Protein–RNA interactions for Protein: P68431

HIST1H3A, Histone H3.1, humanhuman

Predictions only

Length 136 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HIST1H3AP68431 ARL2-SNX15-201ENST00000301886 2392 ntAPPRIS P1 TSL 2 BASIC19.52■□□□□ 0.72
HIST1H3AP68431 CAMK2N2-201ENST00000296238 1362 ntAPPRIS P1 TSL 1 (best) BASIC19.52■□□□□ 0.72
HIST1H3AP68431 UTS2R-201ENST00000313135 1357 ntAPPRIS P1 BASIC19.52■□□□□ 0.72
HIST1H3AP68431 DONSON-202ENST00000303113 2028 ntTSL 5 BASIC19.52■□□□□ 0.72
HIST1H3AP68431 EEF1D-203ENST00000419152 1452 ntAPPRIS ALT2 TSL 5 BASIC19.52■□□□□ 0.72
HIST1H3AP68431 GALC-202ENST00000393568 2054 ntTSL 2 BASIC19.52■□□□□ 0.71
HIST1H3AP68431 ZNF668-205ENST00000426488 2282 ntTSL 5 BASIC19.51■□□□□ 0.71
HIST1H3AP68431 PACRGL-201ENST00000295290 1937 ntTSL 5 BASIC19.51■□□□□ 0.71
HIST1H3AP68431 USF3-203ENST00000491165 2133 ntAPPRIS ALT2 TSL 1 (best) BASIC19.51■□□□□ 0.71
HIST1H3AP68431 LSR-204ENST00000361790 2210 ntAPPRIS P4 TSL 1 (best) BASIC19.51■□□□□ 0.71
HIST1H3AP68431 GUSBP5-201ENST00000418136 578 ntBASIC19.51■□□□□ 0.71
HIST1H3AP68431 EPDR1-202ENST00000423717 638 ntTSL 1 (best) BASIC19.51■□□□□ 0.71
HIST1H3AP68431 PRELID1-203ENST00000503216 1171 ntTSL 1 (best) BASIC19.51■□□□□ 0.71
HIST1H3AP68431 DUX4L4-201ENST00000566884 1269 ntBASIC19.51■□□□□ 0.71
HIST1H3AP68431 ANXA8-204ENST00000583911 1874 ntTSL 2 BASIC19.51■□□□□ 0.71
HIST1H3AP68431 AGAP3-201ENST00000335367 2675 ntTSL 1 (best) BASIC19.51■□□□□ 0.71
HIST1H3AP68431 SLC25A5-AS1-202ENST00000445759 1616 ntTSL 1 (best) BASIC19.51■□□□□ 0.71
HIST1H3AP68431 CCDC85B-201ENST00000312579 1524 ntAPPRIS P1 BASIC19.51■□□□□ 0.71
HIST1H3AP68431 AL353743.1-201ENST00000637846 1769 ntTSL 5 BASIC19.5■□□□□ 0.71
HIST1H3AP68431 SLC12A2-201ENST00000262461 6885 ntAPPRIS P3 TSL 1 (best) BASIC19.5■□□□□ 0.71
HIST1H3AP68431 TMEM54-201ENST00000329151 871 ntTSL 1 (best) BASIC19.5■□□□□ 0.71
HIST1H3AP68431 KISS1-201ENST00000367194 709 ntAPPRIS P2 TSL 1 (best) BASIC19.5■□□□□ 0.71
HIST1H3AP68431 SDHAP1-204ENST00000427415 559 ntTSL 4 BASIC19.5■□□□□ 0.71
HIST1H3AP68431 C14orf80-211ENST00000450383 1107 ntAPPRIS ALT2 TSL 5 BASIC19.5■□□□□ 0.71
HIST1H3AP68431 SLC16A10-206ENST00000612036 1231 ntTSL 5 BASIC19.5■□□□□ 0.71
HIST1H3AP68431 AKT1-201ENST00000349310 2866 ntAPPRIS P1 TSL 1 (best) BASIC19.5■□□□□ 0.71
HIST1H3AP68431 RGS6-209ENST00000553525 2005 ntAPPRIS ALT1 TSL 2 BASIC19.5■□□□□ 0.71
HIST1H3AP68431 TMEM64-203ENST00000458549 4997 ntAPPRIS P1 TSL 1 (best) BASIC19.5■□□□□ 0.71
HIST1H3AP68431 ARL6IP4-201ENST00000315580 1644 ntAPPRIS P3 TSL 1 (best) BASIC19.5■□□□□ 0.71
HIST1H3AP68431 TANGO2-201ENST00000327374 2273 ntAPPRIS P1 TSL 1 (best) BASIC19.5■□□□□ 0.71
HIST1H3AP68431 DTNB-211ENST00000407661 2420 ntAPPRIS ALT1 TSL 1 (best) BASIC19.5■□□□□ 0.71
HIST1H3AP68431 NIPSNAP2-205ENST00000446778 1882 ntTSL 2 BASIC19.5■□□□□ 0.71
