Protein–RNA interactions for Protein: P56645

PER3, Period circadian protein homolog 3, humanhuman

Predictions only

Length 1,201 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PER3P56645 NRIP3-203ENST00000531090 980 ntTSL 2 BASIC20.46■□□□□ 0.87
PER3P56645 AC104564.5-201ENST00000584986 278 ntTSL 3 BASIC20.46■□□□□ 0.87
PER3P56645 AC099791.2-201ENST00000605725 427 ntBASIC20.46■□□□□ 0.87
PER3P56645 AMER2-202ENST00000515384 3197 ntAPPRIS P1 BASIC20.46■□□□□ 0.87
PER3P56645 ASRGL1-202ENST00000415229 2270 ntAPPRIS P1 TSL 1 (best) BASIC20.46■□□□□ 0.87
PER3P56645 OSCAR-203ENST00000356532 1355 ntAPPRIS ALT2 TSL 1 (best) BASIC20.46■□□□□ 0.87
PER3P56645 OSCAR-204ENST00000358375 1389 ntAPPRIS ALT2 TSL 1 (best) BASIC20.46■□□□□ 0.87
PER3P56645 OSCAR-210ENST00000616447 1358 ntAPPRIS ALT2 TSL 5 BASIC20.46■□□□□ 0.87
PER3P56645 AUTS2-203ENST00000406775 5950 ntAPPRIS ALT2 TSL 1 (best) BASIC20.46■□□□□ 0.87
PER3P56645 LSR-205ENST00000427250 1606 ntTSL 2 BASIC20.45■□□□□ 0.87
PER3P56645 ST3GAL5-231ENST00000639119 2131 ntTSL 5 BASIC20.45■□□□□ 0.86
PER3P56645 APOE-201ENST00000252486 1208 ntAPPRIS P1 TSL 1 (best) BASIC20.45■□□□□ 0.86
PER3P56645 CEP104-201ENST00000378223 1121 ntTSL 1 (best) BASIC20.45■□□□□ 0.86
PER3P56645 AL122058.1-201ENST00000412321 1166 ntTSL 1 (best) BASIC20.45■□□□□ 0.86
PER3P56645 RHOF-204ENST00000537265 699 ntTSL 2 BASIC20.45■□□□□ 0.86
PER3P56645 CSNK1G3-207ENST00000512718 1569 ntTSL 2 BASIC20.45■□□□□ 0.86
PER3P56645 SNCB-201ENST00000310112 1383 ntAPPRIS P1 TSL 1 (best) BASIC20.45■□□□□ 0.86
PER3P56645 SLC4A3-203ENST00000358055 4454 ntAPPRIS P1 TSL 1 (best) BASIC20.45■□□□□ 0.86
PER3P56645 PXK-201ENST00000302779 1974 ntTSL 1 (best) BASIC20.45■□□□□ 0.86
PER3P56645 RCC2-201ENST00000375433 2030 ntAPPRIS P1 TSL 1 (best) BASIC20.44■□□□□ 0.86
PER3P56645 RING1-201ENST00000374656 1752 ntAPPRIS P1 TSL 1 (best) BASIC20.44■□□□□ 0.86
PER3P56645 SLC52A2-202ENST00000402965 1777 ntAPPRIS P1 TSL 2 BASIC20.44■□□□□ 0.86
PER3P56645 JTB-203ENST00000368589 1216 ntTSL 2 BASIC20.44■□□□□ 0.86
PER3P56645 AC116614.1-201ENST00000456949 539 ntTSL 2 BASIC20.44■□□□□ 0.86
PER3P56645 AC090192.1-201ENST00000517740 490 ntBASIC20.44■□□□□ 0.86
PER3P56645 SIRT3-215ENST00000532956 1235 ntTSL 2 BASIC20.44■□□□□ 0.86
PER3P56645 RARRES2P11-201ENST00000635158 484 ntBASIC20.44■□□□□ 0.86
PER3P56645 C19orf12-204ENST00000392276 1912 ntTSL 1 (best) BASIC20.44■□□□□ 0.86
