Protein–RNA interactions for Protein: Q5TC12

ATPAF1, ATP synthase mitochondrial F1 complex assembly factor 1, humanhuman

Predicted RBP Predictions only

Length 328 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ATPAF1Q5TC12 ECEL1P1-201ENST00000373592 1742 ntBASIC19.25■□□□□ 0.67
ATPAF1Q5TC12 GUSB-201ENST00000304895 2300 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
ATPAF1Q5TC12 FOXJ1-201ENST00000322957 2641 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
ATPAF1Q5TC12 EPS8L1-202ENST00000245618 2198 ntTSL 1 (best) BASIC19.25■□□□□ 0.67
ATPAF1Q5TC12 WWC2-AS2-201ENST00000578387 2183 ntBASIC19.25■□□□□ 0.67
ATPAF1Q5TC12 GAL3ST1-202ENST00000401975 1791 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
ATPAF1Q5TC12 HSPBP1-202ENST00000433386 1572 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
ATPAF1Q5TC12 CD37-213ENST00000598095 1598 ntTSL 2 BASIC19.25■□□□□ 0.67
ATPAF1Q5TC12 SNHG12-212ENST00000531126 719 ntTSL 1 (best) BASIC19.25■□□□□ 0.67
ATPAF1Q5TC12 CACNA1B-201ENST00000277549 7158 ntAPPRIS ALT2 TSL 1 (best) BASIC19.25■□□□□ 0.67
ATPAF1Q5TC12 CACNA1B-202ENST00000277551 7158 ntAPPRIS ALT2 TSL 5 BASIC19.25■□□□□ 0.67
ATPAF1Q5TC12 CACNG6-203ENST00000352529 1635 ntTSL 5 BASIC19.25■□□□□ 0.67
ATPAF1Q5TC12 ALDH16A1-202ENST00000455361 2470 ntTSL 2 BASIC19.25■□□□□ 0.67
ATPAF1Q5TC12 FAM107A-203ENST00000447756 1432 ntTSL 1 (best) BASIC19.25■□□□□ 0.67
ATPAF1Q5TC12 PHF2-201ENST00000359246 5569 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
ATPAF1Q5TC12 LETM1-201ENST00000302787 5462 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
ATPAF1Q5TC12 BSN-AS2-201ENST00000421598 2603 ntTSL 2 BASIC19.24■□□□□ 0.67
ATPAF1Q5TC12 CDIPT-207ENST00000566113 1671 ntTSL 2 BASIC19.24■□□□□ 0.67
ATPAF1Q5TC12 ZNF213-208ENST00000576416 2240 ntAPPRIS P1 TSL 2 BASIC19.24■□□□□ 0.67
ATPAF1Q5TC12 DNM2-205ENST00000585892 2774 ntTSL 1 (best) BASIC19.24■□□□□ 0.67
ATPAF1Q5TC12 FARP2-223ENST00000627550 2122 ntTSL 2 BASIC19.24■□□□□ 0.67
ATPAF1Q5TC12 CBWD2-201ENST00000259199 1812 ntAPPRIS P3 TSL 1 (best) BASIC19.24■□□□□ 0.67
ATPAF1Q5TC12 NKX2-8-201ENST00000258829 1261 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
ATPAF1Q5TC12 HMX3-201ENST00000357878 1173 ntAPPRIS P1 TSL 2 BASIC19.24■□□□□ 0.67
ATPAF1Q5TC12 CENPX-202ENST00000392359 805 ntAPPRIS P1 TSL 2 BASIC19.24■□□□□ 0.67
ATPAF1Q5TC12 SMUG1-203ENST00000401977 1082 ntAPPRIS P1 TSL 5 BASIC19.24■□□□□ 0.67
ATPAF1Q5TC12 AC239859.2-201ENST00000444165 318 ntBASIC19.24■□□□□ 0.67
ATPAF1Q5TC12 RAB6B-203ENST00000469959 500 ntTSL 3 BASIC19.24■□□□□ 0.67
ATPAF1Q5TC12 AC138207.2-201ENST00000583377 492 ntTSL 2 BASIC19.24■□□□□ 0.67
ATPAF1Q5TC12 ZNF180-205ENST00000587047 525 ntTSL 4 BASIC19.24■□□□□ 0.67
ATPAF1Q5TC12 AC131274.2-201ENST00000580697 1507 ntBASIC19.24■□□□□ 0.67
ATPAF1Q5TC12 TIGD5-201ENST00000504548 5390 ntAPPRIS P1 BASIC19.24■□□□□ 0.67
