Protein–RNA interactions for Protein: Q969M7

UBE2F, NEDD8-conjugating enzyme UBE2F, humanhuman

Predictions only

Length 185 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
UBE2FQ969M7 RBPJL-202ENST00000372741 1636 ntTSL 1 (best) BASIC20.35■□□□□ 0.85
UBE2FQ969M7 ZFYVE19-201ENST00000299173 1555 ntAPPRIS ALT2 TSL 1 (best) BASIC20.35■□□□□ 0.85
UBE2FQ969M7 NFKBID-201ENST00000396901 1834 ntAPPRIS P2 TSL 1 (best) BASIC20.35■□□□□ 0.85
UBE2FQ969M7 NFKBID-211ENST00000641389 1834 ntAPPRIS ALT2 BASIC20.35■□□□□ 0.85
UBE2FQ969M7 ADGRA2-202ENST00000412232 5651 ntAPPRIS P1 TSL 1 (best) BASIC20.35■□□□□ 0.85
UBE2FQ969M7 AGO3-204ENST00000397828 1035 ntTSL 2 BASIC20.35■□□□□ 0.85
UBE2FQ969M7 TMEM191C-206ENST00000432134 1129 ntAPPRIS ALT2 TSL 5 BASIC20.35■□□□□ 0.85
UBE2FQ969M7 ABHD17AP5-201ENST00000580133 923 ntBASIC20.35■□□□□ 0.85
UBE2FQ969M7 POC1B-209ENST00000549035 2038 ntTSL 2 BASIC20.35■□□□□ 0.85
UBE2FQ969M7 TRIM54-202ENST00000380075 1967 ntAPPRIS P1 TSL 1 (best) BASIC20.35■□□□□ 0.85
UBE2FQ969M7 BID-212ENST00000614949 1988 ntTSL 5 BASIC20.35■□□□□ 0.85
UBE2FQ969M7 PFKP-201ENST00000381072 1698 ntTSL 1 (best) BASIC20.35■□□□□ 0.85
UBE2FQ969M7 UBE2J2-201ENST00000347370 2387 ntTSL 3 BASIC20.35■□□□□ 0.85
UBE2FQ969M7 LOXL1-AS1-210ENST00000567257 2358 ntTSL 2 BASIC20.35■□□□□ 0.85
UBE2FQ969M7 CNTFR-202ENST00000378980 2052 ntAPPRIS P1 TSL 1 (best) BASIC20.34■□□□□ 0.85
UBE2FQ969M7 AC009126.1-201ENST00000501338 2245 ntTSL 2 BASIC20.34■□□□□ 0.85
UBE2FQ969M7 NRL-203ENST00000397002 1976 ntAPPRIS P1 TSL 1 (best) BASIC20.34■□□□□ 0.85
UBE2FQ969M7 ENDOG-201ENST00000372642 1172 ntAPPRIS P1 TSL 1 (best) BASIC20.34■□□□□ 0.85
UBE2FQ969M7 MANF-204ENST00000528157 1153 ntAPPRIS P1 TSL 1 (best) BASIC20.34■□□□□ 0.85
UBE2FQ969M7 AC087393.1-201ENST00000582896 145 ntBASIC20.34■□□□□ 0.85
UBE2FQ969M7 MAGI2-217ENST00000629359 6704 ntTSL 5 BASIC20.34■□□□□ 0.85
UBE2FQ969M7 CIZ1-206ENST00000372954 2731 ntAPPRIS ALT2 TSL 1 (best) BASIC20.34■□□□□ 0.85
UBE2FQ969M7 EBF4-202ENST00000380648 2910 ntAPPRIS P2 TSL 5 BASIC20.34■□□□□ 0.85
UBE2FQ969M7 HSD11B1L-217ENST00000581521 1884 ntAPPRIS P3 TSL 5 BASIC20.34■□□□□ 0.85
