Protein–RNA interactions for Protein: Q8NC44

RETREG2, Reticulophagy regulator 2, humanhuman

Predictions only

Length 543 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RETREG2Q8NC44 NRIP3-203ENST00000531090 980 ntTSL 2 BASIC25.26■■□□□ 1.63
RETREG2Q8NC44 AC011446.1-201ENST00000591825 458 ntTSL 2 BASIC25.26■■□□□ 1.63
RETREG2Q8NC44 KBTBD13-201ENST00000432196 1377 ntAPPRIS P1 BASIC25.26■■□□□ 1.63
RETREG2Q8NC44 ENKD1-206ENST00000602644 1353 ntTSL 5 BASIC25.26■■□□□ 1.63
RETREG2Q8NC44 RBFOX1-206ENST00000535565 1599 ntTSL 2 BASIC25.26■■□□□ 1.63
RETREG2Q8NC44 PPIL6-203ENST00000440797 1693 ntTSL 1 (best) BASIC25.26■■□□□ 1.63
RETREG2Q8NC44 AC113189.4-201ENST00000575331 5553 ntTSL 1 (best) BASIC25.26■■□□□ 1.63
RETREG2Q8NC44 ZCCHC2-201ENST00000269499 5959 ntAPPRIS P2 TSL 5 BASIC25.25■■□□□ 1.63
RETREG2Q8NC44 TRIR-201ENST00000242784 970 ntAPPRIS P1 TSL 1 (best) BASIC25.25■■□□□ 1.63
RETREG2Q8NC44 CYC1-201ENST00000318911 1240 ntAPPRIS P1 TSL 1 (best) BASIC25.25■■□□□ 1.63
RETREG2Q8NC44 SRM-201ENST00000376957 1266 ntAPPRIS P1 TSL 1 (best) BASIC25.25■■□□□ 1.63
RETREG2Q8NC44 AC099791.1-201ENST00000416440 715 ntBASIC25.25■■□□□ 1.63
RETREG2Q8NC44 DAZAP1-201ENST00000233078 2160 ntAPPRIS P2 TSL 1 (best) BASIC25.25■■□□□ 1.63
RETREG2Q8NC44 PEX5-205ENST00000420616 2477 ntAPPRIS P1 TSL 1 (best) BASIC25.24■■□□□ 1.63
RETREG2Q8NC44 PTH1R-207ENST00000449590 2123 ntAPPRIS P1 TSL 1 (best) BASIC25.24■■□□□ 1.63
RETREG2Q8NC44 SLC10A4-201ENST00000273861 1790 ntAPPRIS P1 TSL 1 (best) BASIC25.24■■□□□ 1.63
RETREG2Q8NC44 CDIPT-207ENST00000566113 1671 ntTSL 2 BASIC25.24■■□□□ 1.63
RETREG2Q8NC44 B3GNT4-201ENST00000324189 1642 ntTSL 1 (best) BASIC25.24■■□□□ 1.63
RETREG2Q8NC44 ZFYVE19-201ENST00000299173 1555 ntAPPRIS ALT2 TSL 1 (best) BASIC25.24■■□□□ 1.63
RETREG2Q8NC44 LHPP-201ENST00000368839 1522 ntTSL 1 (best) BASIC25.24■■□□□ 1.63
RETREG2Q8NC44 NGEF-203ENST00000409079 1022 ntTSL 1 (best) BASIC25.24■■□□□ 1.63
RETREG2Q8NC44 HES6-206ENST00000409574 738 ntTSL 2 BASIC25.24■■□□□ 1.63
RETREG2Q8NC44 ORAI3-202ENST00000562699 628 ntTSL 2 BASIC25.24■■□□□ 1.63
