Protein–RNA interactions for Protein: Q5ST30

VARS2, Valine--tRNA ligase, mitochondrial, humanhuman

Known RBP Predictions only

Length 1,063 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VARS2Q5ST30 CHSY1-201ENST00000254190 4550 ntAPPRIS P1 TSL 1 (best) BASIC23.78■■□□□ 1.4
VARS2Q5ST30 HOMER2-201ENST00000304231 1990 ntAPPRIS P4 TSL 5 BASIC23.78■■□□□ 1.4
VARS2Q5ST30 RCN2-202ENST00000394883 1366 ntTSL 5 BASIC23.78■■□□□ 1.4
VARS2Q5ST30 ENTPD4-201ENST00000356206 2097 ntTSL 1 (best) BASIC23.77■■□□□ 1.4
VARS2Q5ST30 ENTPD4-203ENST00000417069 2063 ntAPPRIS P1 TSL 1 (best) BASIC23.77■■□□□ 1.4
VARS2Q5ST30 JTB-203ENST00000368589 1216 ntTSL 2 BASIC23.77■■□□□ 1.4
VARS2Q5ST30 HES3-201ENST00000377898 697 ntAPPRIS P1 TSL 2 BASIC23.77■■□□□ 1.4
VARS2Q5ST30 FAM222B-208ENST00000581381 556 ntTSL 4 BASIC23.77■■□□□ 1.4
VARS2Q5ST30 IQCJ-SCHIP1-203ENST00000476809 1780 ntAPPRIS ALT2 TSL 5 BASIC23.77■■□□□ 1.4
VARS2Q5ST30 HEXDC-202ENST00000337014 2285 ntTSL 1 (best) BASIC23.77■■□□□ 1.4
VARS2Q5ST30 FAM53B-201ENST00000280780 1568 ntTSL 1 (best) BASIC23.77■■□□□ 1.4
VARS2Q5ST30 DISC1-220ENST00000602873 1553 ntAPPRIS ALT2 TSL 1 (best) BASIC23.77■■□□□ 1.4
VARS2Q5ST30 LAYN-209ENST00000533265 1703 ntTSL 5 BASIC23.76■■□□□ 1.39
VARS2Q5ST30 PYCARD-201ENST00000247470 990 ntAPPRIS P1 TSL 1 (best) BASIC23.76■■□□□ 1.39
VARS2Q5ST30 LRRC73-201ENST00000372441 2121 ntAPPRIS P1 TSL 1 (best) BASIC23.76■■□□□ 1.39
VARS2Q5ST30 CEP104-201ENST00000378223 1121 ntTSL 1 (best) BASIC23.76■■□□□ 1.39
VARS2Q5ST30 PRELID2-204ENST00000505416 738 ntAPPRIS P2 TSL 3 BASIC23.76■■□□□ 1.39
VARS2Q5ST30 SLC39A3-203ENST00000545664 1219 ntTSL 2 BASIC23.76■■□□□ 1.39
VARS2Q5ST30 AIPL1-206ENST00000571740 1202 ntAPPRIS ALT2 TSL 1 (best) BASIC23.76■■□□□ 1.39
VARS2Q5ST30 ANKRD20A6P-201ENST00000618763 204 ntBASIC23.76■■□□□ 1.39
VARS2Q5ST30 NIPSNAP2-205ENST00000446778 1882 ntTSL 2 BASIC23.76■■□□□ 1.39
VARS2Q5ST30 TSPY26P-201ENST00000476365 1326 ntBASIC23.76■■□□□ 1.39
VARS2Q5ST30 KISS1R-201ENST00000234371 1625 ntAPPRIS P1 TSL 1 (best) BASIC23.76■■□□□ 1.39
