Protein–RNA interactions for Protein: Q01560

NPL3, Nucleolar protein 3, yeastyeast

Known RBP RIP-Chip data

Length 414 aa.

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Protein RNA Prediction (catRAPID) Interaction (RIP-Chip)
Gene UniProt Accession Gene Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score Detected Interaction
NPL3Q01560 PYC1YGL062W 3537 nt5.46□□□□□ -1.54
NPL3Q01560 POL31YJR006W 1464 nt5.45□□□□□ -1.54
NPL3Q01560 YFL064CYFL064C 525 nt5.45□□□□□ -1.54
NPL3Q01560 JLP1YLL057C 1239 nt5.45□□□□□ -1.54
NPL3Q01560 ATG34YOL083W 1239 nt5.45□□□□□ -1.54
NPL3Q01560 IRC13YOR235W 315 nt5.45□□□□□ -1.54
NPL3Q01560 ROG3YFR022W 2202 nt5.45□□□□□ -1.54
NPL3Q01560 TRK2YKR050W 2670 nt5.44□□□□□ -1.54
NPL3Q01560 YCR097W-AYCR097W-A 267 nt5.44□□□□□ -1.54
NPL3Q01560 TYS1YGR185C 1185 nt5.44□□□□□ -1.54
NPL3Q01560 KTR7YIL085C 1554 nt5.44□□□□□ -1.54
NPL3Q01560 PUT1YLR142W 1431 nt5.44□□□□□ -1.54
NPL3Q01560 GUA1YMR217W 1578 nt5.44□□□□□ -1.54
NPL3Q01560 BUL1YMR275C 2931 nt5.44□□□□□ -1.54
NPL3Q01560 SRL4YPL033C 846 nt5.44□□□□□ -1.54
NPL3Q01560 ICS2YBR157C 768 nt5.44□□□□□ -1.54 RIP-Chip
NPL3Q01560 MCM4YPR019W 2802 nt5.44□□□□□ -1.54
NPL3Q01560 KTR6YPL053C 1341 nt5.44□□□□□ -1.54
NPL3Q01560 RCK2YLR248W 1833 nt5.44□□□□□ -1.54
NPL3Q01560 MMT1YMR177W 1533 nt5.43□□□□□ -1.54
NPL3Q01560 TEF1YPR080W 1377 nt5.43□□□□□ -1.54
NPL3Q01560 TEF2YBR118W 1377 nt5.43□□□□□ -1.54
NPL3Q01560 SSK22YCR073C 3996 nt5.43□□□□□ -1.54
NPL3Q01560 YGL036WYGL036W 2730 nt5.43□□□□□ -1.54
NPL3Q01560 snR56snR56 88 nt5.43□□□□□ -1.54
NPL3Q01560 ATP16YDL004W 483 nt5.43□□□□□ -1.54 RIP-Chip
NPL3Q01560 YDL012CYDL012C 324 nt5.43□□□□□ -1.54
NPL3Q01560 COX26YDR119W-A 201 nt5.43□□□□□ -1.54
NPL3Q01560 RPN9YDR427W 1182 nt5.43□□□□□ -1.54
NPL3Q01560 SIP2YGL208W 1248 nt5.43□□□□□ -1.54 RIP-Chip
NPL3Q01560 PEF1YGR058W 1008 nt5.43□□□□□ -1.54
NPL3Q01560 YJL032WYJL032W 315 nt5.43□□□□□ -1.54
NPL3Q01560 SMD2YLR275W 333 nt5.43□□□□□ -1.54
NPL3Q01560 YLR317WYLR317W 435 nt5.43□□□□□ -1.54
NPL3Q01560 PGA3YML125C 939 nt5.43□□□□□ -1.54 RIP-Chip
NPL3Q01560 BMT2YBR141C 1014 nt5.43□□□□□ -1.54
NPL3Q01560 YBR230W-AYBR230W-A 201 nt5.43□□□□□ -1.54
NPL3Q01560 RGT1YKL038W 3513 nt5.43□□□□□ -1.54
NPL3Q01560 HSF1YGL073W 2502 nt5.43□□□□□ -1.54
NPL3Q01560 ACC1YNR016C 6702 nt5.42□□□□□ -1.54
NPL3Q01560 ART10YLR392C 1557 nt5.42□□□□□ -1.54
NPL3Q01560 YFL019CYFL019C 354 nt5.42□□□□□ -1.54
NPL3Q01560 YGR122WYGR122W 1209 nt5.42□□□□□ -1.54
NPL3Q01560 RPL24BYGR148C 468 nt5.42□□□□□ -1.54 RIP-Chip
NPL3Q01560 YGR176WYGR176W 348 nt5.42□□□□□ -1.54
NPL3Q01560 PGU1YJR153W 1086 nt5.42□□□□□ -1.54
NPL3Q01560 TVP38YKR088C 1014 nt5.42□□□□□ -1.54 RIP-Chip
