Protein–RNA interactions for Protein: Q96II8

LRCH3, Leucine-rich repeat and calponin homology domain-containing protein 3, humanhuman

Predictions only

Length 777 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LRCH3Q96II8 OIP5-AS1-208ENST00000560706 473 ntTSL 5 BASIC24.37■■□□□ 1.49
LRCH3Q96II8 PRORSD1P-203ENST00000579162 626 ntTSL 5 BASIC24.37■■□□□ 1.49
LRCH3Q96II8 AC018730.2-201ENST00000598623 443 ntTSL 5 BASIC24.37■■□□□ 1.49
LRCH3Q96II8 C5AR2-202ENST00000600626 1287 ntAPPRIS P1 TSL 1 (best) BASIC24.37■■□□□ 1.49
LRCH3Q96II8 AL161421.1-201ENST00000619666 1101 ntTSL 1 (best) BASIC24.37■■□□□ 1.49
LRCH3Q96II8 AKAP8L-208ENST00000595465 1933 ntTSL 2 BASIC24.37■■□□□ 1.49
LRCH3Q96II8 RAB24-201ENST00000303251 1311 ntAPPRIS P1 TSL 1 (best) BASIC24.36■■□□□ 1.49
LRCH3Q96II8 AC135731.1-201ENST00000569415 2548 ntBASIC24.36■■□□□ 1.49
LRCH3Q96II8 MTMR14-206ENST00000420925 1427 ntAPPRIS ALT2 TSL 2 BASIC24.36■■□□□ 1.49
LRCH3Q96II8 C19orf67-203ENST00000548523 1427 ntAPPRIS P2 TSL 5 BASIC24.36■■□□□ 1.49
LRCH3Q96II8 GUK1-209ENST00000366730 937 ntAPPRIS P3 TSL 3 BASIC24.36■■□□□ 1.49
LRCH3Q96II8 SMUG1P1-201ENST00000590640 811 ntBASIC24.36■■□□□ 1.49
LRCH3Q96II8 MDK-213ENST00000617138 635 ntTSL 2 BASIC24.36■■□□□ 1.49
LRCH3Q96II8 FGFRL1-203ENST00000504138 1663 ntAPPRIS P1 TSL 1 (best) BASIC24.36■■□□□ 1.49
LRCH3Q96II8 SOX1-201ENST00000330949 2842 ntAPPRIS P1 BASIC24.36■■□□□ 1.49
LRCH3Q96II8 TAZ-213ENST00000601016 1889 ntTSL 1 (best) BASIC24.36■■□□□ 1.49
LRCH3Q96II8 PLPPR3-201ENST00000359894 2387 ntAPPRIS P3 TSL 1 (best) BASIC24.36■■□□□ 1.49
LRCH3Q96II8 LINC00969-219ENST00000453324 1439 ntTSL 1 (best) BASIC24.35■■□□□ 1.49
LRCH3Q96II8 PRKAR1B-203ENST00000403562 1917 ntAPPRIS P1 TSL 1 (best) BASIC24.35■■□□□ 1.49
LRCH3Q96II8 PWWP2B-201ENST00000305233 2651 ntAPPRIS P1 TSL 1 (best) BASIC24.35■■□□□ 1.49
LRCH3Q96II8 MSANTD2-201ENST00000239614 2495 ntTSL 2 BASIC24.35■■□□□ 1.49
LRCH3Q96II8 RHBDD2-202ENST00000318622 1878 ntTSL 2 BASIC24.35■■□□□ 1.49
LRCH3Q96II8 U2AF1-204ENST00000459639 1675 ntTSL 1 (best) BASIC24.35■■□□□ 1.49
LRCH3Q96II8 U2AF1L5-204ENST00000623375 1675 ntTSL 1 (best) BASIC24.35■■□□□ 1.49
LRCH3Q96II8 PRKCZ-AS1-201ENST00000333854 1253 ntTSL 2 BASIC24.35■■□□□ 1.49
LRCH3Q96II8 RAC1-202ENST00000356142 907 ntTSL 1 (best) BASIC24.35■■□□□ 1.49
LRCH3Q96II8 AC073343.2-201ENST00000413182 548 ntTSL 4 BASIC24.35■■□□□ 1.49
LRCH3Q96II8 SPI1-203ENST00000533030 661 ntTSL 2 BASIC24.35■■□□□ 1.49
LRCH3Q96II8 RGMA-211ENST00000557420 989 ntTSL 3 BASIC24.35■■□□□ 1.49
LRCH3Q96II8 TFG-210ENST00000620299 1289 ntTSL 5 BASIC24.35■■□□□ 1.49
LRCH3Q96II8 AC105233.4-201ENST00000642045 216 ntBASIC24.35■■□□□ 1.49
LRCH3Q96II8 RPUSD1-207ENST00000565809 1918 ntTSL 2 BASIC24.35■■□□□ 1.49
