Protein–RNA interactions for Protein: Q71DI3

HIST2H3A, Histone H3.2, humanhuman

Predictions only

Length 136 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HIST2H3AQ71DI3 TSPY11P-201ENST00000442607 1045 ntBASIC19.57■□□□□ 0.72
HIST2H3AQ71DI3 AL117209.1-201ENST00000560931 828 ntTSL 3 BASIC19.57■□□□□ 0.72
HIST2H3AQ71DI3 LHX2-201ENST00000373615 2554 ntAPPRIS P1 TSL 1 (best) BASIC19.57■□□□□ 0.72
HIST2H3AQ71DI3 SLC2A8-203ENST00000373371 2172 ntAPPRIS P1 TSL 1 (best) BASIC19.57■□□□□ 0.72
HIST2H3AQ71DI3 KLHL36-201ENST00000258157 1974 ntTSL 1 (best) BASIC19.57■□□□□ 0.72
HIST2H3AQ71DI3 SYNDIG1-201ENST00000376862 2522 ntAPPRIS P1 TSL 1 (best) BASIC19.56■□□□□ 0.72
HIST2H3AQ71DI3 SPINT2-201ENST00000301244 1802 ntAPPRIS P2 TSL 1 (best) BASIC19.56■□□□□ 0.72
HIST2H3AQ71DI3 PFKFB4-202ENST00000383734 1491 ntTSL 1 (best) BASIC19.56■□□□□ 0.72
HIST2H3AQ71DI3 HMGA2-203ENST00000393578 1993 ntAPPRIS ALT1 TSL 1 (best) BASIC19.56■□□□□ 0.72
HIST2H3AQ71DI3 GRK4-206ENST00000504933 1971 ntTSL 1 (best) BASIC19.56■□□□□ 0.72
HIST2H3AQ71DI3 CPOX-201ENST00000264193 2825 ntAPPRIS P1 TSL 1 (best) BASIC19.56■□□□□ 0.72
HIST2H3AQ71DI3 TST-201ENST00000249042 1211 ntAPPRIS P1 TSL 1 (best) BASIC19.56■□□□□ 0.72
HIST2H3AQ71DI3 AC073111.5-204ENST00000498682 1167 ntAPPRIS P1 TSL 2 BASIC19.56■□□□□ 0.72
HIST2H3AQ71DI3 AC092343.1-201ENST00000500224 729 ntTSL 3 BASIC19.56■□□□□ 0.72
HIST2H3AQ71DI3 AKT1S1-204ENST00000391832 1911 ntAPPRIS P1 TSL 1 (best) BASIC19.56■□□□□ 0.72
HIST2H3AQ71DI3 FPGS-204ENST00000393706 2230 ntTSL 2 BASIC19.56■□□□□ 0.72
HIST2H3AQ71DI3 UBAP1L-203ENST00000559089 1694 ntAPPRIS P1 TSL 1 (best) BASIC19.56■□□□□ 0.72
HIST2H3AQ71DI3 NFKBID-201ENST00000396901 1834 ntAPPRIS P2 TSL 1 (best) BASIC19.55■□□□□ 0.72
HIST2H3AQ71DI3 NFKBID-211ENST00000641389 1834 ntAPPRIS ALT2 BASIC19.55■□□□□ 0.72
HIST2H3AQ71DI3 BLOC1S4-201ENST00000320776 1617 ntAPPRIS P1 BASIC19.55■□□□□ 0.72
HIST2H3AQ71DI3 TMEM230-205ENST00000379279 1636 ntAPPRIS P1 TSL 2 BASIC19.55■□□□□ 0.72
HIST2H3AQ71DI3 BFSP1-202ENST00000377873 2207 ntAPPRIS P1 TSL 1 (best) BASIC19.55■□□□□ 0.72
HIST2H3AQ71DI3 RAX-201ENST00000256852 2935 ntTSL 1 (best) BASIC19.55■□□□□ 0.72