UBE2FQ969M7 MED22-201ENST00000343730 1437 ntAPPRIS P4 TSL 1 (best) BASIC20.34■□□□□ 0.85
UBE2FQ969M7 GPR137B-202ENST00000366592 2042 ntAPPRIS P2 TSL 1 (best) BASIC20.34■□□□□ 0.85
UBE2FQ969M7 PTDSS2-201ENST00000308020 2445 ntAPPRIS P1 TSL 1 (best) BASIC20.34■□□□□ 0.85
UBE2FQ969M7 PHOX2B-201ENST00000226382 3030 ntAPPRIS P1 TSL 1 (best) BASIC20.34■□□□□ 0.85
UBE2FQ969M7 ELOA-201ENST00000418390 5154 ntTSL 1 (best) BASIC20.34■□□□□ 0.85
UBE2FQ969M7 SYNGR2-201ENST00000225777 2325 ntAPPRIS P1 TSL 1 (best) BASIC20.33■□□□□ 0.85
UBE2FQ969M7 EHBP1L1-201ENST00000309295 5185 ntAPPRIS P1 TSL 1 (best) BASIC20.33■□□□□ 0.85
UBE2FQ969M7 LINC00092-201ENST00000412122 1726 ntTSL 1 (best) BASIC20.33■□□□□ 0.85
UBE2FQ969M7 FKBP1A-211ENST00000618612 1518 ntTSL 1 (best) BASIC20.33■□□□□ 0.85
UBE2FQ969M7 MPST-203ENST00000401419 1345 ntAPPRIS P1 TSL 1 (best) BASIC20.33■□□□□ 0.85
UBE2FQ969M7 CDKN1C-202ENST00000414822 2051 ntAPPRIS P3 TSL 1 (best) BASIC20.33■□□□□ 0.85
UBE2FQ969M7 EXOSC6-201ENST00000435634 5153 ntAPPRIS P1 BASIC20.33■□□□□ 0.85
UBE2FQ969M7 GGTA1P-203ENST00000481799 1487 ntTSL 1 (best) BASIC20.33■□□□□ 0.85
UBE2FQ969M7 SPOCK3-222ENST00000512681 1457 ntTSL 2 BASIC20.33■□□□□ 0.85
UBE2FQ969M7 GPX1-201ENST00000419349 1106 ntBASIC20.33■□□□□ 0.85
UBE2FQ969M7 FGF22-202ENST00000586042 1288 ntTSL 1 (best) BASIC20.33■□□□□ 0.85
UBE2FQ969M7 HOMER3-205ENST00000542541 1607 ntAPPRIS P3 TSL 1 (best) BASIC20.33■□□□□ 0.84
UBE2FQ969M7 DUSP7-202ENST00000495880 3340 ntAPPRIS P1 TSL 1 (best) BASIC20.33■□□□□ 0.84
UBE2FQ969M7 FOXP4-203ENST00000373060 5948 ntTSL 5 BASIC20.33■□□□□ 0.84
UBE2FQ969M7 FOXP4-204ENST00000373063 5910 ntTSL 1 (best) BASIC20.33■□□□□ 0.84
UBE2FQ969M7 LRCH4-209ENST00000497245 2014 ntTSL 5 BASIC20.32■□□□□ 0.84
UBE2FQ969M7 NEURL4-201ENST00000315614 5182 ntAPPRIS ALT2 TSL 1 (best) BASIC20.32■□□□□ 0.84
UBE2FQ969M7 CFAP77-202ENST00000393215 901 ntAPPRIS ALT2 TSL 5 BASIC20.32■□□□□ 0.84
UBE2FQ969M7 HES4-202ENST00000428771 1040 ntTSL 2 BASIC20.32■□□□□ 0.84
UBE2FQ969M7 OXLD1-203ENST00000571503 803 ntTSL 2 BASIC20.32■□□□□ 0.84