PER3P56645 FBXW5-201ENST00000325285 2274 ntAPPRIS P1 TSL 1 (best) BASIC20.44■□□□□ 0.86
PER3P56645 NR2F1-AS1-214ENST00000607831 1963 ntTSL 2 BASIC20.44■□□□□ 0.86
PER3P56645 HYAL2-207ENST00000442581 2318 ntAPPRIS P1 TSL 2 BASIC20.44■□□□□ 0.86
PER3P56645 C8orf58-201ENST00000289989 2016 ntAPPRIS P3 TSL 5 BASIC20.44■□□□□ 0.86
PER3P56645 NKX6-3-201ENST00000518699 1352 ntAPPRIS P1 TSL 5 BASIC20.44■□□□□ 0.86
PER3P56645 SLC25A42-201ENST00000318596 3120 ntAPPRIS P1 TSL 1 (best) BASIC20.44■□□□□ 0.86
PER3P56645 FAM124A-201ENST00000280057 2104 ntTSL 2 BASIC20.44■□□□□ 0.86
PER3P56645 AMZ2-219ENST00000612294 1498 ntAPPRIS P1 TSL 1 (best) BASIC20.43■□□□□ 0.86
PER3P56645 RIMKLB-205ENST00000535829 2236 ntAPPRIS P1 TSL 2 BASIC20.43■□□□□ 0.86
PER3P56645 SCTR-201ENST00000019103 1865 ntAPPRIS P1 TSL 1 (best) BASIC20.43■□□□□ 0.86
PER3P56645 AC131274.2-201ENST00000580697 1507 ntBASIC20.43■□□□□ 0.86
PER3P56645 HSF4-225ENST00000584272 1549 ntTSL 1 (best) BASIC20.43■□□□□ 0.86
PER3P56645 ARHGAP29-202ENST00000370217 2043 ntTSL 1 (best) BASIC20.43■□□□□ 0.86
PER3P56645 SPI1-201ENST00000227163 1168 ntAPPRIS ALT1 TSL 2 BASIC20.43■□□□□ 0.86
PER3P56645 CREB3L2-203ENST00000452463 1105 ntTSL 1 (best) BASIC20.43■□□□□ 0.86
PER3P56645 AC080013.1-202ENST00000465477 674 ntTSL 5 BASIC20.43■□□□□ 0.86
PER3P56645 C1QTNF5-203ENST00000530681 1046 ntAPPRIS P1 TSL 1 (best) BASIC20.43■□□□□ 0.86
PER3P56645 KCNMA1-224ENST00000618048 1269 ntTSL 1 (best) BASIC20.43■□□□□ 0.86
PER3P56645 AC241377.3-202ENST00000626088 1088 ntBASIC20.43■□□□□ 0.86
PER3P56645 AC241585.3-202ENST00000628937 1088 ntBASIC20.43■□□□□ 0.86
PER3P56645 AC245100.8-202ENST00000629247 1058 ntBASIC20.43■□□□□ 0.86
PER3P56645 PHACTR2-208ENST00000440869 2569 ntAPPRIS ALT2 TSL 2 BASIC20.43■□□□□ 0.86
PER3P56645 UBTD1-201ENST00000370664 1706 ntAPPRIS P1 TSL 1 (best) BASIC20.43■□□□□ 0.86
PER3P56645 CDR2-201ENST00000268383 2702 ntAPPRIS P1 TSL 1 (best) BASIC20.43■□□□□ 0.86
PER3P56645 ECHDC1-203ENST00000368291 1354 ntTSL 2 BASIC20.43■□□□□ 0.86
PER3P56645 KBTBD13-201ENST00000432196 1377 ntAPPRIS P1 BASIC20.43■□□□□ 0.86
PER3P56645 PTOV1-201ENST00000391842 1875 ntAPPRIS P1 TSL 5 BASIC20.43■□□□□ 0.86
PER3P56645 SLC35D3-201ENST00000331858 2359 ntAPPRIS P1 TSL 1 (best) BASIC20.43■□□□□ 0.86
PER3P56645 PNLIPRP2-205ENST00000611850 1407 ntTSL 5 BASIC20.43■□□□□ 0.86