HIST2H3AQ71DI3 MAGED2-206ENST00000375068 2189 ntAPPRIS P2 TSL 1 (best) BASIC19.55■□□□□ 0.72
HIST2H3AQ71DI3 ZDHHC20-203ENST00000400590 1869 ntAPPRIS ALT2 TSL 5 BASIC19.55■□□□□ 0.72
HIST2H3AQ71DI3 HSD11B1L-203ENST00000342970 1620 ntTSL 1 (best) BASIC19.54■□□□□ 0.72
HIST2H3AQ71DI3 AC009102.2-201ENST00000606772 1639 ntBASIC19.54■□□□□ 0.72
HIST2H3AQ71DI3 SPOCK3-222ENST00000512681 1457 ntTSL 2 BASIC19.54■□□□□ 0.72
HIST2H3AQ71DI3 SLC39A14-202ENST00000289952 2137 ntAPPRIS ALT2 TSL 2 BASIC19.54■□□□□ 0.72
HIST2H3AQ71DI3 ASPSCR1-201ENST00000306729 2123 ntAPPRIS ALT2 TSL 2 BASIC19.54■□□□□ 0.72
HIST2H3AQ71DI3 RPL13-202ENST00000393099 2385 ntAPPRIS P1 TSL 1 (best) BASIC19.54■□□□□ 0.72
HIST2H3AQ71DI3 ASB1-202ENST00000409297 878 ntTSL 5 BASIC19.54■□□□□ 0.72
HIST2H3AQ71DI3 CHTF8-205ENST00000519520 856 ntTSL 2 BASIC19.54■□□□□ 0.72
HIST2H3AQ71DI3 ZEB1-AS1-205ENST00000605946 382 ntTSL 5 BASIC19.54■□□□□ 0.72
HIST2H3AQ71DI3 MIR6724-1-201ENST00000616420 92 ntBASIC19.54■□□□□ 0.72
HIST2H3AQ71DI3 MIR6724-2-201ENST00000616483 92 ntBASIC19.54■□□□□ 0.72
HIST2H3AQ71DI3 MIR6724-4-201ENST00000617390 92 ntBASIC19.54■□□□□ 0.72
HIST2H3AQ71DI3 MIR6724-3-201ENST00000622482 92 ntBASIC19.54■□□□□ 0.72
HIST2H3AQ71DI3 STK32C-201ENST00000298630 2086 ntAPPRIS P1 TSL 1 (best) BASIC19.54■□□□□ 0.72
HIST2H3AQ71DI3 KCNQ4-204ENST00000509682 1926 ntAPPRIS ALT2 TSL 5 BASIC19.54■□□□□ 0.72
HIST2H3AQ71DI3 APBB3-204ENST00000358580 2020 ntTSL 5 BASIC19.54■□□□□ 0.72
HIST2H3AQ71DI3 SNRNP70-201ENST00000221448 1603 ntTSL 2 BASIC19.54■□□□□ 0.72
HIST2H3AQ71DI3 IL15RA-204ENST00000379977 1626 ntAPPRIS P3 TSL 1 (best) BASIC19.54■□□□□ 0.72
HIST2H3AQ71DI3 DTNB-201ENST00000288642 2464 ntAPPRIS ALT2 TSL 2 BASIC19.53■□□□□ 0.72
HIST2H3AQ71DI3 EN1-201ENST00000295206 2457 ntAPPRIS P1 TSL 2 BASIC19.53■□□□□ 0.72
HIST2H3AQ71DI3 DTNB-208ENST00000406818 2474 ntAPPRIS P4 TSL 1 (best) BASIC19.53■□□□□ 0.72
HIST2H3AQ71DI3 FNDC11-204ENST00000615526 2954 ntAPPRIS P1 BASIC19.53■□□□□ 0.72
HIST2H3AQ71DI3 CBWD2-203ENST00000416503 1665 ntAPPRIS ALT2 TSL 1 (best) BASIC19.53■□□□□ 0.72
HIST2H3AQ71DI3 NEURL4-202ENST00000399464 5200 ntAPPRIS P4 TSL 1 (best) BASIC19.53■□□□□ 0.72
