Protein–RNA interactions for Protein: Q96S21

RAB40C, Ras-related protein Rab-40C, humanhuman

Predictions only

Length 281 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RAB40CQ96S21 IGFBP2-201ENST00000233809 1439 ntAPPRIS P1 TSL 1 (best) BASIC18.07■□□□□ 0.48
RAB40CQ96S21 MOB4-204ENST00000409360 1447 ntTSL 5 BASIC18.07■□□□□ 0.48
RAB40CQ96S21 MTCH2-201ENST00000302503 2587 ntAPPRIS P1 TSL 1 (best) BASIC18.07■□□□□ 0.48
RAB40CQ96S21 ABCG4-204ENST00000615496 2459 ntAPPRIS P1 TSL 2 BASIC18.07■□□□□ 0.48
RAB40CQ96S21 RNF126P1-201ENST00000567452 1320 ntBASIC18.07■□□□□ 0.48
RAB40CQ96S21 AC012123.1-201ENST00000426194 1661 ntTSL 5 BASIC18.07■□□□□ 0.48
RAB40CQ96S21 TMEM159-201ENST00000233047 2014 ntAPPRIS P1 TSL 1 (best) BASIC18.07■□□□□ 0.48
RAB40CQ96S21 NMI-201ENST00000243346 1623 ntAPPRIS P1 TSL 1 (best) BASIC18.07■□□□□ 0.48
RAB40CQ96S21 ARHGAP5-203ENST00000396582 5786 ntTSL 1 (best) BASIC18.07■□□□□ 0.48
RAB40CQ96S21 ZNF568-208ENST00000586353 1902 ntTSL 1 (best) BASIC18.07■□□□□ 0.48
RAB40CQ96S21 SLC35A3-210ENST00000638371 2298 ntTSL 5 BASIC18.07■□□□□ 0.48
RAB40CQ96S21 PPM1J-201ENST00000309276 1863 ntAPPRIS P1 TSL 1 (best) BASIC18.07■□□□□ 0.48
RAB40CQ96S21 SPRED3-204ENST00000587013 1539 ntTSL 5 BASIC18.07■□□□□ 0.48
RAB40CQ96S21 MED25-211ENST00000617849 1548 ntTSL 1 (best) BASIC18.07■□□□□ 0.48
RAB40CQ96S21 AKT1S1-206ENST00000391834 1849 ntAPPRIS P1 TSL 5 BASIC18.07■□□□□ 0.48
RAB40CQ96S21 NFU1-203ENST00000410022 1467 ntAPPRIS P3 TSL 1 (best) BASIC18.07■□□□□ 0.48
RAB40CQ96S21 MPST-202ENST00000397225 2116 ntAPPRIS P1 TSL 2 BASIC18.07■□□□□ 0.48
RAB40CQ96S21 LINC00092-201ENST00000412122 1726 ntTSL 1 (best) BASIC18.06■□□□□ 0.48
RAB40CQ96S21 RUFY1-201ENST00000319449 2646 ntAPPRIS P3 TSL 1 (best) BASIC18.06■□□□□ 0.48
RAB40CQ96S21 KCNMB4-201ENST00000258111 4731 ntAPPRIS P1 TSL 1 (best) BASIC18.06■□□□□ 0.48
RAB40CQ96S21 PLPP5-209ENST00000529359 2185 ntTSL 1 (best) BASIC18.06■□□□□ 0.48
RAB40CQ96S21 NPHS2-201ENST00000367615 1855 ntAPPRIS P1 TSL 1 (best) BASIC18.06■□□□□ 0.48
RAB40CQ96S21 HMG20B-202ENST00000333651 1596 ntAPPRIS P1 TSL 1 (best) BASIC18.06■□□□□ 0.48
