Protein–RNA interactions for Protein: Q7Z7G8

VPS13B, Vacuolar protein sorting-associated protein 13B, humanhuman

Predictions only

Length 4,022 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VPS13BQ7Z7G8 COX4I1-216ENST00000568794 794 ntTSL 5 BASIC13.94□□□□□ -0.18
VPS13BQ7Z7G8 RAB40B-201ENST00000269347 2189 ntTSL 2 BASIC13.94□□□□□ -0.18
VPS13BQ7Z7G8 RAB24-201ENST00000303251 1311 ntAPPRIS P1 TSL 1 (best) BASIC13.94□□□□□ -0.18
VPS13BQ7Z7G8 ZFYVE19-201ENST00000299173 1555 ntAPPRIS ALT2 TSL 1 (best) BASIC13.94□□□□□ -0.18
VPS13BQ7Z7G8 AC064853.3-201ENST00000641801 1658 ntAPPRIS P1 BASIC13.94□□□□□ -0.18
VPS13BQ7Z7G8 STX7-201ENST00000367937 1090 ntTSL 5 BASIC13.93□□□□□ -0.18
VPS13BQ7Z7G8 CDKN2AIPNL-201ENST00000395009 800 ntTSL 1 (best) BASIC13.93□□□□□ -0.18
VPS13BQ7Z7G8 AC093627.4-202ENST00000479592 591 ntTSL 4 BASIC13.93□□□□□ -0.18
VPS13BQ7Z7G8 POLE4-205ENST00000483063 1248 ntAPPRIS P1 TSL 1 (best) BASIC13.93□□□□□ -0.18
VPS13BQ7Z7G8 AP005435.1-201ENST00000529293 1178 ntBASIC13.93□□□□□ -0.18
VPS13BQ7Z7G8 TARDBP-228ENST00000629725 1031 ntTSL 5 BASIC13.93□□□□□ -0.18
VPS13BQ7Z7G8 PPP1R14C-201ENST00000361131 2152 ntAPPRIS P1 TSL 1 (best) BASIC13.93□□□□□ -0.18
VPS13BQ7Z7G8 P2RY2-202ENST00000393596 2174 ntAPPRIS P1 TSL 1 (best) BASIC13.93□□□□□ -0.18
VPS13BQ7Z7G8 E2F5-203ENST00000418930 1890 ntAPPRIS ALT2 TSL 1 (best) BASIC13.93□□□□□ -0.18
VPS13BQ7Z7G8 KCNN1-204ENST00000615435 1691 ntAPPRIS ALT1 TSL 5 BASIC13.93□□□□□ -0.18
VPS13BQ7Z7G8 GGTA1P-203ENST00000481799 1487 ntTSL 1 (best) BASIC13.93□□□□□ -0.18
VPS13BQ7Z7G8 CKLF-205ENST00000417030 628 ntAPPRIS ALT2 TSL 4 BASIC13.93□□□□□ -0.18
VPS13BQ7Z7G8 SNHG12-212ENST00000531126 719 ntTSL 1 (best) BASIC13.93□□□□□ -0.18
VPS13BQ7Z7G8 ADORA2B-201ENST00000304222 1735 ntAPPRIS P1 TSL 1 (best) BASIC13.93□□□□□ -0.18
VPS13BQ7Z7G8 UBTD1-201ENST00000370664 1706 ntAPPRIS P1 TSL 1 (best) BASIC13.93□□□□□ -0.18
VPS13BQ7Z7G8 ZNF451-202ENST00000370702 458 ntTSL 2 BASIC13.93□□□□□ -0.18
VPS13BQ7Z7G8 HAR1A-201ENST00000433161 1882 ntTSL 1 (best) BASIC13.93□□□□□ -0.18
VPS13BQ7Z7G8 TADA2B-204ENST00000512388 1343 ntTSL 5 BASIC13.93□□□□□ -0.18