LRCH3Q96II8 SNUPN-207ENST00000567134 1641 ntAPPRIS P1 TSL 5 BASIC24.35■■□□□ 1.49
LRCH3Q96II8 DLX2-202ENST00000466293 1852 ntTSL 2 BASIC24.34■■□□□ 1.49
LRCH3Q96II8 RDH14-201ENST00000381249 1587 ntAPPRIS P1 TSL 1 (best) BASIC24.34■■□□□ 1.49
LRCH3Q96II8 SMIM19-203ENST00000417410 1466 ntAPPRIS P1 TSL 2 BASIC24.34■■□□□ 1.49
LRCH3Q96II8 LGALS7-201ENST00000378626 466 ntAPPRIS P1 TSL 1 (best) BASIC24.34■■□□□ 1.49
LRCH3Q96II8 PGPEP1L-201ENST00000378919 995 ntTSL 1 (best) BASIC24.34■■□□□ 1.49
LRCH3Q96II8 SLC7A5P2-201ENST00000553010 536 ntBASIC24.34■■□□□ 1.49
LRCH3Q96II8 FGF19-201ENST00000294312 2447 ntAPPRIS P1 TSL 1 (best) BASIC24.34■■□□□ 1.49
LRCH3Q96II8 REXO4-202ENST00000371942 2360 ntAPPRIS P1 TSL 1 (best) BASIC24.34■■□□□ 1.49
LRCH3Q96II8 MPST-205ENST00000404802 1453 ntAPPRIS P1 TSL 3 BASIC24.33■■□□□ 1.49
LRCH3Q96II8 C3orf18-205ENST00000441239 1490 ntTSL 1 (best) BASIC24.33■■□□□ 1.49
LRCH3Q96II8 STARD3NL-202ENST00000396013 1365 ntAPPRIS P1 TSL 5 BASIC24.33■■□□□ 1.49
LRCH3Q96II8 C1QTNF1-207ENST00000580454 1396 ntAPPRIS P1 TSL 5 BASIC24.33■■□□□ 1.49
LRCH3Q96II8 PAIP1-208ENST00000514514 1603 ntTSL 5 BASIC24.33■■□□□ 1.49
LRCH3Q96II8 EMC7-201ENST00000256545 1155 ntAPPRIS P1 TSL 1 (best) BASIC24.33■■□□□ 1.49
LRCH3Q96II8 JSRP1-201ENST00000300961 1138 ntAPPRIS P1 TSL 2 BASIC24.33■■□□□ 1.49
LRCH3Q96II8 PLPP7-201ENST00000372261 972 ntTSL 2 BASIC24.33■■□□□ 1.49
LRCH3Q96II8 ABL2-203ENST00000392043 2140 ntTSL 1 (best) BASIC24.33■■□□□ 1.49
LRCH3Q96II8 AL596275.1-201ENST00000423464 877 ntBASIC24.33■■□□□ 1.49
LRCH3Q96II8 CAMTA1-216ENST00000557126 486 ntTSL 2 BASIC24.33■■□□□ 1.49
LRCH3Q96II8 DUX4L4-201ENST00000566884 1269 ntBASIC24.33■■□□□ 1.49
LRCH3Q96II8 NRM-201ENST00000259953 1755 ntAPPRIS P2 TSL 2 BASIC24.33■■□□□ 1.49
LRCH3Q96II8 KCNQ2-201ENST00000344425 1426 ntTSL 1 (best) BASIC24.33■■□□□ 1.49
LRCH3Q96II8 NREP-202ENST00000379671 2581 ntAPPRIS P1 TSL 1 (best) BASIC24.33■■□□□ 1.48
LRCH3Q96II8 SETD9-211ENST00000628593 1306 ntTSL 1 (best) BASIC24.33■■□□□ 1.48
LRCH3Q96II8 ARHGEF7-205ENST00000375739 5375 ntTSL 1 (best) BASIC24.33■■□□□ 1.48
LRCH3Q96II8 APLP1-201ENST00000221891 2495 ntAPPRIS P1 TSL 1 (best) BASIC24.33■■□□□ 1.48
LRCH3Q96II8 FAM47E-201ENST00000424749 1484 ntAPPRIS P3 TSL 5 BASIC24.32■■□□□ 1.48
LRCH3Q96II8 C14orf80-204ENST00000392522 1630 ntAPPRIS P4 TSL 5 BASIC24.32■■□□□ 1.48
LRCH3Q96II8 CNIH2-201ENST00000311445 1356 ntAPPRIS P2 TSL 1 (best) BASIC24.32■■□□□ 1.48
LRCH3Q96II8 TSKS-202ENST00000358830 1367 ntAPPRIS ALT2 TSL 1 (best) BASIC24.32■■□□□ 1.48
LRCH3Q96II8 SNUPN-201ENST00000308588 1513 ntAPPRIS P1 TSL 1 (best) BASIC24.32■■□□□ 1.48
LRCH3Q96II8 NFS1-201ENST00000306750 738 ntTSL 1 (best) BASIC24.32■■□□□ 1.48
LRCH3Q96II8 TRAPPC5-201ENST00000317378 790 ntAPPRIS P1 TSL 1 (best) BASIC24.32■■□□□ 1.48