VARS2Q5ST30 SLC25A5-AS1-202ENST00000445759 1616 ntTSL 1 (best) BASIC23.76■■□□□ 1.39
VARS2Q5ST30 CCM2L-201ENST00000262659 2523 ntAPPRIS P1 TSL 1 (best) BASIC23.75■■□□□ 1.39
VARS2Q5ST30 SPRED3-204ENST00000587013 1539 ntTSL 5 BASIC23.75■■□□□ 1.39
VARS2Q5ST30 KCNIP2-206ENST00000356640 1989 ntTSL 1 (best) BASIC23.75■■□□□ 1.39
VARS2Q5ST30 UBE2E2-203ENST00000425792 1248 ntAPPRIS P1 TSL 2 BASIC23.75■■□□□ 1.39
VARS2Q5ST30 AC116614.1-201ENST00000456949 539 ntTSL 2 BASIC23.75■■□□□ 1.39
VARS2Q5ST30 ORAI3-202ENST00000562699 628 ntTSL 2 BASIC23.75■■□□□ 1.39
VARS2Q5ST30 MADCAM1-208ENST00000621286 1203 ntAPPRIS ALT2 TSL 5 BASIC23.75■■□□□ 1.39
VARS2Q5ST30 LRRC24-201ENST00000529415 1758 ntAPPRIS P2 TSL 1 (best) BASIC23.75■■□□□ 1.39
VARS2Q5ST30 HSPBP1-206ENST00000587922 1449 ntAPPRIS P1 TSL 1 (best) BASIC23.75■■□□□ 1.39
VARS2Q5ST30 LRRC34-206ENST00000522526 1899 ntAPPRIS P3 TSL 1 (best) BASIC23.75■■□□□ 1.39
VARS2Q5ST30 PON2-217ENST00000633192 1876 ntTSL 1 (best) BASIC23.75■■□□□ 1.39
VARS2Q5ST30 SDC3-202ENST00000339394 1580 ntAPPRIS P1 TSL 1 (best) BASIC23.74■■□□□ 1.39
VARS2Q5ST30 ZNF767P-202ENST00000472212 2100 ntTSL 1 (best) BASIC23.74■■□□□ 1.39
VARS2Q5ST30 KCNIP1-203ENST00000390656 2249 ntTSL 5 BASIC23.74■■□□□ 1.39
VARS2Q5ST30 ZEB1-AS1-201ENST00000423714 456 ntTSL 3 BASIC23.74■■□□□ 1.39
VARS2Q5ST30 MED14OS-201ENST00000456333 900 ntAPPRIS P1 TSL 1 (best) BASIC23.74■■□□□ 1.39
VARS2Q5ST30 MLF2-206ENST00000539187 1110 ntAPPRIS P1 TSL 1 (best) BASIC23.74■■□□□ 1.39
VARS2Q5ST30 AC010525.1-201ENST00000585559 441 ntBASIC23.74■■□□□ 1.39
VARS2Q5ST30 AC011446.1-201ENST00000591825 458 ntTSL 2 BASIC23.74■■□□□ 1.39
VARS2Q5ST30 AC087623.3-201ENST00000607047 1098 ntBASIC23.74■■□□□ 1.39
VARS2Q5ST30 ITM2C-203ENST00000335005 1889 ntTSL 1 (best) BASIC23.74■■□□□ 1.39
VARS2Q5ST30 P2RX4-211ENST00000543171 1777 ntTSL 5 BASIC23.73■■□□□ 1.39
VARS2Q5ST30 HACD3-205ENST00000562901 1797 ntTSL 5 BASIC23.73■■□□□ 1.39
VARS2Q5ST30 TBC1D22A-202ENST00000355704 1886 ntTSL 1 (best) BASIC23.73■■□□□ 1.39
VARS2Q5ST30 OR2I1P-207ENST00000453522 948 ntBASIC23.73■■□□□ 1.39
VARS2Q5ST30 ATP6V0B-204ENST00000471859 865 ntTSL 5 BASIC23.73■■□□□ 1.39
