Protein–RNA interactions for Protein: Q6ZS62

COLCA1, Colorectal cancer-associated protein 1, humanhuman

Predictions only

Length 124 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
COLCA1Q6ZS62 PKIB-204ENST00000368448 1561 ntAPPRIS P1 TSL 5 BASIC19.27■□□□□ 0.67
COLCA1Q6ZS62 ADAM22-209ENST00000439864 2576 ntTSL 1 (best) BASIC19.27■□□□□ 0.67
COLCA1Q6ZS62 ARHGAP27-207ENST00000528273 2319 ntTSL 1 (best) BASIC19.26■□□□□ 0.67
COLCA1Q6ZS62 CCNG2-201ENST00000316355 5526 ntAPPRIS P1 TSL 1 (best) BASIC19.26■□□□□ 0.67
COLCA1Q6ZS62 GFRA4-201ENST00000290417 1427 ntAPPRIS ALT2 TSL 1 (best) BASIC19.26■□□□□ 0.67
COLCA1Q6ZS62 KCNQ4-204ENST00000509682 1926 ntAPPRIS ALT2 TSL 5 BASIC19.26■□□□□ 0.67
COLCA1Q6ZS62 PSPH-201ENST00000275605 2131 ntAPPRIS P1 TSL 1 (best) BASIC19.26■□□□□ 0.67
COLCA1Q6ZS62 ASPSCR1-201ENST00000306729 2123 ntAPPRIS ALT2 TSL 2 BASIC19.26■□□□□ 0.67
COLCA1Q6ZS62 CLPSL2-202ENST00000403376 405 ntAPPRIS P3 TSL 1 (best) BASIC19.26■□□□□ 0.67
COLCA1Q6ZS62 AL117336.3-202ENST00000605499 489 ntTSL 3 BASIC19.26■□□□□ 0.67
COLCA1Q6ZS62 AC133561.1-201ENST00000568600 2415 ntBASIC19.26■□□□□ 0.67
COLCA1Q6ZS62 C1QTNF4-201ENST00000302514 1664 ntAPPRIS P1 TSL 1 (best) BASIC19.26■□□□□ 0.67
COLCA1Q6ZS62 SLC52A2-211ENST00000532887 2147 ntAPPRIS P1 TSL 5 BASIC19.25■□□□□ 0.67
COLCA1Q6ZS62 SLC2A8-203ENST00000373371 2172 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
COLCA1Q6ZS62 PEX7-201ENST00000318471 1464 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
COLCA1Q6ZS62 DNAJC4-202ENST00000321685 1288 ntAPPRIS P3 TSL 1 (best) BASIC19.25■□□□□ 0.67
COLCA1Q6ZS62 MIR17HG-201ENST00000400282 931 ntTSL 1 (best) BASIC19.25■□□□□ 0.67
COLCA1Q6ZS62 SUMF1-205ENST00000458465 1102 ntTSL 2 BASIC19.25■□□□□ 0.67
COLCA1Q6ZS62 DNAJC4-212ENST00000628077 938 ntTSL 5 BASIC19.25■□□□□ 0.67
COLCA1Q6ZS62 SLC39A14-202ENST00000289952 2137 ntAPPRIS ALT2 TSL 2 BASIC19.25■□□□□ 0.67
COLCA1Q6ZS62 AC011498.4-201ENST00000586020 1803 ntAPPRIS P1 TSL 2 BASIC19.25■□□□□ 0.67
COLCA1Q6ZS62 PTGES2-202ENST00000338961 2331 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
COLCA1Q6ZS62 IDH2-202ENST00000540499 1453 ntTSL 2 BASIC19.24■□□□□ 0.67
COLCA1Q6ZS62 OAS3-205ENST00000548514 1392 ntTSL 2 BASIC19.24■□□□□ 0.67
COLCA1Q6ZS62 CPOX-201ENST00000264193 2825 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
COLCA1Q6ZS62 RASSF1-AS1-201ENST00000629828 790 ntBASIC19.24■□□□□ 0.67
COLCA1Q6ZS62 RNASEH2B-201ENST00000336617 1629 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
COLCA1Q6ZS62 ATP5G2-208ENST00000552242 1950 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
COLCA1Q6ZS62 IQCD-203ENST00000546692 1872 ntTSL 5 BASIC19.24■□□□□ 0.67
COLCA1Q6ZS62 CACNB1-203ENST00000394310 1753 ntAPPRIS ALT1 TSL 1 (best) BASIC19.24■□□□□ 0.67
COLCA1Q6ZS62 CORO1A-201ENST00000219150 1803 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