RETREG2Q8NC44 AC104564.5-201ENST00000584986 278 ntTSL 3 BASIC25.24■■□□□ 1.63
RETREG2Q8NC44 AC241377.3-202ENST00000626088 1088 ntBASIC25.24■■□□□ 1.63
RETREG2Q8NC44 SLC12A5-217ENST00000626937 1224 ntTSL 1 (best) BASIC25.24■■□□□ 1.63
RETREG2Q8NC44 AC241585.3-202ENST00000628937 1088 ntBASIC25.24■■□□□ 1.63
RETREG2Q8NC44 AC245100.8-202ENST00000629247 1058 ntBASIC25.24■■□□□ 1.63
RETREG2Q8NC44 ZFAND4-205ENST00000374371 2283 ntTSL 5 BASIC25.24■■□□□ 1.63
RETREG2Q8NC44 AK8-201ENST00000298545 2072 ntAPPRIS P1 TSL 1 (best) BASIC25.24■■□□□ 1.63
RETREG2Q8NC44 LGALS9B-202ENST00000423676 1713 ntAPPRIS ALT2 TSL 1 (best) BASIC25.23■■□□□ 1.63
RETREG2Q8NC44 PITX2-209ENST00000557119 1889 ntTSL 2 BASIC25.23■■□□□ 1.63
RETREG2Q8NC44 PON2-217ENST00000633192 1876 ntTSL 1 (best) BASIC25.23■■□□□ 1.63
RETREG2Q8NC44 FKBP8-209ENST00000597960 1781 ntAPPRIS P3 TSL 5 BASIC25.23■■□□□ 1.63
RETREG2Q8NC44 ALDH1A3-203ENST00000557963 1670 ntBASIC25.23■■□□□ 1.63
RETREG2Q8NC44 ERF-201ENST00000222329 2698 ntAPPRIS P1 TSL 1 (best) BASIC25.22■■□□□ 1.63
RETREG2Q8NC44 PHC2-202ENST00000373418 2550 ntAPPRIS ALT2 TSL 1 (best) BASIC25.22■■□□□ 1.63
RETREG2Q8NC44 FAHD1-203ENST00000427358 1974 ntAPPRIS P1 BASIC25.22■■□□□ 1.63
RETREG2Q8NC44 PLPP5-201ENST00000419686 794 ntTSL 2 BASIC25.22■■□□□ 1.63
RETREG2Q8NC44 ACAP1-206ENST00000571471 320 ntTSL 2 BASIC25.22■■□□□ 1.63
RETREG2Q8NC44 MYDGF-203ENST00000599630 713 ntTSL 2 BASIC25.22■■□□□ 1.63
RETREG2Q8NC44 FAM83F-202ENST00000473717 1917 ntTSL 1 (best) BASIC25.22■■□□□ 1.63
RETREG2Q8NC44 ARPC5L-201ENST00000259477 1325 ntAPPRIS P1 TSL 1 (best) BASIC25.21■■□□□ 1.63
RETREG2Q8NC44 GFOD1-204ENST00000603223 2388 ntTSL 2 BASIC25.21■■□□□ 1.63
RETREG2Q8NC44 CREB3L2-203ENST00000452463 1105 ntTSL 1 (best) BASIC25.21■■□□□ 1.63
RETREG2Q8NC44 ZNF846-212ENST00000592859 1206 ntTSL 2 BASIC25.21■■□□□ 1.63
RETREG2Q8NC44 CBWD3-213ENST00000618217 1611 ntTSL 1 (best) BASIC25.21■■□□□ 1.63
RETREG2Q8NC44 BCL2L12-212ENST00000616144 1854 ntAPPRIS P3 TSL 1 (best) BASIC25.21■■□□□ 1.63
RETREG2Q8NC44 CEP104-201ENST00000378223 1121 ntTSL 1 (best) BASIC25.2■■□□□ 1.62
RETREG2Q8NC44 KCNS1-202ENST00000537075 2136 ntAPPRIS P1 TSL 1 (best) BASIC25.2■■□□□ 1.62
