Protein–RNA interactions for Protein: Q00578

SSL2, General transcription and DNA repair factor IIH helicase subunit XPB, yeastyeast

Predictions only

Length 843 aa.

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Protein RNA Prediction (catRAPID) Interaction (RIP-Chip)
Gene UniProt Accession Gene Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score Detected Interaction
SSL2Q00578 PAD1YDR538W 729 nt5.25□□□□□ -1.57
SSL2Q00578 CAF16YFL028C 870 nt5.25□□□□□ -1.57
SSL2Q00578 YPL073CYPL073C 486 nt5.25□□□□□ -1.57
SSL2Q00578 APA1YCL050C 966 nt5.25□□□□□ -1.57
SSL2Q00578 PSE1YMR308C 3270 nt5.24□□□□□ -1.57
SSL2Q00578 VHC1YBR235W 3363 nt5.24□□□□□ -1.57
SSL2Q00578 SER33YIL074C 1410 nt5.24□□□□□ -1.57
SSL2Q00578 GLE2YER107C 1098 nt5.24□□□□□ -1.57
SSL2Q00578 ECT1YGR007W 972 nt5.24□□□□□ -1.57
SSL2Q00578 YLR124WYLR124W 345 nt5.24□□□□□ -1.57
SSL2Q00578 PRE7YBL041W 726 nt5.24□□□□□ -1.57
SSL2Q00578 YIM1YMR152W 1098 nt5.24□□□□□ -1.57
SSL2Q00578 YOR097CYOR097C 528 nt5.24□□□□□ -1.57
SSL2Q00578 snR19snR19 568 nt5.24□□□□□ -1.57
SSL2Q00578 POP4YBR257W 840 nt5.24□□□□□ -1.57
SSL2Q00578 YCL021W-AYCL021W-A 378 nt5.24□□□□□ -1.57
SSL2Q00578 YCL041CYCL041C 495 nt5.24□□□□□ -1.57
SSL2Q00578 TFG1YGR186W 2208 nt5.24□□□□□ -1.57
SSL2Q00578 RIM15YFL033C 5313 nt5.23□□□□□ -1.57
SSL2Q00578 RAD28YDR030C 1521 nt5.23□□□□□ -1.57
SSL2Q00578 MDR1YGR100W 2853 nt5.23□□□□□ -1.57
SSL2Q00578 PMT5YDL093W 2232 nt5.23□□□□□ -1.57
SSL2Q00578 YHR137C-AYHR137C-A 651 nt5.23□□□□□ -1.57
SSL2Q00578 YIL089WYIL089W 618 nt5.23□□□□□ -1.57
SSL2Q00578 MRT4YKL009W 711 nt5.23□□□□□ -1.57
SSL2Q00578 YKL091CYKL091C 933 nt5.23□□□□□ -1.57
SSL2Q00578 YLR202CYLR202C 327 nt5.23□□□□□ -1.57
SSL2Q00578 ROT1YMR200W 771 nt5.23□□□□□ -1.57
SSL2Q00578 ANT1YPR128C 987 nt5.23□□□□□ -1.57
SSL2Q00578 RAD57YDR004W 1383 nt5.23□□□□□ -1.57
SSL2Q00578 PAH1YMR165C 2589 nt5.23□□□□□ -1.57
SSL2Q00578 ASK10YGR097W 3441 nt5.23□□□□□ -1.57
SSL2Q00578 SEC39YLR440C 2130 nt5.23□□□□□ -1.57
SSL2Q00578 YJR015WYJR015W 1533 nt5.23□□□□□ -1.57
SSL2Q00578 SHE9YDR393W 1371 nt5.22□□□□□ -1.57
SSL2Q00578 RNH202YDR279W 1053 nt5.22□□□□□ -1.57
SSL2Q00578 DAN1YJR150C 897 nt5.22□□□□□ -1.57
SSL2Q00578 TEX1YNL253W 1269 nt5.22□□□□□ -1.57
SSL2Q00578 ARC40YBR234C 1155 nt5.22□□□□□ -1.57
SSL2Q00578 RFT1YBL020W 1725 nt5.22□□□□□ -1.57
SSL2Q00578 MUP3YHL036W 1641 nt5.22□□□□□ -1.57
SSL2Q00578 PRP19YLL036C 1512 nt5.22□□□□□ -1.57
SSL2Q00578 ESF1YDR365C 1887 nt5.22□□□□□ -1.57
SSL2Q00578 AKL1YBR059C 3327 nt5.21□□□□□ -1.58
SSL2Q00578 AIM6YDL237W 1173 nt5.21□□□□□ -1.58
SSL2Q00578 PCT1YGR202C 1275 nt5.21□□□□□ -1.58