VARS2Q5ST30 AICDA-202ENST00000537228 667 ntTSL 5 BASIC23.73■■□□□ 1.39
VARS2Q5ST30 STARD3NL-202ENST00000396013 1365 ntAPPRIS P1 TSL 5 BASIC23.73■■□□□ 1.39
VARS2Q5ST30 OTUD5-203ENST00000396743 2682 ntAPPRIS ALT1 TSL 1 (best) BASIC23.73■■□□□ 1.39
VARS2Q5ST30 IRF3-201ENST00000309877 1691 ntAPPRIS P1 TSL 1 (best) BASIC23.73■■□□□ 1.39
VARS2Q5ST30 PLD4-205ENST00000553861 667 ntTSL 2 BASIC23.72■■□□□ 1.39
VARS2Q5ST30 AC006538.2-201ENST00000586572 543 ntAPPRIS P1 TSL 4 BASIC23.72■■□□□ 1.39
VARS2Q5ST30 TSKS-202ENST00000358830 1367 ntAPPRIS ALT2 TSL 1 (best) BASIC23.72■■□□□ 1.39
VARS2Q5ST30 NKIRAS2-204ENST00000393880 1644 ntAPPRIS P1 TSL 2 BASIC23.72■■□□□ 1.39
VARS2Q5ST30 MMP21-201ENST00000368808 1919 ntAPPRIS P1 TSL 1 (best) BASIC23.72■■□□□ 1.39
VARS2Q5ST30 ABCB10P4-201ENST00000566803 2184 ntBASIC23.71■■□□□ 1.39
VARS2Q5ST30 KCNN1-204ENST00000615435 1691 ntAPPRIS ALT1 TSL 5 BASIC23.71■■□□□ 1.39
VARS2Q5ST30 PHF10-202ENST00000366780 1589 ntAPPRIS ALT2 TSL 5 BASIC23.71■■□□□ 1.39
VARS2Q5ST30 AURKAIP1-204ENST00000378853 875 ntAPPRIS P1 TSL 2 BASIC23.71■■□□□ 1.39
VARS2Q5ST30 GLI3-203ENST00000437480 451 ntTSL 2 BASIC23.71■■□□□ 1.39
VARS2Q5ST30 IGHV3-19-201ENST00000521488 291 ntBASIC23.71■■□□□ 1.39
VARS2Q5ST30 AC010203.1-202ENST00000550096 695 ntTSL 3 BASIC23.71■■□□□ 1.39
VARS2Q5ST30 HOMER3-206ENST00000594439 982 ntTSL 1 (best) BASIC23.71■■□□□ 1.39
VARS2Q5ST30 AC010999.2-201ENST00000621974 596 ntTSL 2 BASIC23.71■■□□□ 1.39
VARS2Q5ST30 RPIA-201ENST00000283646 1848 ntAPPRIS P1 TSL 1 (best) BASIC23.7■■□□□ 1.39
VARS2Q5ST30 AC011498.4-201ENST00000586020 1803 ntAPPRIS P1 TSL 2 BASIC23.7■■□□□ 1.39
VARS2Q5ST30 SIRT7-201ENST00000328666 1743 ntAPPRIS P1 TSL 1 (best) BASIC23.7■■□□□ 1.39
VARS2Q5ST30 MESP2-201ENST00000341735 1552 ntAPPRIS P1 TSL 1 (best) BASIC23.7■■□□□ 1.38
VARS2Q5ST30 NABP2-202ENST00000341463 1411 ntAPPRIS P1 TSL 3 BASIC23.7■■□□□ 1.38
VARS2Q5ST30 RPL8-201ENST00000262584 1041 ntAPPRIS P1 TSL 1 (best) BASIC23.7■■□□□ 1.38
VARS2Q5ST30 MYD88-205ENST00000424893 1279 ntAPPRIS ALT2 TSL 1 (best) BASIC23.7■■□□□ 1.38