COLCA1Q6ZS62 METTL21A-210ENST00000458426 1366 ntTSL 1 (best) BASIC19.23■□□□□ 0.67
COLCA1Q6ZS62 PCMTD2-202ENST00000299468 1049 ntTSL 5 BASIC19.23■□□□□ 0.67
COLCA1Q6ZS62 CDKN2A-207ENST00000497750 565 ntTSL 4 BASIC19.23■□□□□ 0.67
COLCA1Q6ZS62 TMEM218-209ENST00000529583 848 ntAPPRIS P1 TSL 3 BASIC19.23■□□□□ 0.67
COLCA1Q6ZS62 ZNRF1-205ENST00000566250 1069 ntTSL 1 (best) BASIC19.23■□□□□ 0.67
COLCA1Q6ZS62 ZNRF1-206ENST00000567962 1234 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
COLCA1Q6ZS62 CDKN2A-212ENST00000578845 678 ntTSL 2 BASIC19.23■□□□□ 0.67
COLCA1Q6ZS62 AL512631.2-201ENST00000604634 923 ntBASIC19.23■□□□□ 0.67
COLCA1Q6ZS62 NAE1-204ENST00000394074 1654 ntTSL 5 BASIC19.23■□□□□ 0.67
COLCA1Q6ZS62 TGIF1-206ENST00000405385 1689 ntTSL 2 BASIC19.23■□□□□ 0.67
COLCA1Q6ZS62 RASSF5-202ENST00000579436 2064 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
COLCA1Q6ZS62 TANGO2-201ENST00000327374 2273 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
COLCA1Q6ZS62 ZNF668-205ENST00000426488 2282 ntTSL 5 BASIC19.22■□□□□ 0.67
COLCA1Q6ZS62 CLDN5-203ENST00000413119 1760 ntTSL 2 BASIC19.22■□□□□ 0.67
COLCA1Q6ZS62 CLYBL-202ENST00000376354 1127 ntTSL 5 BASIC19.22■□□□□ 0.67
COLCA1Q6ZS62 MOSPD3-204ENST00000424091 1115 ntTSL 1 (best) BASIC19.22■□□□□ 0.67
COLCA1Q6ZS62 QDPR-206ENST00000508623 601 ntTSL 3 BASIC19.22■□□□□ 0.67
COLCA1Q6ZS62 PABPN1-207ENST00000556821 1220 ntTSL 2 BASIC19.22■□□□□ 0.67
COLCA1Q6ZS62 AC241377.3-202ENST00000626088 1088 ntBASIC19.22■□□□□ 0.67
COLCA1Q6ZS62 AC241585.3-202ENST00000628937 1088 ntBASIC19.22■□□□□ 0.67
COLCA1Q6ZS62 AC245100.8-202ENST00000629247 1058 ntBASIC19.22■□□□□ 0.67
COLCA1Q6ZS62 BFSP1-202ENST00000377873 2207 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
COLCA1Q6ZS62 OLIG1-201ENST00000382348 2277 ntAPPRIS P1 BASIC19.22■□□□□ 0.67
COLCA1Q6ZS62 RGS6-209ENST00000553525 2005 ntAPPRIS ALT1 TSL 2 BASIC19.22■□□□□ 0.67
COLCA1Q6ZS62 RBM4B-203ENST00000525754 2339 ntAPPRIS P1 TSL 2 BASIC19.22■□□□□ 0.67
COLCA1Q6ZS62 SLC35A2-210ENST00000616181 1614 ntTSL 2 BASIC19.22■□□□□ 0.67
COLCA1Q6ZS62 ADSS-201ENST00000366535 2780 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
COLCA1Q6ZS62 RCE1-202ENST00000524506 1379 ntTSL 5 BASIC19.21■□□□□ 0.67
COLCA1Q6ZS62 MAL2-204ENST00000614891 2818 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
COLCA1Q6ZS62 MADCAM1-205ENST00000613880 1509 ntAPPRIS ALT2 TSL 5 BASIC19.21■□□□□ 0.67
COLCA1Q6ZS62 ZNF76-203ENST00000373953 2716 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
COLCA1Q6ZS62 AKT1-201ENST00000349310 2866 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
COLCA1Q6ZS62 DONSON-202ENST00000303113 2028 ntTSL 5 BASIC19.21■□□□□ 0.67
COLCA1Q6ZS62 APBB3-204ENST00000358580 2020 ntTSL 5 BASIC19.21■□□□□ 0.67
COLCA1Q6ZS62 MAGED2-206ENST00000375068 2189 ntAPPRIS P2 TSL 1 (best) BASIC19.21■□□□□ 0.67
