Protein–RNA interactions for Protein: Q6ZNA4

RNF111, E3 ubiquitin-protein ligase Arkadia, humanhuman

Predictions only

Length 994 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RNF111Q6ZNA4 CAPNS1-207ENST00000589146 578 ntTSL 3 BASIC21.63■■□□□ 1.05
RNF111Q6ZNA4 H2AFB1-201ENST00000620016 587 ntAPPRIS P1 BASIC21.63■■□□□ 1.05
RNF111Q6ZNA4 LAT-217ENST00000630764 610 ntAPPRIS ALT2 TSL 5 BASIC21.63■■□□□ 1.05
RNF111Q6ZNA4 LIMD2-205ENST00000578402 1534 ntAPPRIS P1 TSL 1 (best) BASIC21.63■■□□□ 1.05
RNF111Q6ZNA4 MSL1-203ENST00000577454 2081 ntTSL 2 BASIC21.63■■□□□ 1.05
RNF111Q6ZNA4 PAQR4-201ENST00000293978 2644 ntTSL 2 BASIC21.63■■□□□ 1.05
RNF111Q6ZNA4 DMPK-220ENST00000618091 2503 ntTSL 1 (best) BASIC21.63■■□□□ 1.05
RNF111Q6ZNA4 FAM20C-201ENST00000313766 2751 ntAPPRIS P1 TSL 1 (best) BASIC21.63■■□□□ 1.05
RNF111Q6ZNA4 PSPH-202ENST00000395471 2178 ntAPPRIS P1 TSL 1 (best) BASIC21.63■■□□□ 1.05
RNF111Q6ZNA4 NEUROG3-201ENST00000242462 1376 ntAPPRIS P1 TSL 1 (best) BASIC21.62■■□□□ 1.05
RNF111Q6ZNA4 ZDHHC5-204ENST00000527985 2817 ntTSL 1 (best) BASIC21.62■■□□□ 1.05
RNF111Q6ZNA4 WFDC1-201ENST00000219454 1534 ntAPPRIS P1 TSL 1 (best) BASIC21.62■■□□□ 1.05
RNF111Q6ZNA4 BX664725.1-201ENST00000438252 379 ntBASIC21.62■■□□□ 1.05
RNF111Q6ZNA4 DXO-201ENST00000337523 1628 ntAPPRIS P1 TSL 1 (best) BASIC21.62■■□□□ 1.05
RNF111Q6ZNA4 ZYX-201ENST00000322764 2493 ntAPPRIS P2 TSL 1 (best) BASIC21.62■■□□□ 1.05
RNF111Q6ZNA4 NAAA-204ENST00000507187 1750 ntTSL 1 (best) BASIC21.61■■□□□ 1.05
RNF111Q6ZNA4 LINC01925-201ENST00000579492 500 ntTSL 5 BASIC21.61■■□□□ 1.05
RNF111Q6ZNA4 AC138207.2-201ENST00000583377 492 ntTSL 2 BASIC21.61■■□□□ 1.05
RNF111Q6ZNA4 AC137630.3-201ENST00000607245 391 ntBASIC21.61■■□□□ 1.05
RNF111Q6ZNA4 AL035685.1-201ENST00000636663 812 ntBASIC21.61■■□□□ 1.05
RNF111Q6ZNA4 RNF39-202ENST00000376751 1970 ntTSL 1 (best) BASIC21.61■■□□□ 1.05
RNF111Q6ZNA4 RILP-201ENST00000301336 1771 ntAPPRIS P1 TSL 1 (best) BASIC21.61■■□□□ 1.05
RNF111Q6ZNA4 VDAC2-203ENST00000332211 1557 ntAPPRIS P1 TSL 1 (best) BASIC21.61■■□□□ 1.05
