Protein–RNA interactions for Protein: P78539

SRPX, Sushi repeat-containing protein SRPX, humanhuman

Predictions only

Length 464 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SRPXP78539 DISC1-220ENST00000602873 1553 ntAPPRIS ALT2 TSL 1 (best) BASIC18.38■□□□□ 0.53
SRPXP78539 AC007375.3-201ENST00000600936 2314 ntBASIC18.38■□□□□ 0.53
SRPXP78539 CCDC157-202ENST00000399824 1759 ntAPPRIS ALT2 TSL 1 (best) BASIC18.38■□□□□ 0.53
SRPXP78539 YWHAZ-205ENST00000395956 2974 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
SRPXP78539 ZDHHC14-203ENST00000359775 7380 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
SRPXP78539 ALDH16A1-202ENST00000455361 2470 ntTSL 2 BASIC18.38■□□□□ 0.53
SRPXP78539 PKIG-207ENST00000372894 1191 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
SRPXP78539 CDKN2A-214ENST00000579755 1283 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
SRPXP78539 ZBTB7A-201ENST00000322357 5422 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
SRPXP78539 PSPH-202ENST00000395471 2178 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
SRPXP78539 DRAM2-201ENST00000286692 2246 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
SRPXP78539 GAS2L1-206ENST00000610653 2238 ntTSL 1 (best) BASIC18.38■□□□□ 0.53
SRPXP78539 AC131274.2-201ENST00000580697 1507 ntBASIC18.38■□□□□ 0.53
SRPXP78539 AOC3-207ENST00000617500 2392 ntTSL 4 BASIC18.38■□□□□ 0.53
SRPXP78539 SAMD8-202ENST00000372690 1654 ntTSL 1 (best) BASIC18.38■□□□□ 0.53
SRPXP78539 ADORA2B-201ENST00000304222 1735 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
SRPXP78539 PTP4A3-204ENST00000521578 1717 ntAPPRIS P1 TSL 5 BASIC18.37■□□□□ 0.53
SRPXP78539 NPHS2-201ENST00000367615 1855 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
SRPXP78539 HIC1-207ENST00000619757 6711 ntTSL 1 (best) BASIC18.37■□□□□ 0.53
SRPXP78539 TMEM159-201ENST00000233047 2014 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
SRPXP78539 NHLRC4-202ENST00000540585 2071 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
SRPXP78539 LZTS3-201ENST00000329152 5257 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
SRPXP78539 MYB-221ENST00000527615 2381 ntTSL 5 BASIC18.37■□□□□ 0.53
SRPXP78539 DISC1-223ENST00000628350 2363 ntAPPRIS ALT2 TSL 1 (best) BASIC18.37■□□□□ 0.53
SRPXP78539 WBP1-201ENST00000233615 1294 ntAPPRIS P2 TSL 1 (best) BASIC18.37■□□□□ 0.53
SRPXP78539 MIR639-201ENST00000384974 98 ntBASIC18.37■□□□□ 0.53
SRPXP78539 AGO3-204ENST00000397828 1035 ntTSL 2 BASIC18.37■□□□□ 0.53
SRPXP78539 AC087393.1-201ENST00000582896 145 ntBASIC18.37■□□□□ 0.53
SRPXP78539 AC133552.2-201ENST00000619106 1032 ntBASIC18.37■□□□□ 0.53
SRPXP78539 KEAP1-202ENST00000393623 2648 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
SRPXP78539 TMUB1-203ENST00000462940 1549 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
SRPXP78539 DENND6A-201ENST00000311128 4655 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
