Protein–RNA interactions for Protein: Q86TM3

DDX53, Probable ATP-dependent RNA helicase DDX53, humanhuman

Known RBP Predictions only

Length 631 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
DDX53Q86TM3 ADPRHL2-201ENST00000373178 1668 ntAPPRIS P1 TSL 1 (best) BASIC23.84■■□□□ 1.41
DDX53Q86TM3 PKIB-204ENST00000368448 1561 ntAPPRIS P1 TSL 5 BASIC23.84■■□□□ 1.41
DDX53Q86TM3 ARIH2OS-201ENST00000408959 1598 ntAPPRIS P1 BASIC23.84■■□□□ 1.41
DDX53Q86TM3 CTNNAL1-202ENST00000374593 761 ntTSL 3 BASIC23.84■■□□□ 1.41
DDX53Q86TM3 GLI4-210ENST00000523522 1297 ntAPPRIS P1 TSL 1 (best) BASIC23.84■■□□□ 1.41
DDX53Q86TM3 NEDD4L-225ENST00000589054 1033 ntTSL 3 BASIC23.84■■□□□ 1.41
DDX53Q86TM3 CYB561D2-205ENST00000425346 1319 ntAPPRIS P1 TSL 1 (best) BASIC23.84■■□□□ 1.41
DDX53Q86TM3 RHBDL3-204ENST00000538145 1338 ntAPPRIS ALT2 TSL 1 (best) BASIC23.84■■□□□ 1.41
DDX53Q86TM3 NAE1-204ENST00000394074 1654 ntTSL 5 BASIC23.83■■□□□ 1.41
DDX53Q86TM3 TLX1-203ENST00000467928 1838 ntTSL 1 (best) BASIC23.83■■□□□ 1.41
DDX53Q86TM3 GP9-201ENST00000307395 889 ntAPPRIS P1 TSL 1 (best) BASIC23.83■■□□□ 1.41
DDX53Q86TM3 GADD45A-201ENST00000370985 803 ntTSL 1 (best) BASIC23.83■■□□□ 1.41
DDX53Q86TM3 KRTAP5-2-201ENST00000412090 1118 ntAPPRIS P1 BASIC23.83■■□□□ 1.41
DDX53Q86TM3 MYD88-205ENST00000424893 1279 ntAPPRIS ALT2 TSL 1 (best) BASIC23.83■■□□□ 1.41
DDX53Q86TM3 AL355877.1-204ENST00000451482 1078 ntTSL 1 (best) BASIC23.83■■□□□ 1.41
DDX53Q86TM3 ATOX1-207ENST00000524142 749 ntAPPRIS P1 TSL 5 BASIC23.83■■□□□ 1.41
DDX53Q86TM3 ZFPL1-203ENST00000525509 478 ntTSL 2 BASIC23.83■■□□□ 1.41
DDX53Q86TM3 EDA-209ENST00000525810 843 ntTSL 1 (best) BASIC23.83■■□□□ 1.41
DDX53Q86TM3 LAYN-209ENST00000533265 1703 ntTSL 5 BASIC23.83■■□□□ 1.41
DDX53Q86TM3 SLC35A2-210ENST00000616181 1614 ntTSL 2 BASIC23.83■■□□□ 1.41
DDX53Q86TM3 NRG1-210ENST00000520407 1955 ntTSL 1 (best) BASIC23.83■■□□□ 1.41
DDX53Q86TM3 DOK3-205ENST00000501403 1872 ntAPPRIS P1 TSL 5 BASIC23.83■■□□□ 1.4
DDX53Q86TM3 ZNF598-202ENST00000562103 2717 ntAPPRIS P1 TSL 1 (best) BASIC23.83■■□□□ 1.4
DDX53Q86TM3 C2CD4B-201ENST00000380392 1579 ntAPPRIS P1 TSL 2 BASIC23.82■■□□□ 1.4
DDX53Q86TM3 PYCARD-201ENST00000247470 990 ntAPPRIS P1 TSL 1 (best) BASIC23.82■■□□□ 1.4
DDX53Q86TM3 CDKN2AIPNL-201ENST00000395009 800 ntTSL 1 (best) BASIC23.82■■□□□ 1.4
DDX53Q86TM3 AC090192.1-201ENST00000517740 490 ntBASIC23.82■■□□□ 1.4
DDX53Q86TM3 AP005435.1-201ENST00000529293 1178 ntBASIC23.82■■□□□ 1.4
DDX53Q86TM3 OTUB1-212ENST00000543988 1259 ntTSL 1 (best) BASIC23.82■■□□□ 1.4
DDX53Q86TM3 AL137784.2-201ENST00000607332 1000 ntBASIC23.82■■□□□ 1.4
DDX53Q86TM3 H2AFB3-201ENST00000615853 591 ntAPPRIS P1 BASIC23.82■■□□□ 1.4
DDX53Q86TM3 ZFAND2B-202ENST00000409097 1765 ntTSL 2 BASIC23.82■■□□□ 1.4
