Protein–RNA interactions for Protein: Q8NFH3

NUP43, Nucleoporin Nup43, humanhuman

Predictions only

Length 380 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NUP43Q8NFH3 OLIG1-201ENST00000382348 2277 ntAPPRIS P1 BASIC20.88■□□□□ 0.93
NUP43Q8NFH3 AMZ2-219ENST00000612294 1498 ntAPPRIS P1 TSL 1 (best) BASIC20.88■□□□□ 0.93
NUP43Q8NFH3 RGS7-204ENST00000366565 2494 ntAPPRIS P3 TSL 1 (best) BASIC20.87■□□□□ 0.93
NUP43Q8NFH3 UBAP1L-203ENST00000559089 1694 ntAPPRIS P1 TSL 1 (best) BASIC20.87■□□□□ 0.93
NUP43Q8NFH3 HMGA2-203ENST00000393578 1993 ntAPPRIS ALT1 TSL 1 (best) BASIC20.87■□□□□ 0.93
NUP43Q8NFH3 KRT16P3-201ENST00000439127 1283 ntBASIC20.87■□□□□ 0.93
NUP43Q8NFH3 LSR-204ENST00000361790 2210 ntAPPRIS P4 TSL 1 (best) BASIC20.87■□□□□ 0.93
NUP43Q8NFH3 KCNQ5-208ENST00000414165 6236 ntTSL 5 BASIC20.87■□□□□ 0.93
NUP43Q8NFH3 FZD8-201ENST00000374694 4030 ntAPPRIS P1 BASIC20.87■□□□□ 0.93
NUP43Q8NFH3 HOMER1-202ENST00000334082 5881 ntAPPRIS P1 TSL 1 (best) BASIC20.87■□□□□ 0.93
NUP43Q8NFH3 CADPS-219ENST00000612439 5455 ntTSL 1 (best) BASIC20.87■□□□□ 0.93
NUP43Q8NFH3 AC009102.2-201ENST00000606772 1639 ntBASIC20.86■□□□□ 0.93
NUP43Q8NFH3 SYT7-203ENST00000539008 2061 ntTSL 5 BASIC20.86■□□□□ 0.93
NUP43Q8NFH3 DONSON-210ENST00000453626 2332 ntTSL 5 BASIC20.86■□□□□ 0.93
NUP43Q8NFH3 ASB1-202ENST00000409297 878 ntTSL 5 BASIC20.86■□□□□ 0.93
NUP43Q8NFH3 MAGED2-206ENST00000375068 2189 ntAPPRIS P2 TSL 1 (best) BASIC20.86■□□□□ 0.93
NUP43Q8NFH3 PHLPP1-201ENST00000262719 6390 ntAPPRIS P1 TSL 1 (best) BASIC20.86■□□□□ 0.93
NUP43Q8NFH3 SLC25A5-AS1-202ENST00000445759 1616 ntTSL 1 (best) BASIC20.86■□□□□ 0.93
NUP43Q8NFH3 FP325331.1-202ENST00000623531 1380 ntBASIC20.85■□□□□ 0.93
NUP43Q8NFH3 C1orf229-201ENST00000623686 2258 ntBASIC20.85■□□□□ 0.93
NUP43Q8NFH3 CCDC85B-201ENST00000312579 1524 ntAPPRIS P1 BASIC20.85■□□□□ 0.93
NUP43Q8NFH3 LINC01529-204ENST00000636474 1715 ntBASIC20.85■□□□□ 0.93
NUP43Q8NFH3 SPAG16-201ENST00000272898 1059 ntTSL 5 BASIC20.85■□□□□ 0.93
NUP43Q8NFH3 GUSBP5-201ENST00000418136 578 ntBASIC20.85■□□□□ 0.93