RNF111Q6ZNA4 PON2-202ENST00000433091 1726 ntTSL 1 (best) BASIC21.6■■□□□ 1.05
RNF111Q6ZNA4 MDK-203ENST00000395566 828 ntAPPRIS P2 TSL 1 (best) BASIC21.6■■□□□ 1.05
RNF111Q6ZNA4 LSM7-204ENST00000587502 575 ntTSL 1 (best) BASIC21.6■■□□□ 1.05
RNF111Q6ZNA4 SERINC5-203ENST00000509193 1441 ntTSL 1 (best) BASIC21.6■■□□□ 1.05
RNF111Q6ZNA4 COMT-203ENST00000403184 2217 ntTSL 2 BASIC21.6■■□□□ 1.05
RNF111Q6ZNA4 SEPT2-205ENST00000401990 1734 ntTSL 1 (best) BASIC21.6■■□□□ 1.05
RNF111Q6ZNA4 SMARCB1-201ENST00000263121 1690 ntAPPRIS P3 TSL 1 (best) BASIC21.6■■□□□ 1.05
RNF111Q6ZNA4 FAM136A-201ENST00000037869 1810 ntAPPRIS P1 TSL 1 (best) BASIC21.59■■□□□ 1.05
RNF111Q6ZNA4 ACVRL1-201ENST00000388922 1971 ntAPPRIS P1 TSL 1 (best) BASIC21.59■■□□□ 1.05
RNF111Q6ZNA4 CNN3-202ENST00000394202 1974 ntTSL 2 BASIC21.59■■□□□ 1.05
RNF111Q6ZNA4 NFS1-204ENST00000397425 1956 ntTSL 5 BASIC21.59■■□□□ 1.05
RNF111Q6ZNA4 EVA1B-201ENST00000270824 1054 ntAPPRIS P1 TSL 2 BASIC21.59■■□□□ 1.05
RNF111Q6ZNA4 VSTM2L-201ENST00000373459 831 ntTSL 3 BASIC21.59■■□□□ 1.05
RNF111Q6ZNA4 SELENOO-201ENST00000380903 2315 ntAPPRIS P2 TSL 1 (best) BASIC21.59■■□□□ 1.05
RNF111Q6ZNA4 RAB6B-203ENST00000469959 500 ntTSL 3 BASIC21.59■■□□□ 1.05
RNF111Q6ZNA4 MIR663AHG-227ENST00000608084 765 ntTSL 5 BASIC21.59■■□□□ 1.05
RNF111Q6ZNA4 SELENOO-203ENST00000611222 2311 ntAPPRIS ALT2 TSL 5 BASIC21.59■■□□□ 1.05
RNF111Q6ZNA4 DTNB-207ENST00000405222 2273 ntTSL 1 (best) BASIC21.59■■□□□ 1.05
RNF111Q6ZNA4 GRK4-206ENST00000504933 1971 ntTSL 1 (best) BASIC21.59■■□□□ 1.05
RNF111Q6ZNA4 MEF2A-207ENST00000558812 2186 ntTSL 2 BASIC21.58■■□□□ 1.05
RNF111Q6ZNA4 TEX22-201ENST00000451127 2571 ntAPPRIS P1 TSL 2 BASIC21.58■■□□□ 1.05
RNF111Q6ZNA4 AC243965.2-201ENST00000612576 2671 ntTSL 5 BASIC21.58■■□□□ 1.05
RNF111Q6ZNA4 SMAD1-201ENST00000302085 1966 ntAPPRIS P1 TSL 1 (best) BASIC21.58■■□□□ 1.05
RNF111Q6ZNA4 AC092807.3-205ENST00000467666 531 ntTSL 3 BASIC21.58■■□□□ 1.05
RNF111Q6ZNA4 KRT125P-201ENST00000546827 989 ntBASIC21.58■■□□□ 1.05
RNF111Q6ZNA4 Z92544.1-202ENST00000571933 1220 ntBASIC21.58■■□□□ 1.05
RNF111Q6ZNA4 EFS-202ENST00000351354 2704 ntTSL 1 (best) BASIC21.58■■□□□ 1.05