RAB40CQ96S21 DISC1-220ENST00000602873 1553 ntAPPRIS ALT2 TSL 1 (best) BASIC18.06■□□□□ 0.48
RAB40CQ96S21 UPF3A-209ENST00000492270 494 ntTSL 2 BASIC18.06■□□□□ 0.48
RAB40CQ96S21 PLEKHJ1-204ENST00000586608 935 ntTSL 3 BASIC18.06■□□□□ 0.48
RAB40CQ96S21 NFKBID-201ENST00000396901 1834 ntAPPRIS P2 TSL 1 (best) BASIC18.06■□□□□ 0.48
RAB40CQ96S21 NFKBID-211ENST00000641389 1834 ntAPPRIS ALT2 BASIC18.06■□□□□ 0.48
RAB40CQ96S21 SOAT2-201ENST00000301466 2044 ntAPPRIS P1 TSL 1 (best) BASIC18.06■□□□□ 0.48
RAB40CQ96S21 GRK4-201ENST00000345167 2013 ntTSL 1 (best) BASIC18.06■□□□□ 0.48
RAB40CQ96S21 CREB1-205ENST00000430624 2005 ntAPPRIS P1 TSL 5 BASIC18.06■□□□□ 0.48
RAB40CQ96S21 AC139530.1-201ENST00000575312 1977 ntBASIC18.06■□□□□ 0.48
RAB40CQ96S21 ZDHHC16-203ENST00000353979 1647 ntTSL 1 (best) BASIC18.05■□□□□ 0.48
RAB40CQ96S21 LINC01970-201ENST00000581489 1810 ntTSL 1 (best) BASIC18.05■□□□□ 0.48
RAB40CQ96S21 ZFYVE19-201ENST00000299173 1555 ntAPPRIS ALT2 TSL 1 (best) BASIC18.05■□□□□ 0.48
RAB40CQ96S21 GPR137B-202ENST00000366592 2042 ntAPPRIS P2 TSL 1 (best) BASIC18.05■□□□□ 0.48
RAB40CQ96S21 TSPY4-202ENST00000426950 1179 ntAPPRIS P5 TSL 5 BASIC18.05■□□□□ 0.48
RAB40CQ96S21 UBE2D2-205ENST00000505548 1113 ntTSL 1 (best) BASIC18.05■□□□□ 0.48
RAB40CQ96S21 NME2-205ENST00000512737 826 ntAPPRIS P1 TSL 1 (best) BASIC18.05■□□□□ 0.48
RAB40CQ96S21 PITX3-202ENST00000539804 1187 ntAPPRIS P1 TSL 5 BASIC18.05■□□□□ 0.48
RAB40CQ96S21 ADORA2B-201ENST00000304222 1735 ntAPPRIS P1 TSL 1 (best) BASIC18.05■□□□□ 0.48
RAB40CQ96S21 LINC01140-202ENST00000467438 2375 ntTSL 2 BASIC18.05■□□□□ 0.48
RAB40CQ96S21 LRIG1-201ENST00000273261 5273 ntAPPRIS P1 TSL 1 (best) BASIC18.05■□□□□ 0.48
RAB40CQ96S21 TCP1-202ENST00000392168 1878 ntTSL 5 BASIC18.05■□□□□ 0.48
RAB40CQ96S21 EFCAB1-202ENST00000433756 2286 ntTSL 2 BASIC18.05■□□□□ 0.48
RAB40CQ96S21 MTURN-201ENST00000324453 5937 ntAPPRIS P1 TSL 1 (best) BASIC18.04■□□□□ 0.48
RAB40CQ96S21 SCLY-201ENST00000254663 2562 ntAPPRIS P1 TSL 1 (best) BASIC18.04■□□□□ 0.48
RAB40CQ96S21 TMUB1-203ENST00000462940 1549 ntAPPRIS P1 TSL 1 (best) BASIC18.04■□□□□ 0.48
RAB40CQ96S21 SYT6-209ENST00000610222 1707 ntAPPRIS P1 TSL 5 BASIC18.04■□□□□ 0.48