DDX53Q86TM3 TRIM54-201ENST00000296098 2027 ntTSL 1 (best) BASIC23.82■■□□□ 1.4
DDX53Q86TM3 CFAP99-207ENST00000635017 2298 ntTSL 5 BASIC23.82■■□□□ 1.4
DDX53Q86TM3 C1QTNF4-201ENST00000302514 1664 ntAPPRIS P1 TSL 1 (best) BASIC23.82■■□□□ 1.4
DDX53Q86TM3 SDC3-202ENST00000339394 1580 ntAPPRIS P1 TSL 1 (best) BASIC23.82■■□□□ 1.4
DDX53Q86TM3 B3GAT3-201ENST00000265471 1641 ntAPPRIS P1 TSL 1 (best) BASIC23.81■■□□□ 1.4
DDX53Q86TM3 RNASEH2B-201ENST00000336617 1629 ntAPPRIS P1 TSL 1 (best) BASIC23.81■■□□□ 1.4
DDX53Q86TM3 KRT72-201ENST00000293745 2015 ntAPPRIS P1 TSL 1 (best) BASIC23.81■■□□□ 1.4
DDX53Q86TM3 PON2-218ENST00000633531 1653 ntAPPRIS P1 TSL 1 (best) BASIC23.81■■□□□ 1.4
DDX53Q86TM3 YJEFN3-203ENST00000514277 995 ntTSL 1 (best) BASIC23.81■■□□□ 1.4
DDX53Q86TM3 CCDC92B-201ENST00000575506 885 ntBASIC23.81■■□□□ 1.4
DDX53Q86TM3 SUZ12P1-202ENST00000578070 929 ntTSL 5 BASIC23.81■■□□□ 1.4
DDX53Q86TM3 MIF4GD-211ENST00000580571 952 ntTSL 2 BASIC23.81■■□□□ 1.4
DDX53Q86TM3 MESP2-201ENST00000341735 1552 ntAPPRIS P1 TSL 1 (best) BASIC23.81■■□□□ 1.4
DDX53Q86TM3 IRF3-228ENST00000601291 1556 ntTSL 1 (best) BASIC23.81■■□□□ 1.4
DDX53Q86TM3 LINC01529-204ENST00000636474 1715 ntBASIC23.81■■□□□ 1.4
DDX53Q86TM3 SH3RF3-AS1-201ENST00000567491 1604 ntBASIC23.81■■□□□ 1.4
DDX53Q86TM3 AC144652.1-201ENST00000609974 1624 ntBASIC23.81■■□□□ 1.4
DDX53Q86TM3 ESR2-202ENST00000341099 2060 ntAPPRIS P1 TSL 1 (best) BASIC23.8■■□□□ 1.4
DDX53Q86TM3 ATG16L2-201ENST00000321297 2243 ntAPPRIS P1 TSL 1 (best) BASIC23.8■■□□□ 1.4
DDX53Q86TM3 MXI1-201ENST00000239007 2424 ntAPPRIS ALT1 TSL 1 (best) BASIC23.8■■□□□ 1.4
DDX53Q86TM3 TBL1X-201ENST00000217964 5871 ntTSL 1 (best) BASIC23.8■■□□□ 1.4
DDX53Q86TM3 INS-202ENST00000381330 597 ntAPPRIS P1 TSL 1 (best) BASIC23.8■■□□□ 1.4
DDX53Q86TM3 LHPP-203ENST00000392757 840 ntTSL 3 BASIC23.8■■□□□ 1.4
DDX53Q86TM3 PRMT2-204ENST00000397628 954 ntTSL 2 BASIC23.8■■□□□ 1.4
DDX53Q86TM3 SLC26A1-203ENST00000398520 1111 ntTSL 1 (best) BASIC23.8■■□□□ 1.4
DDX53Q86TM3 AC019068.1-201ENST00000415226 552 ntTSL 4 BASIC23.8■■□□□ 1.4
DDX53Q86TM3 MELTF-AS1-202ENST00000415244 951 ntTSL 1 (best) BASIC23.8■■□□□ 1.4
DDX53Q86TM3 ATP6V0E2-204ENST00000464662 513 ntAPPRIS P1 TSL 2 BASIC23.8■■□□□ 1.4
DDX53Q86TM3 ZNF302-209ENST00000507959 854 ntTSL 2 BASIC23.8■■□□□ 1.4
DDX53Q86TM3 TNIP2-206ENST00000510267 2006 ntAPPRIS ALT2 TSL 2 BASIC23.8■■□□□ 1.4
DDX53Q86TM3 MLF2-206ENST00000539187 1110 ntAPPRIS P1 TSL 1 (best) BASIC23.8■■□□□ 1.4
DDX53Q86TM3 GALNS-211ENST00000568311 703 ntTSL 1 (best) BASIC23.8■■□□□ 1.4
DDX53Q86TM3 UQCR11-202ENST00000589880 504 ntAPPRIS P1 TSL 3 BASIC23.8■■□□□ 1.4
DDX53Q86TM3 AC092437.1-201ENST00000624794 1048 ntBASIC23.8■■□□□ 1.4