HIST2H3AQ71DI3 ASCC1-204ENST00000394915 1510 ntTSL 5 BASIC19.53■□□□□ 0.72
HIST2H3AQ71DI3 AC105935.1-201ENST00000424174 422 ntTSL 3 BASIC19.53■□□□□ 0.72
HIST2H3AQ71DI3 TSPAN17-204ENST00000503045 1019 ntTSL 5 BASIC19.53■□□□□ 0.72
HIST2H3AQ71DI3 TIE1-210ENST00000538015 1140 ntTSL 1 (best) BASIC19.53■□□□□ 0.72
HIST2H3AQ71DI3 MAL2-204ENST00000614891 2818 ntAPPRIS P1 TSL 1 (best) BASIC19.53■□□□□ 0.72
HIST2H3AQ71DI3 MIR222HG-201ENST00000602461 1379 ntTSL 5 BASIC19.53■□□□□ 0.72
HIST2H3AQ71DI3 RBM4B-203ENST00000525754 2339 ntAPPRIS P1 TSL 2 BASIC19.53■□□□□ 0.72
HIST2H3AQ71DI3 AMZ2-219ENST00000612294 1498 ntAPPRIS P1 TSL 1 (best) BASIC19.53■□□□□ 0.72
HIST2H3AQ71DI3 HNRNPAB-208ENST00000515193 1595 ntAPPRIS ALT2 TSL 5 BASIC19.53■□□□□ 0.72
HIST2H3AQ71DI3 CLDN5-201ENST00000403084 2357 ntBASIC19.52■□□□□ 0.72
HIST2H3AQ71DI3 JAGN1-201ENST00000307768 1693 ntAPPRIS P1 TSL 1 (best) BASIC19.52■□□□□ 0.72
HIST2H3AQ71DI3 CBWD1-203ENST00000377400 1792 ntAPPRIS P1 TSL 1 (best) BASIC19.52■□□□□ 0.72
HIST2H3AQ71DI3 ASPSCR1-208ENST00000580534 1776 ntTSL 2 BASIC19.52■□□□□ 0.72
HIST2H3AQ71DI3 ECE2-202ENST00000357474 2667 ntTSL 1 (best) BASIC19.52■□□□□ 0.72
HIST2H3AQ71DI3 OPN3-201ENST00000366554 2620 ntAPPRIS P1 TSL 1 (best) BASIC19.52■□□□□ 0.72
HIST2H3AQ71DI3 SLC39A4-202ENST00000301305 2174 ntAPPRIS P1 TSL 1 (best) BASIC19.52■□□□□ 0.72
HIST2H3AQ71DI3 ST3GAL4-202ENST00000356132 1745 ntTSL 5 BASIC19.52■□□□□ 0.72
HIST2H3AQ71DI3 LINC01529-204ENST00000636474 1715 ntBASIC19.52■□□□□ 0.72
HIST2H3AQ71DI3 ZNF76-203ENST00000373953 2716 ntAPPRIS P1 TSL 1 (best) BASIC19.52■□□□□ 0.72
HIST2H3AQ71DI3 ST8SIA6-201ENST00000377602 2276 ntAPPRIS P1 TSL 1 (best) BASIC19.52■□□□□ 0.72
HIST2H3AQ71DI3 ZNF302-211ENST00000509528 577 ntTSL 4 BASIC19.52■□□□□ 0.72
HIST2H3AQ71DI3 NAA30-202ENST00000554703 795 ntTSL 1 (best) BASIC19.52■□□□□ 0.72
HIST2H3AQ71DI3 ANKRD28-201ENST00000399451 6564 ntAPPRIS P1 TSL 1 (best) BASIC19.52■□□□□ 0.72
HIST2H3AQ71DI3 CAMK2N2-201ENST00000296238 1362 ntAPPRIS P1 TSL 1 (best) BASIC19.52■□□□□ 0.72
HIST2H3AQ71DI3 UTS2R-201ENST00000313135 1357 ntAPPRIS P1 BASIC19.52■□□□□ 0.72
HIST2H3AQ71DI3 DONSON-202ENST00000303113 2028 ntTSL 5 BASIC19.52■□□□□ 0.72