NUP43Q8NFH3 ZNF302-211ENST00000509528 577 ntTSL 4 BASIC20.85■□□□□ 0.93
NUP43Q8NFH3 TRIR-205ENST00000592273 783 ntTSL 3 BASIC20.85■□□□□ 0.93
NUP43Q8NFH3 BLOC1S4-201ENST00000320776 1617 ntAPPRIS P1 BASIC20.85■□□□□ 0.93
NUP43Q8NFH3 HSD11B1L-203ENST00000342970 1620 ntTSL 1 (best) BASIC20.85■□□□□ 0.93
NUP43Q8NFH3 AUTS2-203ENST00000406775 5950 ntAPPRIS ALT2 TSL 1 (best) BASIC20.85■□□□□ 0.93
NUP43Q8NFH3 GRK4-206ENST00000504933 1971 ntTSL 1 (best) BASIC20.85■□□□□ 0.93
NUP43Q8NFH3 ASPSCR1-208ENST00000580534 1776 ntTSL 2 BASIC20.85■□□□□ 0.93
NUP43Q8NFH3 ST3GAL4-202ENST00000356132 1745 ntTSL 5 BASIC20.84■□□□□ 0.93
NUP43Q8NFH3 DTNB-210ENST00000407186 2275 ntTSL 5 BASIC20.84■□□□□ 0.93
NUP43Q8NFH3 GCA-201ENST00000233612 1694 ntTSL 2 BASIC20.84■□□□□ 0.93
NUP43Q8NFH3 JAGN1-201ENST00000307768 1693 ntAPPRIS P1 TSL 1 (best) BASIC20.84■□□□□ 0.93
NUP43Q8NFH3 EEF1D-203ENST00000419152 1452 ntAPPRIS ALT2 TSL 5 BASIC20.84■□□□□ 0.93
NUP43Q8NFH3 ZDHHC14-204ENST00000414563 3134 ntTSL 1 (best) BASIC20.84■□□□□ 0.93
NUP43Q8NFH3 CRYAA-201ENST00000291554 1139 ntAPPRIS P1 TSL 1 (best) BASIC20.84■□□□□ 0.93
NUP43Q8NFH3 SDHAP1-204ENST00000427415 559 ntTSL 4 BASIC20.84■□□□□ 0.93
NUP43Q8NFH3 TSPAN17-204ENST00000503045 1019 ntTSL 5 BASIC20.84■□□□□ 0.93
NUP43Q8NFH3 AL117209.1-201ENST00000560931 828 ntTSL 3 BASIC20.84■□□□□ 0.93
NUP43Q8NFH3 NKILA-201ENST00000613231 537 ntTSL 4 BASIC20.84■□□□□ 0.93
NUP43Q8NFH3 ARL6IP4-201ENST00000315580 1644 ntAPPRIS P3 TSL 1 (best) BASIC20.84■□□□□ 0.93
NUP43Q8NFH3 USF3-203ENST00000491165 2133 ntAPPRIS ALT2 TSL 1 (best) BASIC20.84■□□□□ 0.93
NUP43Q8NFH3 FAM43A-201ENST00000329759 2494 ntAPPRIS P1 BASIC20.84■□□□□ 0.93
NUP43Q8NFH3 CAMK2N2-201ENST00000296238 1362 ntAPPRIS P1 TSL 1 (best) BASIC20.84■□□□□ 0.93
NUP43Q8NFH3 MIR222HG-201ENST00000602461 1379 ntTSL 5 BASIC20.84■□□□□ 0.93
NUP43Q8NFH3 IQCD-203ENST00000546692 1872 ntTSL 5 BASIC20.84■□□□□ 0.93
NUP43Q8NFH3 CBWD2-203ENST00000416503 1665 ntAPPRIS ALT2 TSL 1 (best) BASIC20.83■□□□□ 0.93
NUP43Q8NFH3 PFKFB4-202ENST00000383734 1491 ntTSL 1 (best) BASIC20.83■□□□□ 0.93