UBE2FQ969M7 AC018755.3-202ENST00000596210 929 ntBASIC20.32■□□□□ 0.84
UBE2FQ969M7 PFKFB4-204ENST00000416568 1575 ntTSL 1 (best) BASIC20.32■□□□□ 0.84
UBE2FQ969M7 IRF3-228ENST00000601291 1556 ntTSL 1 (best) BASIC20.32■□□□□ 0.84
UBE2FQ969M7 AC243965.2-201ENST00000612576 2671 ntTSL 5 BASIC20.32■□□□□ 0.84
UBE2FQ969M7 FBXL19-205ENST00000562319 2462 ntAPPRIS ALT2 TSL 2 BASIC20.32■□□□□ 0.84
UBE2FQ969M7 TGIF1-206ENST00000405385 1689 ntTSL 2 BASIC20.32■□□□□ 0.84
UBE2FQ969M7 DAPK3-202ENST00000545797 2257 ntAPPRIS P1 TSL 2 BASIC20.32■□□□□ 0.84
UBE2FQ969M7 DALRD3-206ENST00000441576 1706 ntTSL 1 (best) BASIC20.31■□□□□ 0.84
UBE2FQ969M7 GADD45A-205ENST00000617962 1142 ntTSL 1 (best) BASIC20.31■□□□□ 0.84
UBE2FQ969M7 PDLIM2-216ENST00000464275 1995 ntTSL 2 BASIC20.31■□□□□ 0.84
UBE2FQ969M7 APPL2-201ENST00000258530 3239 ntAPPRIS P1 TSL 1 (best) BASIC20.31■□□□□ 0.84
UBE2FQ969M7 FBXO17-201ENST00000292852 2386 ntAPPRIS P1 TSL 1 (best) BASIC20.31■□□□□ 0.84
UBE2FQ969M7 SLC25A24-204ENST00000569674 2357 ntBASIC20.31■□□□□ 0.84
UBE2FQ969M7 HNRNPD-202ENST00000352301 1667 ntAPPRIS ALT1 TSL 1 (best) BASIC20.31■□□□□ 0.84
UBE2FQ969M7 PRRT4-207ENST00000535159 2897 ntAPPRIS P1 TSL 5 BASIC20.31■□□□□ 0.84
UBE2FQ969M7 PHF7-201ENST00000327906 2130 ntAPPRIS P1 TSL 1 (best) BASIC20.3■□□□□ 0.84
UBE2FQ969M7 AC026310.3-201ENST00000625186 2373 ntBASIC20.3■□□□□ 0.84
UBE2FQ969M7 TRIM3-202ENST00000359518 3042 ntAPPRIS P1 TSL 5 BASIC20.3■□□□□ 0.84
UBE2FQ969M7 ZC3H14-219ENST00000556945 2075 ntTSL 5 BASIC20.3■□□□□ 0.84
UBE2FQ969M7 APLP1-203ENST00000586861 2052 ntTSL 2 BASIC20.3■□□□□ 0.84
UBE2FQ969M7 ZIM2-201ENST00000593711 2083 ntAPPRIS P1 TSL 1 (best) BASIC20.3■□□□□ 0.84
UBE2FQ969M7 DTWD2-203ENST00000510708 2307 ntAPPRIS P1 TSL 1 (best) BASIC20.3■□□□□ 0.84
UBE2FQ969M7 PDIA2-201ENST00000219406 1698 ntAPPRIS P2 TSL 1 (best) BASIC20.3■□□□□ 0.84
UBE2FQ969M7 ADORA2A-AS1-203ENST00000427813 2027 ntTSL 1 (best) BASIC20.3■□□□□ 0.84
UBE2FQ969M7 HOXC8-201ENST00000040584 1889 ntAPPRIS P1 TSL 1 (best) BASIC20.3■□□□□ 0.84
UBE2FQ969M7 FNTA-208ENST00000529687 1950 ntTSL 2 BASIC20.3■□□□□ 0.84