HIST1H3AP68431 BMP6-201ENST00000283147 2780 ntAPPRIS P1 TSL 1 (best) BASIC19.49■□□□□ 0.71
HIST1H3AP68431 WT1-204ENST00000448076 2114 ntAPPRIS ALT2 TSL 2 BASIC19.49■□□□□ 0.71
HIST1H3AP68431 COMT-206ENST00000407537 1457 ntAPPRIS P3 TSL 5 BASIC19.49■□□□□ 0.71
HIST1H3AP68431 CRYAA-201ENST00000291554 1139 ntAPPRIS P1 TSL 1 (best) BASIC19.49■□□□□ 0.71
HIST1H3AP68431 DTWD2-204ENST00000515439 1275 ntTSL 5 BASIC19.49■□□□□ 0.71
HIST1H3AP68431 TRIR-205ENST00000592273 783 ntTSL 3 BASIC19.49■□□□□ 0.71
HIST1H3AP68431 NKILA-201ENST00000613231 537 ntTSL 4 BASIC19.49■□□□□ 0.71
HIST1H3AP68431 C17orf82-201ENST00000623772 1530 ntBASIC19.49■□□□□ 0.71
HIST1H3AP68431 NANOS2-201ENST00000341294 1657 ntAPPRIS P1 BASIC19.49■□□□□ 0.71
HIST1H3AP68431 OLIG1-201ENST00000382348 2277 ntAPPRIS P1 BASIC19.49■□□□□ 0.71
HIST1H3AP68431 C1orf229-201ENST00000623686 2258 ntBASIC19.49■□□□□ 0.71
HIST1H3AP68431 NRG2-201ENST00000289409 2535 ntAPPRIS ALT2 TSL 5 BASIC19.49■□□□□ 0.71
HIST1H3AP68431 HES5-201ENST00000378453 1306 ntAPPRIS P1 TSL 1 (best) BASIC19.49■□□□□ 0.71
HIST1H3AP68431 ADSS-201ENST00000366535 2780 ntAPPRIS P1 TSL 1 (best) BASIC19.49■□□□□ 0.71
HIST1H3AP68431 COG8-201ENST00000562081 1731 ntAPPRIS P1 TSL 5 BASIC19.48■□□□□ 0.71
HIST1H3AP68431 ARHGEF9-204ENST00000374878 2217 ntTSL 1 (best) BASIC19.48■□□□□ 0.71
HIST1H3AP68431 CLDN5-203ENST00000413119 1760 ntTSL 2 BASIC19.48■□□□□ 0.71
HIST1H3AP68431 TGIF1-206ENST00000405385 1689 ntTSL 2 BASIC19.48■□□□□ 0.71
HIST1H3AP68431 POLD2-207ENST00000452185 1659 ntAPPRIS P1 TSL 1 (best) BASIC19.48■□□□□ 0.71
HIST1H3AP68431 C3orf80-201ENST00000326474 2718 ntAPPRIS P1 BASIC19.48■□□□□ 0.71
HIST1H3AP68431 ZDHHC14-204ENST00000414563 3134 ntTSL 1 (best) BASIC19.48■□□□□ 0.71
HIST1H3AP68431 UPF3A-201ENST00000351487 2235 ntTSL 1 (best) BASIC19.48■□□□□ 0.71
HIST1H3AP68431 NAPRT-204ENST00000449291 1965 ntAPPRIS P1 TSL 1 (best) BASIC19.47■□□□□ 0.71
HIST1H3AP68431 KRT16P3-201ENST00000439127 1283 ntBASIC19.47■□□□□ 0.71
HIST1H3AP68431 AC136475.3-202ENST00000534742 812 ntTSL 2 BASIC19.47■□□□□ 0.71
HIST1H3AP68431 CCDC194-202ENST00000636079 705 ntAPPRIS P1 TSL 5 BASIC19.47■□□□□ 0.71
HIST1H3AP68431 FAM53B-201ENST00000280780 1568 ntTSL 1 (best) BASIC19.47■□□□□ 0.71
HIST1H3AP68431 SYT6-209ENST00000610222 1707 ntAPPRIS P1 TSL 5 BASIC19.47■□□□□ 0.71
HIST1H3AP68431 UBALD1-206ENST00000590965 1462 ntTSL 2 BASIC19.47■□□□□ 0.71
HIST1H3AP68431 MAPK12-211ENST00000622558 1779 ntTSL 1 (best) BASIC19.47■□□□□ 0.71
HIST1H3AP68431 FOXP4-203ENST00000373060 5948 ntTSL 5 BASIC19.47■□□□□ 0.71
HIST1H3AP68431 FOXP4-204ENST00000373063 5910 ntTSL 1 (best) BASIC19.47■□□□□ 0.71
HIST1H3AP68431 CCDC9-201ENST00000221922 2093 ntAPPRIS P1 TSL 1 (best) BASIC19.47■□□□□ 0.71
HIST1H3AP68431 PRELID2-201ENST00000334744 2140 ntTSL 2 BASIC19.46■□□□□ 0.71
HIST1H3AP68431 CCDC7-201ENST00000277657 1899 ntAPPRIS P2 TSL 1 (best) BASIC19.46■□□□□ 0.71