RNF111Q6ZNA4 CNPY3-201ENST00000372836 1704 ntAPPRIS P1 TSL 1 (best) BASIC21.58■■□□□ 1.04
RNF111Q6ZNA4 HSPBP1-202ENST00000433386 1572 ntAPPRIS P1 TSL 1 (best) BASIC21.57■■□□□ 1.04
RNF111Q6ZNA4 AF131216.4-201ENST00000638924 1588 ntBASIC21.57■■□□□ 1.04
RNF111Q6ZNA4 CBLN3-201ENST00000267406 2346 ntAPPRIS P1 TSL 1 (best) BASIC21.57■■□□□ 1.04
RNF111Q6ZNA4 RNPEP-201ENST00000295640 2427 ntAPPRIS P1 TSL 1 (best) BASIC21.57■■□□□ 1.04
RNF111Q6ZNA4 DCTD-201ENST00000357067 1931 ntTSL 1 (best) BASIC21.57■■□□□ 1.04
RNF111Q6ZNA4 SPHK1-201ENST00000323374 2138 ntTSL 1 (best) BASIC21.57■■□□□ 1.04
RNF111Q6ZNA4 ZFAND5-202ENST00000343431 1073 ntAPPRIS P1 TSL 5 BASIC21.57■■□□□ 1.04
RNF111Q6ZNA4 LRRC1-201ENST00000370882 808 ntTSL 3 BASIC21.57■■□□□ 1.04
RNF111Q6ZNA4 EBPL-205ENST00000378284 967 ntTSL 1 (best) BASIC21.57■■□□□ 1.04
RNF111Q6ZNA4 MPP5-205ENST00000556345 1163 ntTSL 2 BASIC21.57■■□□□ 1.04
RNF111Q6ZNA4 C14orf80-204ENST00000392522 1630 ntAPPRIS P4 TSL 5 BASIC21.57■■□□□ 1.04
RNF111Q6ZNA4 TFAP2A-202ENST00000379608 2576 ntAPPRIS ALT1 TSL 1 (best) BASIC21.57■■□□□ 1.04
RNF111Q6ZNA4 EBF4-202ENST00000380648 2910 ntAPPRIS P2 TSL 5 BASIC21.57■■□□□ 1.04
RNF111Q6ZNA4 GATA4-207ENST00000532059 1459 ntAPPRIS ALT1 TSL 1 (best) BASIC21.57■■□□□ 1.04
RNF111Q6ZNA4 CBWD2-201ENST00000259199 1812 ntAPPRIS P3 TSL 1 (best) BASIC21.57■■□□□ 1.04
RNF111Q6ZNA4 AC005906.2-202ENST00000638821 2168 ntTSL 5 BASIC21.57■■□□□ 1.04
RNF111Q6ZNA4 PKIG-206ENST00000372892 1338 ntAPPRIS P1 TSL 2 BASIC21.56■■□□□ 1.04
RNF111Q6ZNA4 DRAM2-201ENST00000286692 2246 ntAPPRIS P1 TSL 1 (best) BASIC21.56■■□□□ 1.04
RNF111Q6ZNA4 C18orf8-214ENST00000615148 1958 ntTSL 5 BASIC21.56■■□□□ 1.04
RNF111Q6ZNA4 CACNG6-203ENST00000352529 1635 ntTSL 5 BASIC21.56■■□□□ 1.04
RNF111Q6ZNA4 SMUG1-203ENST00000401977 1082 ntAPPRIS P1 TSL 5 BASIC21.56■■□□□ 1.04
RNF111Q6ZNA4 AC092849.1-201ENST00000475250 303 ntTSL 4 BASIC21.56■■□□□ 1.04
RNF111Q6ZNA4 HOXC-AS1-201ENST00000505700 548 ntTSL 2 BASIC21.56■■□□□ 1.04
RNF111Q6ZNA4 KCNIP2-207ENST00000358038 2489 ntAPPRIS ALT1 TSL 1 (best) BASIC21.56■■□□□ 1.04