ATPAF1Q5TC12 PKIG-206ENST00000372892 1338 ntAPPRIS P1 TSL 2 BASIC19.24■□□□□ 0.67
ATPAF1Q5TC12 SLC35A2-201ENST00000247138 1672 ntAPPRIS P3 TSL 1 (best) BASIC19.24■□□□□ 0.67
ATPAF1Q5TC12 BCS1L-210ENST00000431802 2015 ntAPPRIS P1 TSL 2 BASIC19.24■□□□□ 0.67
ATPAF1Q5TC12 ZNF174-202ENST00000344823 1557 ntTSL 1 (best) BASIC19.23■□□□□ 0.67
ATPAF1Q5TC12 SPON2-222ENST00000617421 2156 ntAPPRIS P1 TSL 5 BASIC19.23■□□□□ 0.67
ATPAF1Q5TC12 IKBKG-211ENST00000615874 1460 ntTSL 5 BASIC19.23■□□□□ 0.67
ATPAF1Q5TC12 IKBKG-215ENST00000619941 1463 ntTSL 5 BASIC19.23■□□□□ 0.67
ATPAF1Q5TC12 CPSF4-204ENST00000436336 1738 ntAPPRIS ALT1 TSL 1 (best) BASIC19.23■□□□□ 0.67
ATPAF1Q5TC12 ARID1B-220ENST00000636930 8246 ntAPPRIS ALT2 TSL 2 BASIC19.23■□□□□ 0.67
ATPAF1Q5TC12 HSPE1-201ENST00000233893 950 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
ATPAF1Q5TC12 RPL31-208ENST00000409733 825 ntAPPRIS P3 TSL 1 (best) BASIC19.23■□□□□ 0.67
ATPAF1Q5TC12 MCRIP1-202ENST00000457257 942 ntTSL 3 BASIC19.23■□□□□ 0.67
ATPAF1Q5TC12 LSM7-203ENST00000585409 512 ntTSL 2 BASIC19.23■□□□□ 0.67
ATPAF1Q5TC12 TLX1-203ENST00000467928 1838 ntTSL 1 (best) BASIC19.23■□□□□ 0.67
ATPAF1Q5TC12 C5orf49-201ENST00000399810 2385 ntAPPRIS P2 TSL 1 (best) BASIC19.22■□□□□ 0.67
ATPAF1Q5TC12 LYRM1-201ENST00000219168 1626 ntAPPRIS P1 TSL 2 BASIC19.22■□□□□ 0.67
ATPAF1Q5TC12 USP36-218ENST00000590546 1771 ntTSL 1 (best) BASIC19.22■□□□□ 0.67
ATPAF1Q5TC12 NR5A1-204ENST00000620110 2975 ntTSL 5 BASIC19.22■□□□□ 0.67
ATPAF1Q5TC12 RNF4-207ENST00000506706 2098 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
ATPAF1Q5TC12 HES6-204ENST00000409182 863 ntTSL 2 BASIC19.22■□□□□ 0.67
ATPAF1Q5TC12 SENP5-202ENST00000419026 973 ntTSL 3 BASIC19.22■□□□□ 0.67
ATPAF1Q5TC12 FAM72B-203ENST00000452190 748 ntTSL 3 BASIC19.22■□□□□ 0.67
ATPAF1Q5TC12 AC004448.1-201ENST00000458332 883 ntBASIC19.22■□□□□ 0.67
ATPAF1Q5TC12 UBXN2A-202ENST00000404924 1557 ntAPPRIS P1 TSL 2 BASIC19.22■□□□□ 0.67
ATPAF1Q5TC12 TPM4-201ENST00000300933 2666 ntTSL 1 (best) BASIC19.22■□□□□ 0.67
ATPAF1Q5TC12 PON2-202ENST00000433091 1726 ntTSL 1 (best) BASIC19.22■□□□□ 0.67
ATPAF1Q5TC12 EID2B-201ENST00000326282 1865 ntAPPRIS P1 BASIC19.22■□□□□ 0.67
ATPAF1Q5TC12 AL024507.2-201ENST00000606070 2574 ntBASIC19.22■□□□□ 0.67
ATPAF1Q5TC12 RGS6-209ENST00000553525 2005 ntAPPRIS ALT1 TSL 2 BASIC19.22■□□□□ 0.67
ATPAF1Q5TC12 AC007375.3-201ENST00000600936 2314 ntBASIC19.22■□□□□ 0.67
ATPAF1Q5TC12 DXO-201ENST00000337523 1628 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
ATPAF1Q5TC12 NKIRAS2-206ENST00000393885 1909 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
ATPAF1Q5TC12 PDLIM2-203ENST00000339162 2226 ntTSL 1 (best) BASIC19.21■□□□□ 0.67
ATPAF1Q5TC12 ITPKC-201ENST00000263370 3385 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
ATPAF1Q5TC12 INPPL1-201ENST00000298229 4733 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