RETREG2Q8NC44 RHOF-204ENST00000537265 699 ntTSL 2 BASIC25.2■■□□□ 1.62
RETREG2Q8NC44 RASEF-201ENST00000340717 1765 ntTSL 2 BASIC25.2■■□□□ 1.62
RETREG2Q8NC44 ST3GAL5-268ENST00000640982 2465 ntAPPRIS ALT2 TSL 5 BASIC25.2■■□□□ 1.62
RETREG2Q8NC44 KISS1R-201ENST00000234371 1625 ntAPPRIS P1 TSL 1 (best) BASIC25.19■■□□□ 1.62
RETREG2Q8NC44 WISP2-203ENST00000372868 1600 ntAPPRIS P1 TSL 3 BASIC25.19■■□□□ 1.62
RETREG2Q8NC44 RANBP10-206ENST00000602677 2374 ntTSL 5 BASIC25.19■■□□□ 1.62
RETREG2Q8NC44 PARP9-207ENST00000492382 1837 ntTSL 1 (best) BASIC25.19■■□□□ 1.62
RETREG2Q8NC44 AGAP3-201ENST00000335367 2675 ntTSL 1 (best) BASIC25.19■■□□□ 1.62
RETREG2Q8NC44 AC136469.2-201ENST00000623944 1028 ntBASIC25.19■■□□□ 1.62
RETREG2Q8NC44 C14orf80-206ENST00000392527 1476 ntAPPRIS ALT2 TSL 1 (best) BASIC25.19■■□□□ 1.62
RETREG2Q8NC44 NPAS1-208ENST00000602212 2117 ntAPPRIS P1 TSL 1 (best) BASIC25.19■■□□□ 1.62
RETREG2Q8NC44 DACT3-201ENST00000300875 2526 ntTSL 1 (best) BASIC25.19■■□□□ 1.62
RETREG2Q8NC44 GRK4-202ENST00000398051 2068 ntTSL 1 (best) BASIC25.19■■□□□ 1.62
RETREG2Q8NC44 WTAP-201ENST00000337387 1622 ntTSL 1 (best) BASIC25.19■■□□□ 1.62
RETREG2Q8NC44 FBXW4-201ENST00000331272 2483 ntAPPRIS P1 TSL 1 (best) BASIC25.19■■□□□ 1.62
RETREG2Q8NC44 ACBD4-214ENST00000591859 1998 ntTSL 1 (best) BASIC25.18■■□□□ 1.62
RETREG2Q8NC44 PSIP1-202ENST00000380716 1889 ntTSL 5 BASIC25.18■■□□□ 1.62
RETREG2Q8NC44 TSPY4-201ENST00000383008 1143 ntAPPRIS ALT2 TSL 5 BASIC25.18■■□□□ 1.62
RETREG2Q8NC44 SIRT3-215ENST00000532956 1235 ntTSL 2 BASIC25.18■■□□□ 1.62
RETREG2Q8NC44 HNRNPAB-201ENST00000355836 1602 ntAPPRIS ALT2 TSL 1 (best) BASIC25.18■■□□□ 1.62
RETREG2Q8NC44 LINC01116-201ENST00000295549 1407 ntTSL 2 BASIC25.18■■□□□ 1.62
RETREG2Q8NC44 CCDC106-205ENST00000588740 1404 ntAPPRIS P1 TSL 1 (best) BASIC25.18■■□□□ 1.62
RETREG2Q8NC44 MAP6D1-201ENST00000318631 2111 ntAPPRIS P2 TSL 1 (best) BASIC25.18■■□□□ 1.62
RETREG2Q8NC44 C17orf82-201ENST00000623772 1530 ntBASIC25.17■■□□□ 1.62
RETREG2Q8NC44 NANOS2-201ENST00000341294 1657 ntAPPRIS P1 BASIC25.17■■□□□ 1.62