SRPXP78539 AC009831.1-201ENST00000580420 1582 ntBASIC18.37■□□□□ 0.53
SRPXP78539 ZDHHC16-203ENST00000353979 1647 ntTSL 1 (best) BASIC18.37■□□□□ 0.53
SRPXP78539 PDIA2-201ENST00000219406 1698 ntAPPRIS P2 TSL 1 (best) BASIC18.37■□□□□ 0.53
SRPXP78539 AKT1S1-206ENST00000391834 1849 ntAPPRIS P1 TSL 5 BASIC18.37■□□□□ 0.53
SRPXP78539 VGLL3-201ENST00000383698 2475 ntAPPRIS ALT2 TSL 1 (best) BASIC18.37■□□□□ 0.53
SRPXP78539 RHOT1-205ENST00000545287 2516 ntAPPRIS P4 TSL 5 BASIC18.37■□□□□ 0.53
SRPXP78539 TPM4-201ENST00000300933 2666 ntTSL 1 (best) BASIC18.36■□□□□ 0.53
SRPXP78539 GPR27-201ENST00000304411 2447 ntAPPRIS P1 BASIC18.36■□□□□ 0.53
SRPXP78539 MPC1-201ENST00000341756 976 ntTSL 1 (best) BASIC18.36■□□□□ 0.53
SRPXP78539 SERPINB5-201ENST00000382771 2783 ntAPPRIS P1 TSL 1 (best) BASIC18.36■□□□□ 0.53
SRPXP78539 TCP1-202ENST00000392168 1878 ntTSL 5 BASIC18.36■□□□□ 0.53
SRPXP78539 TMEM191C-206ENST00000432134 1129 ntAPPRIS ALT2 TSL 5 BASIC18.36■□□□□ 0.53
SRPXP78539 MTERF3-204ENST00000523821 1529 ntTSL 1 (best) BASIC18.36■□□□□ 0.53
SRPXP78539 SOCS2-202ENST00000536696 1065 ntAPPRIS P1 TSL 2 BASIC18.36■□□□□ 0.53
SRPXP78539 SLC25A47-202ENST00000557052 1552 ntTSL 1 (best) BASIC18.36■□□□□ 0.53
SRPXP78539 ZSCAN18-217ENST00000601144 2190 ntAPPRIS P3 TSL 1 (best) BASIC18.36■□□□□ 0.53
SRPXP78539 MPC1-206ENST00000621630 977 ntAPPRIS ALT1 TSL 5 BASIC18.36■□□□□ 0.53
SRPXP78539 MPC1-207ENST00000621685 1192 ntTSL 5 BASIC18.36■□□□□ 0.53
SRPXP78539 GPR137B-202ENST00000366592 2042 ntAPPRIS P2 TSL 1 (best) BASIC18.35■□□□□ 0.53
SRPXP78539 RNF39-202ENST00000376751 1970 ntTSL 1 (best) BASIC18.35■□□□□ 0.53
SRPXP78539 ZNF568-208ENST00000586353 1902 ntTSL 1 (best) BASIC18.35■□□□□ 0.53
SRPXP78539 AC079630.1-202ENST00000618127 1840 ntBASIC18.35■□□□□ 0.53
SRPXP78539 SH3YL1-201ENST00000356150 1763 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
SRPXP78539 FAM171A2-201ENST00000293443 3160 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
SRPXP78539 UBE2E3-202ENST00000410062 1570 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
SRPXP78539 PFKFB4-204ENST00000416568 1575 ntTSL 1 (best) BASIC18.35■□□□□ 0.53
SRPXP78539 MALT1-201ENST00000345724 2866 ntAPPRIS ALT2 TSL 1 (best) BASIC18.35■□□□□ 0.53
SRPXP78539 MADCAM1-202ENST00000346144 1309 ntAPPRIS ALT2 TSL 1 (best) BASIC18.35■□□□□ 0.53
SRPXP78539 CLN6-201ENST00000249806 2243 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
SRPXP78539 MPST-202ENST00000397225 2116 ntAPPRIS P1 TSL 2 BASIC18.35■□□□□ 0.53
SRPXP78539 KCNIP1-201ENST00000328939 2014 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
SRPXP78539 CREB1-205ENST00000430624 2005 ntAPPRIS P1 TSL 5 BASIC18.35■□□□□ 0.53
SRPXP78539 IL15RA-204ENST00000379977 1626 ntAPPRIS P3 TSL 1 (best) BASIC18.34■□□□□ 0.53
SRPXP78539 EVX1-201ENST00000222761 1500 ntTSL 1 (best) BASIC18.34■□□□□ 0.53