HIST2H3AQ71DI3 EEF1D-203ENST00000419152 1452 ntAPPRIS ALT2 TSL 5 BASIC19.52■□□□□ 0.72
HIST2H3AQ71DI3 GALC-202ENST00000393568 2054 ntTSL 2 BASIC19.52■□□□□ 0.71
HIST2H3AQ71DI3 ZNF668-205ENST00000426488 2282 ntTSL 5 BASIC19.51■□□□□ 0.71
HIST2H3AQ71DI3 PACRGL-201ENST00000295290 1937 ntTSL 5 BASIC19.51■□□□□ 0.71
HIST2H3AQ71DI3 USF3-203ENST00000491165 2133 ntAPPRIS ALT2 TSL 1 (best) BASIC19.51■□□□□ 0.71
HIST2H3AQ71DI3 GUSBP5-201ENST00000418136 578 ntBASIC19.51■□□□□ 0.71
HIST2H3AQ71DI3 EPDR1-202ENST00000423717 638 ntTSL 1 (best) BASIC19.51■□□□□ 0.71
HIST2H3AQ71DI3 PRELID1-203ENST00000503216 1171 ntTSL 1 (best) BASIC19.51■□□□□ 0.71
HIST2H3AQ71DI3 DUX4L4-201ENST00000566884 1269 ntBASIC19.51■□□□□ 0.71
HIST2H3AQ71DI3 ANXA8-204ENST00000583911 1874 ntTSL 2 BASIC19.51■□□□□ 0.71
HIST2H3AQ71DI3 SLC25A5-AS1-202ENST00000445759 1616 ntTSL 1 (best) BASIC19.51■□□□□ 0.71
HIST2H3AQ71DI3 CCDC85B-201ENST00000312579 1524 ntAPPRIS P1 BASIC19.51■□□□□ 0.71
HIST2H3AQ71DI3 TATDN2-201ENST00000287652 5342 ntAPPRIS P1 TSL 1 (best) BASIC19.5■□□□□ 0.71
HIST2H3AQ71DI3 AL353743.1-201ENST00000637846 1769 ntTSL 5 BASIC19.5■□□□□ 0.71
HIST2H3AQ71DI3 NRXN2-204ENST00000377559 6413 ntAPPRIS ALT2 TSL 1 (best) BASIC19.5■□□□□ 0.71
HIST2H3AQ71DI3 TMEM54-201ENST00000329151 871 ntTSL 1 (best) BASIC19.5■□□□□ 0.71
HIST2H3AQ71DI3 KISS1-201ENST00000367194 709 ntAPPRIS P2 TSL 1 (best) BASIC19.5■□□□□ 0.71
HIST2H3AQ71DI3 SDHAP1-204ENST00000427415 559 ntTSL 4 BASIC19.5■□□□□ 0.71
HIST2H3AQ71DI3 C14orf80-211ENST00000450383 1107 ntAPPRIS ALT2 TSL 5 BASIC19.5■□□□□ 0.71
HIST2H3AQ71DI3 SLC16A10-206ENST00000612036 1231 ntTSL 5 BASIC19.5■□□□□ 0.71
HIST2H3AQ71DI3 AKT1-201ENST00000349310 2866 ntAPPRIS P1 TSL 1 (best) BASIC19.5■□□□□ 0.71
HIST2H3AQ71DI3 RGS6-209ENST00000553525 2005 ntAPPRIS ALT1 TSL 2 BASIC19.5■□□□□ 0.71
HIST2H3AQ71DI3 ARL6IP4-201ENST00000315580 1644 ntAPPRIS P3 TSL 1 (best) BASIC19.5■□□□□ 0.71
HIST2H3AQ71DI3 TANGO2-201ENST00000327374 2273 ntAPPRIS P1 TSL 1 (best) BASIC19.5■□□□□ 0.71
HIST2H3AQ71DI3 NIPSNAP2-205ENST00000446778 1882 ntTSL 2 BASIC19.5■□□□□ 0.71
Retrieved 100 of 98,524 protein–RNA pairs in 23.2 ms