RETREG2Q8NC44 LEFTY1-201ENST00000272134 1626 ntAPPRIS P1 TSL 1 (best) BASIC25.17■■□□□ 1.62
RETREG2Q8NC44 JTB-203ENST00000368589 1216 ntTSL 2 BASIC25.17■■□□□ 1.62
RETREG2Q8NC44 HRH3-203ENST00000611492 900 ntTSL 1 (best) BASIC25.17■■□□□ 1.62
RETREG2Q8NC44 ADSSL1-201ENST00000330877 1766 ntAPPRIS P1 TSL 1 (best) BASIC25.17■■□□□ 1.62
RETREG2Q8NC44 KCNIP1-203ENST00000390656 2249 ntTSL 5 BASIC25.17■■□□□ 1.62
RETREG2Q8NC44 STARD3NL-201ENST00000009041 1728 ntAPPRIS P1 TSL 1 (best) BASIC25.17■■□□□ 1.62
RETREG2Q8NC44 RUNDC3A-202ENST00000426726 2048 ntAPPRIS P1 TSL 1 (best) BASIC25.17■■□□□ 1.62
RETREG2Q8NC44 C1QTNF1-207ENST00000580454 1396 ntAPPRIS P1 TSL 5 BASIC25.17■■□□□ 1.62
RETREG2Q8NC44 SCAMP3-202ENST00000355379 1537 ntTSL 1 (best) BASIC25.17■■□□□ 1.62
RETREG2Q8NC44 PCYT2-201ENST00000331285 2147 ntTSL 2 BASIC25.16■■□□□ 1.62
RETREG2Q8NC44 DACT3-202ENST00000391916 2834 ntAPPRIS P1 TSL 5 BASIC25.16■■□□□ 1.62
RETREG2Q8NC44 TMEM61-201ENST00000371268 1097 ntAPPRIS P1 TSL 1 (best) BASIC25.16■■□□□ 1.62
RETREG2Q8NC44 STOX1-202ENST00000399162 935 ntTSL 1 (best) BASIC25.16■■□□□ 1.62
RETREG2Q8NC44 STOX1-203ENST00000399165 1135 ntTSL 1 (best) BASIC25.16■■□□□ 1.62
RETREG2Q8NC44 AC233992.3-201ENST00000607491 485 ntBASIC25.16■■□□□ 1.62
RETREG2Q8NC44 KLC1-201ENST00000246489 2294 ntAPPRIS P1 TSL 5 BASIC25.16■■□□□ 1.62
RETREG2Q8NC44 KLC1-224ENST00000557450 2265 ntTSL 5 BASIC25.16■■□□□ 1.62
RETREG2Q8NC44 HSF1-201ENST00000400780 2105 ntTSL 5 BASIC25.16■■□□□ 1.62
RETREG2Q8NC44 TSNARE1-208ENST00000524325 1963 ntAPPRIS P3 TSL 2 BASIC25.16■■□□□ 1.62
RETREG2Q8NC44 GDI1-204ENST00000447750 2474 ntAPPRIS P1 TSL 1 (best) BASIC25.15■■□□□ 1.62
RETREG2Q8NC44 USF2-207ENST00000595068 1612 ntTSL 5 BASIC25.15■■□□□ 1.62
RETREG2Q8NC44 BMP6-201ENST00000283147 2780 ntAPPRIS P1 TSL 1 (best) BASIC25.15■■□□□ 1.62
RETREG2Q8NC44 AC007009.1-201ENST00000458624 429 ntTSL 2 BASIC25.15■■□□□ 1.62
RETREG2Q8NC44 C15orf61-202ENST00000557807 769 ntTSL 2 BASIC25.15■■□□□ 1.62
RETREG2Q8NC44 DIRAS1-202ENST00000585334 774 ntAPPRIS P1 BASIC25.15■■□□□ 1.62
Retrieved 100 of 98,524 protein–RNA pairs in 19.1 ms