RAB40CQ96S21 BRWD1-202ENST00000341322 2495 ntTSL 1 (best) BASIC18.04■□□□□ 0.48
RAB40CQ96S21 PTPA-210ENST00000414510 1153 ntTSL 1 (best) BASIC18.04■□□□□ 0.48
RAB40CQ96S21 FGF13-AS1-202ENST00000446383 584 ntTSL 3 BASIC18.04■□□□□ 0.48
RAB40CQ96S21 FGF22-202ENST00000586042 1288 ntTSL 1 (best) BASIC18.04■□□□□ 0.48
RAB40CQ96S21 KCNIP1-201ENST00000328939 2014 ntAPPRIS P1 TSL 1 (best) BASIC18.04■□□□□ 0.48
RAB40CQ96S21 AC079630.1-202ENST00000618127 1840 ntBASIC18.04■□□□□ 0.48
RAB40CQ96S21 NFS1-204ENST00000397425 1956 ntTSL 5 BASIC18.04■□□□□ 0.48
RAB40CQ96S21 SH3YL1-201ENST00000356150 1763 ntAPPRIS P1 TSL 1 (best) BASIC18.04■□□□□ 0.48
RAB40CQ96S21 SLC25A47-202ENST00000557052 1552 ntTSL 1 (best) BASIC18.04■□□□□ 0.48
RAB40CQ96S21 AL591684.2-201ENST00000605970 1594 ntTSL 5 BASIC18.04■□□□□ 0.48
RAB40CQ96S21 PPP4R2-201ENST00000356692 4984 ntAPPRIS P1 TSL 1 (best) BASIC18.03■□□□□ 0.48
RAB40CQ96S21 AC131274.2-201ENST00000580697 1507 ntBASIC18.03■□□□□ 0.48
RAB40CQ96S21 NIPSNAP2-205ENST00000446778 1882 ntTSL 2 BASIC18.03■□□□□ 0.48
RAB40CQ96S21 SLC19A1-209ENST00000485649 1896 ntAPPRIS ALT2 TSL 2 BASIC18.03■□□□□ 0.48
RAB40CQ96S21 ARL13B-205ENST00000471138 2206 ntAPPRIS P1 TSL 1 (best) BASIC18.03■□□□□ 0.48
RAB40CQ96S21 PDIA2-201ENST00000219406 1698 ntAPPRIS P2 TSL 1 (best) BASIC18.03■□□□□ 0.48
RAB40CQ96S21 WRAP73-201ENST00000270708 1665 ntAPPRIS P1 TSL 1 (best) BASIC18.03■□□□□ 0.48
RAB40CQ96S21 RUNDC3B-207ENST00000493037 2020 ntAPPRIS ALT2 TSL 1 (best) BASIC18.03■□□□□ 0.48
RAB40CQ96S21 PLPP5-203ENST00000424479 2130 ntAPPRIS P1 TSL 1 (best) BASIC18.03■□□□□ 0.48
RAB40CQ96S21 MDFIC-208ENST00000614186 1068 ntTSL 1 (best) BASIC18.03■□□□□ 0.48
RAB40CQ96S21 TTC34-202ENST00000637179 1775 ntAPPRIS P2 TSL 5 BASIC18.03■□□□□ 0.48
RAB40CQ96S21 MED22-201ENST00000343730 1437 ntAPPRIS P4 TSL 1 (best) BASIC18.03■□□□□ 0.48
RAB40CQ96S21 SLC35F4-206ENST00000556826 1908 ntAPPRIS P1 TSL 5 BASIC18.03■□□□□ 0.48
RAB40CQ96S21 LRRC45-201ENST00000306688 2701 ntAPPRIS P1 TSL 1 (best) BASIC18.03■□□□□ 0.48
RAB40CQ96S21 HSD11B1L-217ENST00000581521 1884 ntAPPRIS P3 TSL 5 BASIC18.03■□□□□ 0.48
RAB40CQ96S21 FKBP1A-211ENST00000618612 1518 ntTSL 1 (best) BASIC18.03■□□□□ 0.48