VPS13BQ7Z7G8 PEX11G-203ENST00000593942 1345 ntTSL 5 BASIC13.93□□□□□ -0.18
VPS13BQ7Z7G8 ABL2-203ENST00000392043 2140 ntTSL 1 (best) BASIC13.93□□□□□ -0.18
VPS13BQ7Z7G8 PLAC9-202ENST00000372267 472 ntAPPRIS ALT2 TSL 3 BASIC13.93□□□□□ -0.18
VPS13BQ7Z7G8 FXYD3-201ENST00000344013 1404 ntTSL 5 BASIC13.92□□□□□ -0.18
VPS13BQ7Z7G8 GTPBP3-202ENST00000358792 1951 ntAPPRIS P4 TSL 2 BASIC13.92□□□□□ -0.18
VPS13BQ7Z7G8 NAGLU-201ENST00000225927 2544 ntAPPRIS P1 TSL 1 (best) BASIC13.92□□□□□ -0.18
VPS13BQ7Z7G8 NREP-202ENST00000379671 2581 ntAPPRIS P1 TSL 1 (best) BASIC13.92□□□□□ -0.18
VPS13BQ7Z7G8 SLC35A3-213ENST00000638988 1286 ntTSL 5 BASIC13.92□□□□□ -0.18
VPS13BQ7Z7G8 NR2F1-AS1-210ENST00000606739 1431 ntTSL 2 BASIC13.92□□□□□ -0.18
VPS13BQ7Z7G8 SNCB-206ENST00000614675 1407 ntTSL 1 (best) BASIC13.92□□□□□ -0.18
VPS13BQ7Z7G8 TANGO2-207ENST00000420290 1859 ntTSL 2 BASIC13.92□□□□□ -0.18
VPS13BQ7Z7G8 C6orf201-202ENST00000380175 1834 ntAPPRIS P1 TSL 1 (best) BASIC13.92□□□□□ -0.18
VPS13BQ7Z7G8 TNIP2-206ENST00000510267 2006 ntAPPRIS ALT2 TSL 2 BASIC13.92□□□□□ -0.18
VPS13BQ7Z7G8 ENTPD5-206ENST00000556242 1437 ntTSL 5 BASIC13.92□□□□□ -0.18
VPS13BQ7Z7G8 HSD17B14-201ENST00000263278 1238 ntAPPRIS P1 TSL 1 (best) BASIC13.92□□□□□ -0.18
VPS13BQ7Z7G8 AC026185.1-201ENST00000445748 174 ntBASIC13.92□□□□□ -0.18
VPS13BQ7Z7G8 MAPK8IP1P2-201ENST00000580257 1472 ntBASIC13.92□□□□□ -0.18
VPS13BQ7Z7G8 RHBDL3-204ENST00000538145 1338 ntAPPRIS ALT2 TSL 1 (best) BASIC13.92□□□□□ -0.18
VPS13BQ7Z7G8 ALG2-203ENST00000476832 1880 ntAPPRIS P1 TSL 1 (best) BASIC13.92□□□□□ -0.18
VPS13BQ7Z7G8 HDGFL2-210ENST00000621835 2255 ntAPPRIS ALT2 TSL 1 (best) BASIC13.92□□□□□ -0.18
VPS13BQ7Z7G8 BIN1-201ENST00000259238 2338 ntTSL 1 (best) BASIC13.92□□□□□ -0.18
VPS13BQ7Z7G8 MIR572-201ENST00000384983 95 ntBASIC13.92□□□□□ -0.18
VPS13BQ7Z7G8 AC145676.1-201ENST00000514988 2004 ntBASIC13.92□□□□□ -0.18
VPS13BQ7Z7G8 SIMC1-204ENST00000430704 1925 ntAPPRIS P3 TSL 2 BASIC13.91□□□□□ -0.18
VPS13BQ7Z7G8 ZNF837-201ENST00000427624 2038 ntAPPRIS P1 TSL 1 (best) BASIC13.91□□□□□ -0.18
VPS13BQ7Z7G8 CDK9-201ENST00000373264 2463 ntAPPRIS P1 TSL 1 (best) BASIC13.91□□□□□ -0.18