NUP43Q8NFH3 PEMT-202ENST00000395781 1050 ntTSL 2 BASIC20.83■□□□□ 0.93
NUP43Q8NFH3 SLC16A10-206ENST00000612036 1231 ntTSL 5 BASIC20.83■□□□□ 0.93
NUP43Q8NFH3 TUBBP5-204ENST00000635438 565 ntTSL 4 BASIC20.83■□□□□ 0.93
NUP43Q8NFH3 APBB3-204ENST00000358580 2020 ntTSL 5 BASIC20.83■□□□□ 0.92
NUP43Q8NFH3 ASCC1-204ENST00000394915 1510 ntTSL 5 BASIC20.83■□□□□ 0.92
NUP43Q8NFH3 NANOS2-201ENST00000341294 1657 ntAPPRIS P1 BASIC20.83■□□□□ 0.92
NUP43Q8NFH3 WT1-204ENST00000448076 2114 ntAPPRIS ALT2 TSL 2 BASIC20.83■□□□□ 0.92
NUP43Q8NFH3 DTWD2-204ENST00000515439 1275 ntTSL 5 BASIC20.82■□□□□ 0.92
NUP43Q8NFH3 AC136475.3-202ENST00000534742 812 ntTSL 2 BASIC20.82■□□□□ 0.92
NUP43Q8NFH3 NAA30-202ENST00000554703 795 ntTSL 1 (best) BASIC20.82■□□□□ 0.92
NUP43Q8NFH3 CFD-202ENST00000592860 809 ntAPPRIS ALT2 TSL 1 (best) BASIC20.82■□□□□ 0.92
NUP43Q8NFH3 CCDC194-202ENST00000636079 705 ntAPPRIS P1 TSL 5 BASIC20.82■□□□□ 0.92
NUP43Q8NFH3 EN1-201ENST00000295206 2457 ntAPPRIS P1 TSL 2 BASIC20.82■□□□□ 0.92
NUP43Q8NFH3 C1QL3-201ENST00000298943 2493 ntAPPRIS P1 TSL 1 (best) BASIC20.82■□□□□ 0.92
NUP43Q8NFH3 SLC39A4-202ENST00000301305 2174 ntAPPRIS P1 TSL 1 (best) BASIC20.82■□□□□ 0.92
NUP43Q8NFH3 EFCC1-201ENST00000436022 2691 ntAPPRIS P1 TSL 5 BASIC20.81■□□□□ 0.92
NUP43Q8NFH3 PACRGL-201ENST00000295290 1937 ntTSL 5 BASIC20.81■□□□□ 0.92
NUP43Q8NFH3 CLDN5-203ENST00000413119 1760 ntTSL 2 BASIC20.81■□□□□ 0.92
NUP43Q8NFH3 AL353743.1-201ENST00000637846 1769 ntTSL 5 BASIC20.81■□□□□ 0.92
NUP43Q8NFH3 RASSF10-201ENST00000529419 2530 ntAPPRIS P1 BASIC20.81■□□□□ 0.92
NUP43Q8NFH3 CCZ1B-201ENST00000316731 2885 ntAPPRIS P1 TSL 1 (best) BASIC20.81■□□□□ 0.92
NUP43Q8NFH3 IL17RE-201ENST00000383814 2704 ntAPPRIS P2 TSL 1 (best) BASIC20.81■□□□□ 0.92
NUP43Q8NFH3 COMT-203ENST00000403184 2217 ntTSL 2 BASIC20.81■□□□□ 0.92
NUP43Q8NFH3 SPOCK3-222ENST00000512681 1457 ntTSL 2 BASIC20.81■□□□□ 0.92
NUP43Q8NFH3 GNB1-210ENST00000615252 3048 ntTSL 5 BASIC20.8■□□□□ 0.92
NUP43Q8NFH3 ANXA8-204ENST00000583911 1874 ntTSL 2 BASIC20.8■□□□□ 0.92