RAB40CQ96S21 AL137060.1-201ENST00000618151 2648 ntBASIC18.02■□□□□ 0.48
RAB40CQ96S21 JUNB-201ENST00000302754 1820 ntAPPRIS P1 BASIC18.02■□□□□ 0.48
RAB40CQ96S21 METTL9-202ENST00000396014 1817 ntAPPRIS ALT1 TSL 1 (best) BASIC18.02■□□□□ 0.48
RAB40CQ96S21 MPST-203ENST00000401419 1345 ntAPPRIS P1 TSL 1 (best) BASIC18.02■□□□□ 0.48
RAB40CQ96S21 AFDN-202ENST00000351017 5823 ntTSL 5 BASIC18.02■□□□□ 0.48
RAB40CQ96S21 TNFRSF4-201ENST00000379236 1068 ntAPPRIS P1 TSL 1 (best) BASIC18.02■□□□□ 0.48
RAB40CQ96S21 SNHG12-212ENST00000531126 719 ntTSL 1 (best) BASIC18.02■□□□□ 0.48
RAB40CQ96S21 HSD17B1P1-201ENST00000590052 955 ntBASIC18.02■□□□□ 0.48
RAB40CQ96S21 AC018755.3-202ENST00000596210 929 ntBASIC18.02■□□□□ 0.48
RAB40CQ96S21 ZDHHC17-201ENST00000426126 5259 ntAPPRIS P1 TSL 1 (best) BASIC18.02■□□□□ 0.48
RAB40CQ96S21 TLX2-201ENST00000233638 2136 ntAPPRIS P1 TSL 1 (best) BASIC18.02■□□□□ 0.47
RAB40CQ96S21 LIMS2-201ENST00000324938 2111 ntAPPRIS P3 TSL 1 (best) BASIC18.02■□□□□ 0.47
RAB40CQ96S21 LMF1-202ENST00000543238 2103 ntTSL 2 BASIC18.02■□□□□ 0.47
RAB40CQ96S21 SRPK3-202ENST00000370101 1958 ntAPPRIS P3 TSL 1 (best) BASIC18.02■□□□□ 0.47
RAB40CQ96S21 SAMD8-202ENST00000372690 1654 ntTSL 1 (best) BASIC18.02■□□□□ 0.47
RAB40CQ96S21 PNRC1-201ENST00000336032 2065 ntAPPRIS P1 TSL 1 (best) BASIC18.02■□□□□ 0.47
RAB40CQ96S21 CBLN3-201ENST00000267406 2346 ntAPPRIS P1 TSL 1 (best) BASIC18.01■□□□□ 0.47
RAB40CQ96S21 ASRGL1-201ENST00000301776 2182 ntAPPRIS P1 TSL 1 (best) BASIC18.01■□□□□ 0.47
RAB40CQ96S21 PMPCA-201ENST00000371717 2174 ntAPPRIS P1 TSL 1 (best) BASIC18.01■□□□□ 0.47
RAB40CQ96S21 DUX4-203ENST00000565211 1710 ntAPPRIS P2 TSL 1 (best) BASIC18.01■□□□□ 0.47
RAB40CQ96S21 AC009831.1-201ENST00000580420 1582 ntBASIC18.01■□□□□ 0.47
RAB40CQ96S21 PDLIM2-216ENST00000464275 1995 ntTSL 2 BASIC18.01■□□□□ 0.47
RAB40CQ96S21 DPF1-217ENST00000614244 2356 ntTSL 1 (best) BASIC18.01■□□□□ 0.47
RAB40CQ96S21 PXMP2-201ENST00000317479 957 ntAPPRIS P1 TSL 1 (best) BASIC18.01■□□□□ 0.47
RAB40CQ96S21 FAM159A-204ENST00000517870 748 ntAPPRIS P1 TSL 1 (best) BASIC18.01■□□□□ 0.47
Retrieved 100 of 98,524 protein–RNA pairs in 39.3 ms