LRCH3Q96II8 NOXO1-203ENST00000397280 1147 ntAPPRIS ALT2 TSL 1 (best) BASIC24.32■■□□□ 1.48
LRCH3Q96II8 ZFAS1-206ENST00000450535 1075 ntTSL 3 BASIC24.32■■□□□ 1.48
LRCH3Q96II8 PAQR4-205ENST00000576565 842 ntTSL 2 BASIC24.32■■□□□ 1.48
LRCH3Q96II8 MFSD14C-203ENST00000602917 786 ntAPPRIS P5 TSL 1 (best) BASIC24.32■■□□□ 1.48
LRCH3Q96II8 BCAP31-207ENST00000458587 1810 ntTSL 1 (best) BASIC24.32■■□□□ 1.48
LRCH3Q96II8 KANSL2-215ENST00000553086 1830 ntTSL 5 BASIC24.32■■□□□ 1.48
LRCH3Q96II8 IFNL4-201ENST00000606380 1637 ntAPPRIS P5 TSL 1 (best) BASIC24.32■■□□□ 1.48
LRCH3Q96II8 DDX42-201ENST00000359353 2783 ntTSL 5 BASIC24.31■■□□□ 1.48
LRCH3Q96II8 FBXL22-201ENST00000360587 1526 ntAPPRIS P2 TSL 1 (best) BASIC24.31■■□□□ 1.48
LRCH3Q96II8 CTSA-203ENST00000372459 1972 ntTSL 1 (best) BASIC24.31■■□□□ 1.48
LRCH3Q96II8 GPS1-204ENST00000392358 2276 ntTSL 1 (best) BASIC24.31■■□□□ 1.48
LRCH3Q96II8 SKOR2-203ENST00000620245 3048 ntAPPRIS ALT2 TSL 5 BASIC24.31■■□□□ 1.48
LRCH3Q96II8 PPCS-202ENST00000372560 793 ntTSL 1 (best) BASIC24.31■■□□□ 1.48
LRCH3Q96II8 C19orf73-201ENST00000408991 744 ntAPPRIS P1 BASIC24.31■■□□□ 1.48
LRCH3Q96II8 AC092675.2-201ENST00000413274 541 ntTSL 4 BASIC24.31■■□□□ 1.48
LRCH3Q96II8 FNDC3B-204ENST00000421757 946 ntTSL 1 (best) BASIC24.31■■□□□ 1.48
LRCH3Q96II8 CAVIN3-203ENST00000530979 957 ntTSL 2 BASIC24.31■■□□□ 1.48
LRCH3Q96II8 PTGER2-202ENST00000557436 643 ntTSL 3 BASIC24.31■■□□□ 1.48
LRCH3Q96II8 AC010525.1-201ENST00000585559 441 ntBASIC24.31■■□□□ 1.48
LRCH3Q96II8 KDELR1-203ENST00000597017 1594 ntTSL 2 BASIC24.31■■□□□ 1.48
LRCH3Q96II8 CBWD1-203ENST00000377400 1792 ntAPPRIS P1 TSL 1 (best) BASIC24.31■■□□□ 1.48
LRCH3Q96II8 DEAF1-201ENST00000382409 2500 ntAPPRIS P1 TSL 1 (best) BASIC24.3■■□□□ 1.48
LRCH3Q96II8 RTL8C-201ENST00000257013 1181 ntAPPRIS P1 BASIC24.3■■□□□ 1.48
LRCH3Q96II8 STK32C-205ENST00000456004 607 ntTSL 2 BASIC24.3■■□□□ 1.48
LRCH3Q96II8 WWTR1-AS1-203ENST00000495094 975 ntTSL 1 (best) BASIC24.3■■□□□ 1.48
LRCH3Q96II8 LRRK1-208ENST00000532029 1241 ntTSL 1 (best) BASIC24.3■■□□□ 1.48
LRCH3Q96II8 MAZ-216ENST00000616501 991 ntTSL 5 BASIC24.3■■□□□ 1.48
LRCH3Q96II8 MATK-204ENST00000585778 1994 ntAPPRIS ALT2 TSL 1 (best) BASIC24.3■■□□□ 1.48
LRCH3Q96II8 ZDHHC16-204ENST00000370842 1877 ntAPPRIS ALT1 TSL 5 BASIC24.3■■□□□ 1.48
LRCH3Q96II8 PLPP1-202ENST00000307259 1597 ntAPPRIS ALT1 TSL 1 (best) BASIC24.29■■□□□ 1.48
LRCH3Q96II8 ZBTB42-202ENST00000555360 1411 ntAPPRIS P1 TSL 1 (best) BASIC24.29■■□□□ 1.48
LRCH3Q96II8 RHOD-201ENST00000308831 1129 ntAPPRIS P1 TSL 1 (best) BASIC24.29■■□□□ 1.48
LRCH3Q96II8 CD8B-205ENST00000393761 932 ntTSL 1 (best) BASIC24.29■■□□□ 1.48
LRCH3Q96II8 METTL15-202ENST00000403099 795 ntTSL 5 BASIC24.29■■□□□ 1.48
Retrieved 100 of 98,524 protein–RNA pairs in 18.3 ms