NUP43Q8NFH3 AC103702.2-201ENST00000433510 1270 ntTSL 2 BASIC20.8■□□□□ 0.92
NUP43Q8NFH3 AK3-203ENST00000447596 705 ntTSL 2 BASIC20.8■□□□□ 0.92
NUP43Q8NFH3 AC004540.2-202ENST00000451264 508 ntTSL 2 BASIC20.8■□□□□ 0.92
NUP43Q8NFH3 SLC25A39-203ENST00000537904 1274 ntTSL 2 BASIC20.8■□□□□ 0.92
NUP43Q8NFH3 BIN1-203ENST00000346226 2401 ntAPPRIS ALT2 TSL 1 (best) BASIC20.8■□□□□ 0.92
NUP43Q8NFH3 RASSF5-202ENST00000579436 2064 ntAPPRIS P1 TSL 1 (best) BASIC20.8■□□□□ 0.92
NUP43Q8NFH3 COMT-206ENST00000407537 1457 ntAPPRIS P3 TSL 5 BASIC20.8■□□□□ 0.92
NUP43Q8NFH3 PPAN-201ENST00000253107 1657 ntAPPRIS P1 TSL 1 (best) BASIC20.8■□□□□ 0.92
NUP43Q8NFH3 RALB-201ENST00000272519 2344 ntAPPRIS P1 TSL 1 (best) BASIC20.79■□□□□ 0.92
NUP43Q8NFH3 HES5-201ENST00000378453 1306 ntAPPRIS P1 TSL 1 (best) BASIC20.79■□□□□ 0.92
NUP43Q8NFH3 NIPSNAP2-205ENST00000446778 1882 ntTSL 2 BASIC20.79■□□□□ 0.92
NUP43Q8NFH3 KCNK13-201ENST00000282146 2522 ntAPPRIS P1 TSL 1 (best) BASIC20.79■□□□□ 0.92
NUP43Q8NFH3 CCDC9-201ENST00000221922 2093 ntAPPRIS P1 TSL 1 (best) BASIC20.79■□□□□ 0.92
NUP43Q8NFH3 TRIM28-202ENST00000341753 2709 ntTSL 1 (best) BASIC20.79■□□□□ 0.92
NUP43Q8NFH3 CORO1A-201ENST00000219150 1803 ntAPPRIS P1 TSL 1 (best) BASIC20.79■□□□□ 0.92
NUP43Q8NFH3 GRAMD4P7-201ENST00000578182 1232 ntBASIC20.79■□□□□ 0.92
NUP43Q8NFH3 VGLL2-201ENST00000326274 2212 ntAPPRIS P1 TSL 1 (best) BASIC20.79■□□□□ 0.92
NUP43Q8NFH3 ADRM1-205ENST00000620230 1361 ntTSL 5 BASIC20.79■□□□□ 0.92
NUP43Q8NFH3 UBALD1-206ENST00000590965 1462 ntTSL 2 BASIC20.79■□□□□ 0.92
NUP43Q8NFH3 SYT6-209ENST00000610222 1707 ntAPPRIS P1 TSL 5 BASIC20.78■□□□□ 0.92
NUP43Q8NFH3 UPF3A-201ENST00000351487 2235 ntTSL 1 (best) BASIC20.78■□□□□ 0.92
NUP43Q8NFH3 SOS2-201ENST00000216373 5498 ntAPPRIS P1 TSL 1 (best) BASIC20.78■□□□□ 0.92
NUP43Q8NFH3 GMPPB-202ENST00000308388 1582 ntAPPRIS P1 TSL 1 (best) BASIC20.78■□□□□ 0.92
NUP43Q8NFH3 KISS1-201ENST00000367194 709 ntAPPRIS P2 TSL 1 (best) BASIC20.78■□□□□ 0.92
Retrieved 100 of 98,524 protein–RNA pairs in 16.2 ms