UBE2FQ969M7 C18orf8-214ENST00000615148 1958 ntTSL 5 BASIC20.3■□□□□ 0.84
UBE2FQ969M7 STARD3NL-201ENST00000009041 1728 ntAPPRIS P1 TSL 1 (best) BASIC20.3■□□□□ 0.84
UBE2FQ969M7 CRACR2B-202ENST00000525077 1578 ntAPPRIS P1 TSL 1 (best) BASIC20.29■□□□□ 0.84
UBE2FQ969M7 MADCAM1-202ENST00000346144 1309 ntAPPRIS ALT2 TSL 1 (best) BASIC20.29■□□□□ 0.84
UBE2FQ969M7 HEXB-201ENST00000261416 1901 ntAPPRIS P1 TSL 1 (best) BASIC20.29■□□□□ 0.84
UBE2FQ969M7 AL353803.4-201ENST00000565882 1934 ntBASIC20.29■□□□□ 0.84
UBE2FQ969M7 DISC1-212ENST00000535983 2505 ntAPPRIS ALT2 TSL 1 (best) BASIC20.29■□□□□ 0.84
UBE2FQ969M7 IGFBP2-201ENST00000233809 1439 ntAPPRIS P1 TSL 1 (best) BASIC20.29■□□□□ 0.84
UBE2FQ969M7 TBL1X-201ENST00000217964 5871 ntTSL 1 (best) BASIC20.29■□□□□ 0.84
UBE2FQ969M7 C19orf12-207ENST00000592153 1504 ntTSL 1 (best) BASIC20.29■□□□□ 0.84
UBE2FQ969M7 SMOX-212ENST00000621355 2322 ntTSL 1 (best) BASIC20.29■□□□□ 0.84
UBE2FQ969M7 UBE2E3-213ENST00000602959 909 ntAPPRIS P1 TSL 5 BASIC20.29■□□□□ 0.84
UBE2FQ969M7 SIMC1-202ENST00000341199 2056 ntAPPRIS P3 TSL 2 BASIC20.29■□□□□ 0.84
UBE2FQ969M7 PPP3CC-201ENST00000240139 2189 ntAPPRIS P3 TSL 1 (best) BASIC20.29■□□□□ 0.84
UBE2FQ969M7 NFU1-203ENST00000410022 1467 ntAPPRIS P3 TSL 1 (best) BASIC20.29■□□□□ 0.84
UBE2FQ969M7 RBM42-205ENST00000589871 1487 ntTSL 5 BASIC20.29■□□□□ 0.84
UBE2FQ969M7 AL591684.2-201ENST00000605970 1594 ntTSL 5 BASIC20.29■□□□□ 0.84
UBE2FQ969M7 GRK3-203ENST00000619906 2873 ntTSL 5 BASIC20.28■□□□□ 0.84
UBE2FQ969M7 SHISA8-202ENST00000621082 1405 ntAPPRIS P2 TSL 5 BASIC20.28■□□□□ 0.84
UBE2FQ969M7 ZNF584-203ENST00000593920 2187 ntTSL 2 BASIC20.28■□□□□ 0.84
UBE2FQ969M7 ZNF48-201ENST00000320159 3234 ntAPPRIS P1 TSL 1 (best) BASIC20.28■□□□□ 0.84
UBE2FQ969M7 C16orf95-206ENST00000618367 974 ntAPPRIS ALT2 TSL 2 BASIC20.28■□□□□ 0.84
UBE2FQ969M7 RASSF5-202ENST00000579436 2064 ntAPPRIS P1 TSL 1 (best) BASIC20.28■□□□□ 0.84
UBE2FQ969M7 LCK-214ENST00000619559 2099 ntAPPRIS P1 TSL 1 (best) BASIC20.28■□□□□ 0.84
UBE2FQ969M7 MOB4-204ENST00000409360 1447 ntTSL 5 BASIC20.27■□□□□ 0.84
Retrieved 100 of 98,524 protein–RNA pairs in 82.4 ms