ATPAF1Q5TC12 AC096541.1-201ENST00000445070 1807 ntTSL 2 BASIC19.21■□□□□ 0.67
ATPAF1Q5TC12 PPP5C-201ENST00000012443 2109 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
ATPAF1Q5TC12 ASB6-201ENST00000277458 2330 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
ATPAF1Q5TC12 LRRC24-202ENST00000533758 1701 ntAPPRIS ALT2 TSL 5 BASIC19.21■□□□□ 0.67
ATPAF1Q5TC12 CAPNS1-207ENST00000589146 578 ntTSL 3 BASIC19.21■□□□□ 0.67
ATPAF1Q5TC12 MIR4787-201ENST00000607364 84 ntBASIC19.21■□□□□ 0.67
ATPAF1Q5TC12 AC092028.1-203ENST00000608262 953 ntBASIC19.21■□□□□ 0.67
ATPAF1Q5TC12 DISC1-223ENST00000628350 2363 ntAPPRIS ALT2 TSL 1 (best) BASIC19.21■□□□□ 0.67
ATPAF1Q5TC12 SMG7-AS1-201ENST00000421703 2220 ntTSL 1 (best) BASIC19.21■□□□□ 0.67
ATPAF1Q5TC12 STK32C-201ENST00000298630 2086 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
ATPAF1Q5TC12 CSNK1G2-201ENST00000255641 2918 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
ATPAF1Q5TC12 TEAD1-206ENST00000527636 2544 ntAPPRIS ALT2 TSL 1 (best) BASIC19.2■□□□□ 0.66
ATPAF1Q5TC12 OSCAR-205ENST00000359649 1892 ntAPPRIS P4 TSL 2 BASIC19.2■□□□□ 0.66
ATPAF1Q5TC12 TANGO2-207ENST00000420290 1859 ntTSL 2 BASIC19.2■□□□□ 0.66
ATPAF1Q5TC12 TRIM72-202ENST00000613872 1573 ntTSL 1 (best) BASIC19.2■□□□□ 0.66
ATPAF1Q5TC12 OSCAR-201ENST00000284648 2055 ntAPPRIS ALT2 TSL 1 (best) BASIC19.2■□□□□ 0.66
ATPAF1Q5TC12 FLOT1-201ENST00000376389 1912 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
ATPAF1Q5TC12 ADSSL1-201ENST00000330877 1766 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
ATPAF1Q5TC12 IGFBP7-203ENST00000514062 1251 ntAPPRIS ALT2 TSL 2 BASIC19.2■□□□□ 0.66
ATPAF1Q5TC12 HOMER3-204ENST00000539827 1979 ntAPPRIS P3 TSL 1 (best) BASIC19.2■□□□□ 0.66
ATPAF1Q5TC12 RALB-201ENST00000272519 2344 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
ATPAF1Q5TC12 SEPT8-207ENST00000378719 2889 ntTSL 1 (best) BASIC19.2■□□□□ 0.66
ATPAF1Q5TC12 LMLN-210ENST00000482695 2010 ntAPPRIS ALT2 TSL 1 (best) BASIC19.2■□□□□ 0.66
ATPAF1Q5TC12 CELF5-201ENST00000292672 1854 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
ATPAF1Q5TC12 RUFY1-201ENST00000319449 2646 ntAPPRIS P3 TSL 1 (best) BASIC19.2■□□□□ 0.66
ATPAF1Q5TC12 RCN2-201ENST00000320963 1750 ntTSL 5 BASIC19.19■□□□□ 0.66
ATPAF1Q5TC12 NAAA-204ENST00000507187 1750 ntTSL 1 (best) BASIC19.19■□□□□ 0.66
ATPAF1Q5TC12 AC109460.3-201ENST00000569969 5296 ntTSL 2 BASIC19.19■□□□□ 0.66
ATPAF1Q5TC12 AC090587.2-201ENST00000430222 527 ntTSL 2 BASIC19.19■□□□□ 0.66
ATPAF1Q5TC12 OR2A1-AS1-204ENST00000470435 602 ntBASIC19.19■□□□□ 0.66
ATPAF1Q5TC12 TMEM170A-206ENST00000569276 609 ntTSL 2 BASIC19.19■□□□□ 0.66
ATPAF1Q5TC12 TRIR-205ENST00000592273 783 ntTSL 3 BASIC19.19■□□□□ 0.66
ATPAF1Q5TC12 SNX5-217ENST00000606557 1087 ntBASIC19.19■□□□□ 0.66
Retrieved 100 of 98,524 protein–RNA pairs in 15.9 ms