COLCA1Q6ZS62 SYT6-209ENST00000610222 1707 ntAPPRIS P1 TSL 5 BASIC19.21■□□□□ 0.67
COLCA1Q6ZS62 AC009086.3-201ENST00000623486 1008 ntBASIC19.21■□□□□ 0.67
COLCA1Q6ZS62 ST3GAL5-268ENST00000640982 2465 ntAPPRIS ALT2 TSL 5 BASIC19.21■□□□□ 0.67
COLCA1Q6ZS62 RBM42-203ENST00000588161 1609 ntAPPRIS ALT1 TSL 1 (best) BASIC19.21■□□□□ 0.67
COLCA1Q6ZS62 GLRX3-201ENST00000331244 1302 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
COLCA1Q6ZS62 FNTA-208ENST00000529687 1950 ntTSL 2 BASIC19.21■□□□□ 0.67
COLCA1Q6ZS62 GATM-206ENST00000558336 1522 ntTSL 2 BASIC19.2■□□□□ 0.66
COLCA1Q6ZS62 PICK1-202ENST00000404072 2164 ntAPPRIS P1 TSL 2 BASIC19.2■□□□□ 0.66
COLCA1Q6ZS62 ECE2-202ENST00000357474 2667 ntTSL 1 (best) BASIC19.2■□□□□ 0.66
COLCA1Q6ZS62 CCDC7-201ENST00000277657 1899 ntAPPRIS P2 TSL 1 (best) BASIC19.2■□□□□ 0.66
COLCA1Q6ZS62 COG8-201ENST00000562081 1731 ntAPPRIS P1 TSL 5 BASIC19.2■□□□□ 0.66
COLCA1Q6ZS62 VGLL2-201ENST00000326274 2212 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
COLCA1Q6ZS62 SIMC1-204ENST00000430704 1925 ntAPPRIS P3 TSL 2 BASIC19.2■□□□□ 0.66
COLCA1Q6ZS62 PCP4L1-201ENST00000504449 1424 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
COLCA1Q6ZS62 ST8SIA6-201ENST00000377602 2276 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
COLCA1Q6ZS62 C1orf229-201ENST00000623686 2258 ntBASIC19.2■□□□□ 0.66
COLCA1Q6ZS62 FAM173A-201ENST00000219535 806 ntAPPRIS ALT2 TSL 2 BASIC19.2■□□□□ 0.66
COLCA1Q6ZS62 PRELID2-201ENST00000334744 2140 ntTSL 2 BASIC19.2■□□□□ 0.66
COLCA1Q6ZS62 AC019163.1-201ENST00000512634 610 ntTSL 2 BASIC19.2■□□□□ 0.66
COLCA1Q6ZS62 AC090241.2-201ENST00000602329 432 ntTSL 4 BASIC19.2■□□□□ 0.66
COLCA1Q6ZS62 ZDHHC16-203ENST00000353979 1647 ntTSL 1 (best) BASIC19.2■□□□□ 0.66
COLCA1Q6ZS62 LACTBL1-201ENST00000426928 1641 ntAPPRIS P5 TSL 5 BASIC19.2■□□□□ 0.66
COLCA1Q6ZS62 SH3RF3-AS1-201ENST00000567491 1604 ntBASIC19.2■□□□□ 0.66
COLCA1Q6ZS62 GLT8D2-205ENST00000548660 1835 ntAPPRIS P1 TSL 2 BASIC19.2■□□□□ 0.66
COLCA1Q6ZS62 GALC-202ENST00000393568 2054 ntTSL 2 BASIC19.2■□□□□ 0.66
COLCA1Q6ZS62 TADA2B-201ENST00000310074 4350 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
COLCA1Q6ZS62 ACAD8-202ENST00000374752 1797 ntTSL 2 BASIC19.19■□□□□ 0.66
COLCA1Q6ZS62 NRG2-201ENST00000289409 2535 ntAPPRIS ALT2 TSL 5 BASIC19.19■□□□□ 0.66
COLCA1Q6ZS62 HNRNPAB-201ENST00000355836 1602 ntAPPRIS ALT2 TSL 1 (best) BASIC19.19■□□□□ 0.66
COLCA1Q6ZS62 YIF1A-201ENST00000359461 943 ntTSL 2 BASIC19.19■□□□□ 0.66
COLCA1Q6ZS62 NAXE-201ENST00000368233 1012 ntTSL 2 BASIC19.19■□□□□ 0.66
COLCA1Q6ZS62 SURF2-201ENST00000371964 842 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
COLCA1Q6ZS62 YIF1A-203ENST00000376901 1124 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
COLCA1Q6ZS62 U2AF1-202ENST00000380276 940 ntAPPRIS ALT2 TSL 1 (best) BASIC19.19■□□□□ 0.66
Retrieved 100 of 98,524 protein–RNA pairs in 138.7 ms