VPS13BQ7Z7G8 CDIPT-207ENST00000566113 1671 ntTSL 2 BASIC13.91□□□□□ -0.18
VPS13BQ7Z7G8 OTUD5-201ENST00000156084 2740 ntAPPRIS P3 TSL 1 (best) BASIC13.91□□□□□ -0.18
VPS13BQ7Z7G8 NDUFS3-201ENST00000263774 958 ntAPPRIS P1 TSL 1 (best) BASIC13.91□□□□□ -0.18
VPS13BQ7Z7G8 NINJ1-201ENST00000375446 1281 ntAPPRIS P1 TSL 1 (best) BASIC13.91□□□□□ -0.18
VPS13BQ7Z7G8 IL15RA-208ENST00000397251 1046 ntAPPRIS ALT2 TSL 1 (best) BASIC13.91□□□□□ -0.18
VPS13BQ7Z7G8 ASPSCR1-211ENST00000581647 720 ntTSL 2 BASIC13.91□□□□□ -0.18
VPS13BQ7Z7G8 IL15RA-221ENST00000620865 1037 ntAPPRIS ALT2 TSL 1 (best) BASIC13.91□□□□□ -0.18
VPS13BQ7Z7G8 IL15RA-222ENST00000622442 1160 ntAPPRIS ALT2 TSL 1 (best) BASIC13.91□□□□□ -0.18
VPS13BQ7Z7G8 RILP-201ENST00000301336 1771 ntAPPRIS P1 TSL 1 (best) BASIC13.91□□□□□ -0.18
VPS13BQ7Z7G8 NXNL2-201ENST00000375854 805 ntAPPRIS P1 TSL 5 BASIC13.91□□□□□ -0.18
VPS13BQ7Z7G8 TNFRSF18-202ENST00000379265 705 ntAPPRIS ALT2 TSL 1 (best) BASIC13.91□□□□□ -0.18
VPS13BQ7Z7G8 MOSPD3-202ENST00000379527 1016 ntAPPRIS P1 TSL 5 BASIC13.91□□□□□ -0.18
VPS13BQ7Z7G8 RASGRP2-209ENST00000394429 453 ntTSL 3 BASIC13.91□□□□□ -0.18
VPS13BQ7Z7G8 LTBP3-212ENST00000529189 1997 ntTSL 2 BASIC13.91□□□□□ -0.18
VPS13BQ7Z7G8 AC145207.2-202ENST00000576554 565 ntTSL 5 BASIC13.91□□□□□ -0.18
VPS13BQ7Z7G8 NDUFA6-AS1-207ENST00000595777 833 ntTSL 5 BASIC13.91□□□□□ -0.18
VPS13BQ7Z7G8 AF117829.1-201ENST00000519655 1398 ntTSL 5 BASIC13.91□□□□□ -0.18
VPS13BQ7Z7G8 CBWD2-201ENST00000259199 1812 ntAPPRIS P3 TSL 1 (best) BASIC13.9□□□□□ -0.18
VPS13BQ7Z7G8 ADA-201ENST00000372874 1539 ntAPPRIS P1 TSL 1 (best) BASIC13.9□□□□□ -0.18
VPS13BQ7Z7G8 TUBG1-201ENST00000251413 1611 ntAPPRIS P1 TSL 1 (best) BASIC13.9□□□□□ -0.18
VPS13BQ7Z7G8 DCXR-201ENST00000306869 887 ntAPPRIS P1 TSL 1 (best) BASIC13.9□□□□□ -0.18
VPS13BQ7Z7G8 PIGP-203ENST00000399098 972 ntTSL 1 (best) BASIC13.9□□□□□ -0.18
VPS13BQ7Z7G8 SLC25A29-212ENST00000555927 960 ntTSL 2 BASIC13.9□□□□□ -0.18
VPS13BQ7Z7G8 RNF114-202ENST00000622920 1284 ntTSL 5 BASIC13.9□□□□□ -0.18
VPS13BQ7Z7G8 WWOX-218ENST00000627394 894 ntTSL 5 BASIC13.9□□□□□ -0.18