HIST1H3AP68431 GMPPB-202ENST00000308388 1582 ntAPPRIS P1 TSL 1 (best) BASIC19.46■□□□□ 0.71
HIST1H3AP68431 AC103702.2-201ENST00000433510 1270 ntTSL 2 BASIC19.46■□□□□ 0.71
HIST1H3AP68431 CFD-202ENST00000592860 809 ntAPPRIS ALT2 TSL 1 (best) BASIC19.46■□□□□ 0.71
HIST1H3AP68431 LYPLA1-201ENST00000316963 2585 ntAPPRIS P1 TSL 1 (best) BASIC19.46■□□□□ 0.71
HIST1H3AP68431 CACNB1-203ENST00000394310 1753 ntAPPRIS ALT1 TSL 1 (best) BASIC19.46■□□□□ 0.71
HIST1H3AP68431 ZDHHC16-203ENST00000353979 1647 ntTSL 1 (best) BASIC19.46■□□□□ 0.71
HIST1H3AP68431 DTNB-210ENST00000407186 2275 ntTSL 5 BASIC19.46■□□□□ 0.71
HIST1H3AP68431 PPAN-201ENST00000253107 1657 ntAPPRIS P1 TSL 1 (best) BASIC19.46■□□□□ 0.71
HIST1H3AP68431 ST7-201ENST00000265437 2899 ntTSL 1 (best) BASIC19.46■□□□□ 0.71
HIST1H3AP68431 CA9-204ENST00000617161 1374 ntTSL 1 (best) BASIC19.45■□□□□ 0.7
HIST1H3AP68431 PKIB-204ENST00000368448 1561 ntAPPRIS P1 TSL 5 BASIC19.45■□□□□ 0.7
HIST1H3AP68431 SPPL2B-211ENST00000614794 1559 ntTSL 1 (best) BASIC19.45■□□□□ 0.7
HIST1H3AP68431 RALB-201ENST00000272519 2344 ntAPPRIS P1 TSL 1 (best) BASIC19.45■□□□□ 0.7
HIST1H3AP68431 FOXO1-201ENST00000379561 5735 ntAPPRIS P1 TSL 1 (best) BASIC19.45■□□□□ 0.7
HIST1H3AP68431 TUBBP5-204ENST00000635438 565 ntTSL 4 BASIC19.45■□□□□ 0.7
HIST1H3AP68431 C14orf80-206ENST00000392527 1476 ntAPPRIS ALT2 TSL 1 (best) BASIC19.45■□□□□ 0.7
HIST1H3AP68431 CABLES1-201ENST00000256925 5002 ntAPPRIS P4 TSL 1 (best) BASIC19.45■□□□□ 0.7
HIST1H3AP68431 CACNA1H-202ENST00000358590 8069 ntAPPRIS ALT2 TSL 5 BASIC19.45■□□□□ 0.7
HIST1H3AP68431 FAM43A-201ENST00000329759 2494 ntAPPRIS P1 BASIC19.45■□□□□ 0.7
HIST1H3AP68431 CADM1-201ENST00000331581 1766 ntTSL 1 (best) BASIC19.44■□□□□ 0.7
HIST1H3AP68431 DOK1-203ENST00000409429 1955 ntTSL 1 (best) BASIC19.44■□□□□ 0.7
HIST1H3AP68431 CMPK2-202ENST00000404168 2042 ntAPPRIS ALT2 TSL 1 (best) BASIC19.44■□□□□ 0.7
HIST1H3AP68431 CORO1A-201ENST00000219150 1803 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
HIST1H3AP68431 AC011498.4-201ENST00000586020 1803 ntAPPRIS P1 TSL 2 BASIC19.44■□□□□ 0.7
HIST1H3AP68431 VGF-203ENST00000611537 1622 ntTSL 5 BASIC19.44■□□□□ 0.7
HIST1H3AP68431 NCK2-201ENST00000233154 2683 ntAPPRIS P1 TSL 5 BASIC19.44■□□□□ 0.7
HIST1H3AP68431 RASSF5-202ENST00000579436 2064 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
HIST1H3AP68431 SLC25A11-201ENST00000225665 1897 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
HIST1H3AP68431 C1QTNF4-201ENST00000302514 1664 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
HIST1H3AP68431 AC004540.2-202ENST00000451264 508 ntTSL 2 BASIC19.44■□□□□ 0.7
HIST1H3AP68431 ERRFI1-204ENST00000474874 479 ntTSL 3 BASIC19.44■□□□□ 0.7
HIST1H3AP68431 ARPC4-208ENST00000498623 942 ntTSL 2 BASIC19.44■□□□□ 0.7
HIST1H3AP68431 ESRRAP2-201ENST00000418437 1549 ntBASIC19.44■□□□□ 0.7
Retrieved 100 of 98,524 protein–RNA pairs in 25 ms