NPL3Q01560 YML101C-AYML101C-A 318 nt5.42□□□□□ -1.54
NPL3Q01560 YBL068W-AYBL068W-A 237 nt5.42□□□□□ -1.54
NPL3Q01560 DAL82YNL314W 768 nt5.42□□□□□ -1.54 RIP-Chip
NPL3Q01560 ARG1YOL058W 1263 nt5.42□□□□□ -1.54
NPL3Q01560 YLR108CYLR108C 1458 nt5.42□□□□□ -1.54
NPL3Q01560 EAR1YMR171C 1653 nt5.42□□□□□ -1.54
NPL3Q01560 QDR3YBR043C 2070 nt5.42□□□□□ -1.54
NPL3Q01560 NGL3YML118W 1518 nt5.42□□□□□ -1.54
NPL3Q01560 TAX4YJL083W 1815 nt5.41□□□□□ -1.54
NPL3Q01560 WTM2YOR229W 1404 nt5.41□□□□□ -1.54
NPL3Q01560 RTK1YDL025C 1863 nt5.41□□□□□ -1.54
NPL3Q01560 DUR1,2YBR208C 5508 nt5.41□□□□□ -1.54
NPL3Q01560 PHO90YJL198W 2646 nt5.41□□□□□ -1.54
NPL3Q01560 VAC17YCL063W 1272 nt5.41□□□□□ -1.54
NPL3Q01560 KNH1YDL049C 807 nt5.41□□□□□ -1.54
NPL3Q01560 VCX1YDL128W 1236 nt5.41□□□□□ -1.54
NPL3Q01560 VMA7YGR020C 357 nt5.41□□□□□ -1.54 RIP-Chip
NPL3Q01560 BTN2YGR142W 1233 nt5.41□□□□□ -1.54
NPL3Q01560 RTA1YGR213C 954 nt5.41□□□□□ -1.54
NPL3Q01560 BET1YIL004C 429 nt5.41□□□□□ -1.54
NPL3Q01560 PCL7YIL050W 858 nt5.41□□□□□ -1.54 RIP-Chip
NPL3Q01560 VPS25YJR102C 609 nt5.41□□□□□ -1.54 RIP-Chip
NPL3Q01560 YLR194CYLR194C 765 nt5.41□□□□□ -1.54 RIP-Chip
NPL3Q01560 GCD7YLR291C 1146 nt5.41□□□□□ -1.54
NPL3Q01560 ATP20YPR020W 348 nt5.41□□□□□ -1.54 RIP-Chip
NPL3Q01560 CCL1YPR025C 1182 nt5.41□□□□□ -1.54
NPL3Q01560 MED8YBR193C 672 nt5.41□□□□□ -1.54
NPL3Q01560 SUM1YDR310C 3189 nt5.41□□□□□ -1.54
NPL3Q01560 CST6YIL036W 1764 nt5.41□□□□□ -1.54
NPL3Q01560 MNN2YBR015C 1794 nt5.41□□□□□ -1.54
NPL3Q01560 YFL040WYFL040W 1623 nt5.41□□□□□ -1.54
NPL3Q01560 MSA1YOR066W 1890 nt5.41□□□□□ -1.54
NPL3Q01560 YTM1YOR272W 1383 nt5.41□□□□□ -1.54
NPL3Q01560 GPB1YOR371C 2694 nt5.41□□□□□ -1.54
NPL3Q01560 SHE10YGL228W 1734 nt5.4□□□□□ -1.54
NPL3Q01560 SNT2YGL131C 4212 nt5.4□□□□□ -1.54
NPL3Q01560 YBR139WYBR139W 1527 nt5.4□□□□□ -1.54
NPL3Q01560 YDL034WYDL034W 345 nt5.4□□□□□ -1.54
NPL3Q01560 YDR056CYDR056C 618 nt5.4□□□□□ -1.54 RIP-Chip
NPL3Q01560 STE2YFL026W 1296 nt5.4□□□□□ -1.54 RIP-Chip
NPL3Q01560 FRA2YGL220W 363 nt5.4□□□□□ -1.54 RIP-Chip
NPL3Q01560 RSM27YGR215W 333 nt5.4□□□□□ -1.54
NPL3Q01560 YJL068CYJL068C 900 nt5.4□□□□□ -1.54
NPL3Q01560 YLR339CYLR339C 552 nt5.4□□□□□ -1.54
NPL3Q01560 YPL062WYPL062W 405 nt5.4□□□□□ -1.54
NPL3Q01560 POC4YPL144W 447 nt5.4□□□□□ -1.54
NPL3Q01560 RRP7YCL031C 894 nt5.4□□□□□ -1.54
NPL3Q01560 RPN4YDL020C 1596 nt5.4□□□□□ -1.55
NPL3Q01560 EUG1YDR518W 1554 nt5.4□□□□□ -1.55
NPL3Q01560 ADE13YLR359W 1449 nt5.4□□□□□ -1.55
NPL3Q01560 DET1YDR051C 1005 nt5.39□□□□□ -1.55
NPL3Q01560 HSP42YDR171W 1128 nt5.39□□□□□ -1.55 RIP-Chip
NPL3Q01560 MLC1YGL106W 450 nt5.39□□□□□ -1.55 RIP-Chip
Retrieved 100 of 7,029 protein–RNA pairs in 15.4 ms