DDX53Q86TM3 ARF1-213ENST00000540651 1972 ntAPPRIS P1 TSL 2 BASIC23.8■■□□□ 1.4
DDX53Q86TM3 SAMD8-202ENST00000372690 1654 ntTSL 1 (best) BASIC23.79■■□□□ 1.4
DDX53Q86TM3 SPATA22-214ENST00000575375 1374 ntAPPRIS P1 TSL 1 (best) BASIC23.79■■□□□ 1.4
DDX53Q86TM3 NAAA-204ENST00000507187 1750 ntTSL 1 (best) BASIC23.79■■□□□ 1.4
DDX53Q86TM3 FKBP8-209ENST00000597960 1781 ntAPPRIS P3 TSL 5 BASIC23.79■■□□□ 1.4
DDX53Q86TM3 AC080013.1-202ENST00000465477 674 ntTSL 5 BASIC23.79■■□□□ 1.4
DDX53Q86TM3 POLR2E-214ENST00000619917 932 ntTSL 5 BASIC23.79■■□□□ 1.4
DDX53Q86TM3 NKIRAS2-204ENST00000393880 1644 ntAPPRIS P1 TSL 2 BASIC23.79■■□□□ 1.4
DDX53Q86TM3 SCN1B-206ENST00000638536 1600 ntAPPRIS P1 TSL 1 (best) BASIC23.79■■□□□ 1.4
DDX53Q86TM3 KIAA2013-201ENST00000376572 2815 ntAPPRIS P1 TSL 1 (best) BASIC23.79■■□□□ 1.4
DDX53Q86TM3 HABP4-202ENST00000375251 2304 ntTSL 1 (best) BASIC23.79■■□□□ 1.4
DDX53Q86TM3 BOP1-205ENST00000569669 2303 ntAPPRIS P1 TSL 1 (best) BASIC23.79■■□□□ 1.4
DDX53Q86TM3 AC142381.3-201ENST00000568208 1670 ntBASIC23.79■■□□□ 1.4
DDX53Q86TM3 AP1S1-201ENST00000337619 1306 ntAPPRIS P1 TSL 1 (best) BASIC23.79■■□□□ 1.4
DDX53Q86TM3 BIN1-201ENST00000259238 2338 ntTSL 1 (best) BASIC23.78■■□□□ 1.4
DDX53Q86TM3 ADAD2-202ENST00000315906 1995 ntAPPRIS ALT2 TSL 1 (best) BASIC23.78■■□□□ 1.4
DDX53Q86TM3 IRF3-207ENST00000593922 1494 ntTSL 1 (best) BASIC23.78■■□□□ 1.4
DDX53Q86TM3 AC012645.1-201ENST00000515455 1650 ntTSL 1 (best) BASIC23.78■■□□□ 1.4
DDX53Q86TM3 OTUD5-208ENST00000610466 2487 ntTSL 5 BASIC23.78■■□□□ 1.4
DDX53Q86TM3 RILP-201ENST00000301336 1771 ntAPPRIS P1 TSL 1 (best) BASIC23.78■■□□□ 1.4
DDX53Q86TM3 LINC02228-203ENST00000641970 1355 ntBASIC23.78■■□□□ 1.4
DDX53Q86TM3 B3GNT4-201ENST00000324189 1642 ntTSL 1 (best) BASIC23.77■■□□□ 1.4
DDX53Q86TM3 CAPG-201ENST00000263867 1442 ntAPPRIS P1 TSL 1 (best) BASIC23.77■■□□□ 1.4
DDX53Q86TM3 AC138932.3-201ENST00000567634 1902 ntBASIC23.77■■□□□ 1.4
DDX53Q86TM3 GADD45G-202ENST00000375769 977 ntTSL 2 BASIC23.77■■□□□ 1.4
DDX53Q86TM3 AC024267.6-201ENST00000580603 583 ntTSL 3 BASIC23.77■■□□□ 1.4
DDX53Q86TM3 TERF1P2-201ENST00000583350 1212 ntBASIC23.77■■□□□ 1.4
DDX53Q86TM3 PDCD5-204ENST00000586035 601 ntTSL 3 BASIC23.77■■□□□ 1.4
DDX53Q86TM3 STK19-201ENST00000375331 1663 ntAPPRIS ALT2 TSL 1 (best) BASIC23.76■■□□□ 1.39
DDX53Q86TM3 GALK1-201ENST00000225614 1445 ntAPPRIS P1 TSL 2 BASIC23.76■■□□□ 1.39
DDX53Q86TM3 DCAF8-211ENST00000475733 1426 ntTSL 1 (best) BASIC23.76■■□□□ 1.39
DDX53Q86TM3 SLC35A2-205ENST00000376529 865 ntTSL 3 BASIC23.76■■□□□ 1.39
DDX53Q86TM3 USF3-203ENST00000491165 2133 ntAPPRIS ALT2 TSL 1 (best) BASIC23.76■■□□□ 1.39
DDX53Q86TM3 TMEM218-207ENST00000528724 1117 ntTSL 5 BASIC23.76■■□□□ 1.39
Retrieved 100 of 98,524 protein–RNA pairs in 24.3 ms