VARS2Q5ST30 AP003419.1-201ENST00000535922 470 ntTSL 3 BASIC23.7■■□□□ 1.38
VARS2Q5ST30 AES-207ENST00000586839 942 ntTSL 1 (best) BASIC23.7■■□□□ 1.38
VARS2Q5ST30 KLC3-202ENST00000470402 1820 ntTSL 1 (best) BASIC23.7■■□□□ 1.38
VARS2Q5ST30 C2CD4B-201ENST00000380392 1579 ntAPPRIS P1 TSL 2 BASIC23.69■■□□□ 1.38
VARS2Q5ST30 AKT1S1-204ENST00000391832 1911 ntAPPRIS P1 TSL 1 (best) BASIC23.69■■□□□ 1.38
VARS2Q5ST30 LSM8-203ENST00000422760 1920 ntTSL 1 (best) BASIC23.69■■□□□ 1.38
VARS2Q5ST30 C11orf96-201ENST00000339446 1308 ntTSL 5 BASIC23.69■■□□□ 1.38
VARS2Q5ST30 GFRA3-202ENST00000378362 1837 ntAPPRIS ALT2 TSL 1 (best) BASIC23.69■■□□□ 1.38
VARS2Q5ST30 AC079630.1-202ENST00000618127 1840 ntBASIC23.69■■□□□ 1.38
VARS2Q5ST30 ATP6V0E2-204ENST00000464662 513 ntAPPRIS P1 TSL 2 BASIC23.69■■□□□ 1.38
VARS2Q5ST30 UQCR11-202ENST00000589880 504 ntAPPRIS P1 TSL 3 BASIC23.69■■□□□ 1.38
VARS2Q5ST30 SP2-202ENST00000613139 908 ntTSL 5 BASIC23.69■■□□□ 1.38
VARS2Q5ST30 NAGS-201ENST00000293404 2182 ntAPPRIS P1 TSL 1 (best) BASIC23.69■■□□□ 1.38
VARS2Q5ST30 POMZP3-202ENST00000310842 1490 ntAPPRIS P1 TSL 1 (best) BASIC23.68■■□□□ 1.38
VARS2Q5ST30 TRAF4-205ENST00000444415 1456 ntTSL 5 BASIC23.68■■□□□ 1.38
VARS2Q5ST30 CYP2A13-201ENST00000330436 1739 ntAPPRIS P1 TSL 1 (best) BASIC23.68■■□□□ 1.38
VARS2Q5ST30 LINC00454-202ENST00000430978 1327 ntTSL 5 BASIC23.68■■□□□ 1.38
VARS2Q5ST30 AK1-201ENST00000223836 736 ntTSL 3 BASIC23.68■■□□□ 1.38
VARS2Q5ST30 C1QL1-201ENST00000253407 1295 ntAPPRIS P1 TSL 1 (best) BASIC23.68■■□□□ 1.38
VARS2Q5ST30 AL138963.3-201ENST00000610057 588 ntTSL 4 BASIC23.68■■□□□ 1.38
VARS2Q5ST30 ACP1-201ENST00000272065 1549 ntAPPRIS P5 TSL 1 (best) BASIC23.68■■□□□ 1.38
VARS2Q5ST30 NPAS1-208ENST00000602212 2117 ntAPPRIS P1 TSL 1 (best) BASIC23.68■■□□□ 1.38
VARS2Q5ST30 POLD2-207ENST00000452185 1659 ntAPPRIS P1 TSL 1 (best) BASIC23.67■■□□□ 1.38
VARS2Q5ST30 NDUFB2-201ENST00000247866 504 ntAPPRIS P1 TSL 1 (best) BASIC23.67■■□□□ 1.38
VARS2Q5ST30 CCDC115-202ENST00000409127 1247 ntTSL 2 BASIC23.67■■□□□ 1.38
Retrieved 100 of 98,524 protein–RNA pairs in 15.6 ms