG1-201ENST00000313071 4890 ntAPPRIS P1 BASIC23.5■■□□□ 1.35
CDCA3Q99618 KRT72-203ENST00000537672 1813 ntAPPRIS P1 TSL 2 BASIC23.49■■□□□ 1.35
CDCA3Q99618 XBP1-201ENST00000216037 1850 ntAPPRIS P2 TSL 1 (best) BASIC23.49■■□□□ 1.35
CDCA3Q99618 SLC35A2-210ENST00000616181 1614 ntTSL 2 BASIC23.49■■□□□ 1.35
CDCA3Q99618 PCSK1N-201ENST00000218230 1050 ntAPPRIS P1 TSL 1 (best) BASIC23.49■■□□□ 1.35
CDCA3Q99618 SLC25A29-212ENST00000555927 960 ntTSL 2 BASIC23.49■■□□□ 1.35
CDCA3Q99618 AC091138.1-202ENST00000578967 457 ntTSL 2 BASIC23.49■■□□□ 1.35
CDCA3Q99618 KRT18P61-201ENST00000585825 1298 ntBASIC23.49■■□□□ 1.35
CDCA3Q99618 RPS15-210ENST00000592623 873 ntTSL 1 (best) BASIC23.49■■□□□ 1.35
CDCA3Q99618 TPRG1LP1-201ENST00000598702 760 ntBASIC23.49■■□□□ 1.35
CDCA3Q99618 GXYLT1P5-201ENST00000614548 1189 ntBASIC23.49■■□□□ 1.35
CDCA3Q99618 LINC01529-204ENST00000636474 1715 ntBASIC23.49■■□□□ 1.35
Retrieved 100 of 98,524 protein–RNA pairs in 28 ms