VPS13BQ7Z7G8 RING1-201ENST00000374656 1752 ntAPPRIS P1 TSL 1 (best) BASIC13.9□□□□□ -0.18
VPS13BQ7Z7G8 ACAD8-202ENST00000374752 1797 ntTSL 2 BASIC13.9□□□□□ -0.18
VPS13BQ7Z7G8 AC073343.2-201ENST00000413182 548 ntTSL 4 BASIC13.9□□□□□ -0.18
VPS13BQ7Z7G8 PRKCQ-AS1-202ENST00000445427 1133 ntTSL 1 (best) BASIC13.9□□□□□ -0.18
VPS13BQ7Z7G8 TSKS-202ENST00000358830 1367 ntAPPRIS ALT2 TSL 1 (best) BASIC13.9□□□□□ -0.18
VPS13BQ7Z7G8 CAPZB-203ENST00000375142 1686 ntAPPRIS ALT1 TSL 5 BASIC13.9□□□□□ -0.18
VPS13BQ7Z7G8 PTOV1-201ENST00000391842 1875 ntAPPRIS P1 TSL 5 BASIC13.9□□□□□ -0.18
VPS13BQ7Z7G8 AC016769.1-201ENST00000409132 1010 ntBASIC13.9□□□□□ -0.18
VPS13BQ7Z7G8 AC142086.2-201ENST00000569753 217 ntBASIC13.9□□□□□ -0.18
VPS13BQ7Z7G8 ORAI3-204ENST00000566237 1393 ntTSL 5 BASIC13.9□□□□□ -0.18
VPS13BQ7Z7G8 ST3GAL4-213ENST00000530591 1459 ntAPPRIS P3 TSL 1 (best) BASIC13.9□□□□□ -0.18
VPS13BQ7Z7G8 BBC3-202ENST00000341983 1538 ntTSL 1 (best) BASIC13.9□□□□□ -0.18
VPS13BQ7Z7G8 ADSSL1-202ENST00000332972 1969 ntTSL 1 (best) BASIC13.89□□□□□ -0.19
VPS13BQ7Z7G8 HNRNPAB-201ENST00000355836 1602 ntAPPRIS ALT2 TSL 1 (best) BASIC13.89□□□□□ -0.19
VPS13BQ7Z7G8 VSX1-201ENST00000376707 943 ntTSL 1 (best) BASIC13.89□□□□□ -0.19
VPS13BQ7Z7G8 MLLT10-204ENST00000377091 905 ntTSL 1 (best) BASIC13.89□□□□□ -0.19
VPS13BQ7Z7G8 AKT1S1-203ENST00000391831 2025 ntAPPRIS P1 TSL 2 BASIC13.89□□□□□ -0.19
VPS13BQ7Z7G8 POLR2J-202ENST00000393794 784 ntTSL 1 (best) BASIC13.89□□□□□ -0.19
VPS13BQ7Z7G8 HSCB-202ENST00000398941 955 ntTSL 2 BASIC13.89□□□□□ -0.19
VPS13BQ7Z7G8 GAS2L1-201ENST00000406549 1803 ntTSL 1 (best) BASIC13.89□□□□□ -0.19
VPS13BQ7Z7G8 VSX1-206ENST00000444511 1197 ntTSL 1 (best) BASIC13.89□□□□□ -0.19
VPS13BQ7Z7G8 RAP1B-207ENST00000450214 1466 ntTSL 2 BASIC13.89□□□□□ -0.19
VPS13BQ7Z7G8 TSPY20P-201ENST00000450910 630 ntBASIC13.89□□□□□ -0.19
VPS13BQ7Z7G8 METTL21A-210ENST00000458426 1366 ntTSL 1 (best) BASIC13.89□□□□□ -0.19
VPS13BQ7Z7G8 AL499627.2-201ENST00000606283 725 ntBASIC13.89□□□□□ -0.19
VPS13BQ7Z7G8 CFAP99-207ENST00000635017 2298 ntTSL 5 BASIC13.89□□□□□ -0.19
Retrieved 100 of 98,524 protein–RNA pairs in 16.7 ms