SSL2Q00578 YJL032WYJL032W 315 nt5.21□□□□□ -1.58
SSL2Q00578 MNN11YJL183W 1269 nt5.21□□□□□ -1.58
SSL2Q00578 IBD2YNL164C 1056 nt5.21□□□□□ -1.58
SSL2Q00578 REX4YOL080C 870 nt5.21□□□□□ -1.58
SSL2Q00578 CDC21YOR074C 915 nt5.21□□□□□ -1.58
SSL2Q00578 YPR169W-AYPR169W-A 219 nt5.21□□□□□ -1.58
SSL2Q00578 YPR170W-BYPR170W-B 258 nt5.21□□□□□ -1.58
SSL2Q00578 PRD1YCL057W 2139 nt5.21□□□□□ -1.58
SSL2Q00578 SEO1YAL067C 1782 nt5.21□□□□□ -1.58
SSL2Q00578 TOS3YGL179C 1683 nt5.21□□□□□ -1.58
SSL2Q00578 MLF3YNL074C 1359 nt5.2□□□□□ -1.58
SSL2Q00578 RSC30YHR056C 2652 nt5.2□□□□□ -1.58
SSL2Q00578 SIC1YLR079W 855 nt5.2□□□□□ -1.58
SSL2Q00578 NIT3YLR351C 876 nt5.2□□□□□ -1.58
SSL2Q00578 GLO4YOR040W 858 nt5.2□□□□□ -1.58
SSL2Q00578 SRB6YBR253W 366 nt5.2□□□□□ -1.58
SSL2Q00578 APC4YDR118W 1959 nt5.2□□□□□ -1.58
SSL2Q00578 RAD30YDR419W 1899 nt5.2□□□□□ -1.58
SSL2Q00578 SIF2YBR103W 1608 nt5.19□□□□□ -1.58
SSL2Q00578 RRB1YMR131C 1536 nt5.19□□□□□ -1.58
SSL2Q00578 YBR139WYBR139W 1527 nt5.19□□□□□ -1.58
SSL2Q00578 ECM32YER176W 3366 nt5.19□□□□□ -1.58
SSL2Q00578 NUP42YDR192C 1293 nt5.19□□□□□ -1.58
SSL2Q00578 ACT1YFL039C 1128 nt5.19□□□□□ -1.58
SSL2Q00578 KXD1YGL079W 657 nt5.19□□□□□ -1.58
SSL2Q00578 PEX14YGL153W 1026 nt5.19□□□□□ -1.58
SSL2Q00578 YUH1YJR099W 711 nt5.19□□□□□ -1.58
SSL2Q00578 FBP1YLR377C 1047 nt5.19□□□□□ -1.58
SSL2Q00578 HEK2YBL032W 1146 nt5.19□□□□□ -1.58
SSL2Q00578 HLJ1YMR161W 675 nt5.19□□□□□ -1.58
SSL2Q00578 SFG1YOR315W 1041 nt5.19□□□□□ -1.58
SSL2Q00578 YPL199CYPL199C 723 nt5.19□□□□□ -1.58
SSL2Q00578 YPR015CYPR015C 744 nt5.19□□□□□ -1.58
SSL2Q00578 YPR153WYPR153W 423 nt5.19□□□□□ -1.58
SSL2Q00578 MTC1YJL123C 1437 nt5.19□□□□□ -1.58
SSL2Q00578 TMN2YDR107C 2019 nt5.19□□□□□ -1.58
SSL2Q00578 SAD1YFR005C 1347 nt5.19□□□□□ -1.58
SSL2Q00578 SLM5YCR024C 1479 nt5.19□□□□□ -1.58
SSL2Q00578 KRS1YDR037W 1776 nt5.19□□□□□ -1.58
SSL2Q00578 KGD1YIL125W 3045 nt5.18□□□□□ -1.58
SSL2Q00578 CPS1YJL172W 1731 nt5.18□□□□□ -1.58
SSL2Q00578 CBS2YDR197W 1170 nt5.18□□□□□ -1.58
SSL2Q00578 KEG1YFR042W 603 nt5.18□□□□□ -1.58
SSL2Q00578 DSD1YGL196W 1287 nt5.18□□□□□ -1.58
SSL2Q00578 PRM10YJL108C 1152 nt5.18□□□□□ -1.58
SSL2Q00578 URA5YML106W 681 nt5.18□□□□□ -1.58
SSL2Q00578 IPP1YBR011C 864 nt5.18□□□□□ -1.58
SSL2Q00578 GRX5YPL059W 453 nt5.18□□□□□ -1.58
SSL2Q00578 MED8YBR193C 672 nt5.18□□□□□ -1.58
SSL2Q00578 SLS1YLR139C 1932 nt5.18□□□□□ -1.58
SSL2Q00578 TUB3YML124C 1338 nt5.18□□□□□ -1.58
SSL2Q00578 HPC2YBR215W 1878 nt5.17□□□□□ -1.58
SSL2Q00578 SSU1YPL092W 1377 nt5.17□□□□□ -1.58
SSL2Q00578 PRR2YDL214C 2100 nt5.17□□□□□ -1.58
Retrieved 100 of 7,029 protein–RNA pairs in 17.3 ms