SRPXP78539 LHPP-201ENST00000368839 1522 ntTSL 1 (best) BASIC18.34■□□□□ 0.53
SRPXP78539 PLPP5-209ENST00000529359 2185 ntTSL 1 (best) BASIC18.34■□□□□ 0.53
SRPXP78539 MPZL1-201ENST00000359523 5010 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
SRPXP78539 BICRA-204ENST00000614245 5697 ntAPPRIS ALT2 TSL 5 BASIC18.34■□□□□ 0.53
SRPXP78539 RAD9A-201ENST00000307980 2119 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
SRPXP78539 DYRK1B-204ENST00000593685 2724 ntAPPRIS P3 TSL 5 BASIC18.34■□□□□ 0.53
SRPXP78539 TNFAIP2-209ENST00000560869 4683 ntAPPRIS P1 TSL 5 BASIC18.34■□□□□ 0.53
SRPXP78539 AC139530.1-201ENST00000575312 1977 ntBASIC18.34■□□□□ 0.53
SRPXP78539 ENDOG-201ENST00000372642 1172 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
SRPXP78539 HERC2P9-201ENST00000507787 1023 ntTSL 1 (best) BASIC18.34■□□□□ 0.53
SRPXP78539 NIPSNAP2-205ENST00000446778 1882 ntTSL 2 BASIC18.34■□□□□ 0.53
SRPXP78539 SLC19A1-209ENST00000485649 1896 ntAPPRIS ALT2 TSL 2 BASIC18.34■□□□□ 0.53
SRPXP78539 JUNB-201ENST00000302754 1820 ntAPPRIS P1 BASIC18.34■□□□□ 0.53
SRPXP78539 WRAP73-201ENST00000270708 1665 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
SRPXP78539 COL15A1-201ENST00000375001 5496 ntAPPRIS P2 TSL 1 (best) BASIC18.34■□□□□ 0.53
SRPXP78539 SLC25A1-202ENST00000451283 1514 ntTSL 2 BASIC18.33■□□□□ 0.53
SRPXP78539 SLC35F4-206ENST00000556826 1908 ntAPPRIS P1 TSL 5 BASIC18.33■□□□□ 0.53
SRPXP78539 SLC22A31-201ENST00000562855 1909 ntAPPRIS P1 TSL 5 BASIC18.33■□□□□ 0.53
SRPXP78539 PPP4C-201ENST00000279387 1407 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.53
SRPXP78539 DNM2-205ENST00000585892 2774 ntTSL 1 (best) BASIC18.33■□□□□ 0.53
SRPXP78539 METTL9-202ENST00000396014 1817 ntAPPRIS ALT1 TSL 1 (best) BASIC18.33■□□□□ 0.53
SRPXP78539 ODC1-201ENST00000234111 2653 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.53
SRPXP78539 IRX2-202ENST00000382611 2630 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.53
SRPXP78539 RASGRP2-210ENST00000394430 2174 ntTSL 2 BASIC18.33■□□□□ 0.52
SRPXP78539 AC005906.2-202ENST00000638821 2168 ntTSL 5 BASIC18.33■□□□□ 0.52
SRPXP78539 SYT6-209ENST00000610222 1707 ntAPPRIS P1 TSL 5 BASIC18.33■□□□□ 0.52
SRPXP78539 BX088645.1-201ENST00000636699 1728 ntAPPRIS P1 TSL 5 BASIC18.33■□□□□ 0.52
SRPXP78539 ZNF784-201ENST00000325351 2021 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.52
SRPXP78539 USP48-205ENST00000421625 2818 ntTSL 2 BASIC18.33■□□□□ 0.52
SRPXP78539 ARL13B-205ENST00000471138 2206 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.52
SRPXP78539 RBM42-205ENST00000589871 1487 ntTSL 5 BASIC18.33■□□□□ 0.52
SRPXP78539 IRX2-201ENST00000302057 2456 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
SRPXP78539 DUX4-203ENST00000565211 1710 ntAPPRIS P2 TSL 1 (best) BASIC18.32■□□□□ 0.52
SRPXP78539 RBFOX2-209ENST00000438146 1356 ntAPPRIS P3 TSL 1 (best) BASIC18.32■□□□□ 0.52
Retrieved 100 of 98,524 protein–RNA pairs in 16.7 ms