RNF111Q6ZNA4 KCNQ4-204ENST00000509682 1926 ntAPPRIS ALT2 TSL 5 BASIC21.56■■□□□ 1.04
RNF111Q6ZNA4 C16orf72-201ENST00000327827 5953 ntAPPRIS P1 TSL 1 (best) BASIC21.56■■□□□ 1.04
RNF111Q6ZNA4 CSNK1G3-207ENST00000512718 1569 ntTSL 2 BASIC21.56■■□□□ 1.04
RNF111Q6ZNA4 OAF-201ENST00000328965 2525 ntAPPRIS P2 TSL 1 (best) BASIC21.56■■□□□ 1.04
RNF111Q6ZNA4 ZNF428-201ENST00000300811 1412 ntAPPRIS P1 TSL 1 (best) BASIC21.55■■□□□ 1.04
RNF111Q6ZNA4 RNF149-201ENST00000295317 2458 ntAPPRIS P1 TSL 1 (best) BASIC21.55■■□□□ 1.04
RNF111Q6ZNA4 DIXDC1-205ENST00000529225 1945 ntTSL 5 BASIC21.55■■□□□ 1.04
RNF111Q6ZNA4 HSPE1-201ENST00000233893 950 ntAPPRIS P1 TSL 1 (best) BASIC21.55■■□□□ 1.04
RNF111Q6ZNA4 CD63-202ENST00000420846 981 ntAPPRIS P1 TSL 5 BASIC21.55■■□□□ 1.04
RNF111Q6ZNA4 AC239859.2-201ENST00000444165 318 ntBASIC21.55■■□□□ 1.04
RNF111Q6ZNA4 AC026785.2-201ENST00000511821 867 ntTSL 2 BASIC21.55■■□□□ 1.04
RNF111Q6ZNA4 CTDSP2-203ENST00000547701 988 ntTSL 1 (best) BASIC21.55■■□□□ 1.04
RNF111Q6ZNA4 OSCAR-205ENST00000359649 1892 ntAPPRIS P4 TSL 2 BASIC21.55■■□□□ 1.04
RNF111Q6ZNA4 MAP7D1-201ENST00000316156 3456 ntAPPRIS ALT2 TSL 1 (best) BASIC21.55■■□□□ 1.04
RNF111Q6ZNA4 H19-210ENST00000439725 1929 ntTSL 2 BASIC21.55■■□□□ 1.04
RNF111Q6ZNA4 ARHGEF25-201ENST00000286494 2552 ntTSL 1 (best) BASIC21.54■■□□□ 1.04
RNF111Q6ZNA4 MTCH2-201ENST00000302503 2587 ntAPPRIS P1 TSL 1 (best) BASIC21.54■■□□□ 1.04
RNF111Q6ZNA4 ADCK2-203ENST00000476491 2092 ntTSL 1 (best) BASIC21.54■■□□□ 1.04
RNF111Q6ZNA4 SRPK3-203ENST00000370104 1753 ntAPPRIS ALT2 TSL 1 (best) BASIC21.54■■□□□ 1.04
RNF111Q6ZNA4 DHRS11-215ENST00000618403 1598 ntAPPRIS P1 TSL 1 (best) BASIC21.54■■□□□ 1.04
RNF111Q6ZNA4 ZNF180-205ENST00000587047 525 ntTSL 4 BASIC21.54■■□□□ 1.04
RNF111Q6ZNA4 PRMT5-228ENST00000627278 129 ntTSL 5 BASIC21.54■■□□□ 1.04
RNF111Q6ZNA4 AC242852.2-201ENST00000615738 1807 ntBASIC21.54■■□□□ 1.04
RNF111Q6ZNA4 LMF1-202ENST00000543238 2103 ntTSL 2 BASIC21.53■■□□□ 1.04
RNF111Q6ZNA4 DYRK1B-204ENST00000593685 2724 ntAPPRIS P3 TSL 5 BASIC21.53■■□□□ 1.04
Retrieved 100 of 98,524 protein–RNA pairs in 9.3 ms