PER3P56645 SRPK3-205ENST00000393786 1900 ntAPPRIS ALT2 TSL 1 (best) BASIC20.43■□□□□ 0.86
PER3P56645 ZBTB45-205ENST00000600990 2159 ntAPPRIS P1 TSL 5 BASIC20.42■□□□□ 0.86
PER3P56645 BIN1-206ENST00000352848 2209 ntTSL 1 (best) BASIC20.42■□□□□ 0.86
PER3P56645 FNTA-201ENST00000302279 1840 ntAPPRIS P1 TSL 1 (best) BASIC20.42■□□□□ 0.86
PER3P56645 TMEM51-205ENST00000434578 1861 ntTSL 1 (best) BASIC20.42■□□□□ 0.86
PER3P56645 NDUFB2-201ENST00000247866 504 ntAPPRIS P1 TSL 1 (best) BASIC20.42■□□□□ 0.86
PER3P56645 PYCARD-AS1-201ENST00000561916 1095 ntTSL 2 BASIC20.42■□□□□ 0.86
PER3P56645 IMPA2-212ENST00000625802 500 ntTSL 2 BASIC20.42■□□□□ 0.86
PER3P56645 PYGO2-201ENST00000368456 1306 ntTSL 2 BASIC20.42■□□□□ 0.86
PER3P56645 ENKD1-206ENST00000602644 1353 ntTSL 5 BASIC20.42■□□□□ 0.86
PER3P56645 ARX-201ENST00000379044 2876 ntAPPRIS P1 TSL 1 (best) BASIC20.42■□□□□ 0.86
PER3P56645 RPP38-207ENST00000616640 1537 ntAPPRIS P1 TSL 2 BASIC20.42■□□□□ 0.86
PER3P56645 HSPBP1-202ENST00000433386 1572 ntAPPRIS P1 TSL 1 (best) BASIC20.42■□□□□ 0.86
PER3P56645 ATP9A-202ENST00000338821 8106 ntAPPRIS P1 TSL 1 (best) BASIC20.41■□□□□ 0.86
PER3P56645 HDGFL2-210ENST00000621835 2255 ntAPPRIS ALT2 TSL 1 (best) BASIC20.41■□□□□ 0.86
PER3P56645 AL136090.1-201ENST00000446849 366 ntTSL 3 BASIC20.41■□□□□ 0.86
PER3P56645 RPLP2-207ENST00000530797 637 ntAPPRIS P1 TSL 1 (best) BASIC20.41■□□□□ 0.86
PER3P56645 AES-207ENST00000586839 942 ntTSL 1 (best) BASIC20.41■□□□□ 0.86
PER3P56645 MPST-208ENST00000628507 698 ntTSL 5 BASIC20.41■□□□□ 0.86
PER3P56645 TMEM259-202ENST00000356663 2748 ntAPPRIS ALT2 TSL 1 (best) BASIC20.41■□□□□ 0.86
PER3P56645 CADPS-219ENST00000612439 5455 ntTSL 1 (best) BASIC20.41■□□□□ 0.86
PER3P56645 ASAP2-201ENST00000281419 5712 ntAPPRIS P3 TSL 1 (best) BASIC20.41■□□□□ 0.86
PER3P56645 ARL6IP4-210ENST00000453766 1491 ntAPPRIS ALT2 TSL 1 (best) BASIC20.41■□□□□ 0.86
PER3P56645 SIGMAR1-201ENST00000277010 1656 ntAPPRIS P1 TSL 1 (best) BASIC20.41■□□□□ 0.86
PER3P56645 CCDC92-209ENST00000545891 1790 ntAPPRIS P1 TSL 2 BASIC20.41■□□□□ 0.86
PER3P56645 AL357033.1-201ENST00000370520 1933 ntTSL 2 BASIC20.41■□□□□ 0.86
PER3P56645 KRT72-201ENST00000293745 2015 ntAPPRIS P1 TSL 1 (best) BASIC20.41■□□□□ 0.86
PER3P56645 TRAP1-202ENST00000538171 2052 ntTSL 2 BASIC20.41■□□□□ 0.86
PER3P56645 WHAMM-201ENST00000286760 5101 ntAPPRIS P1 TSL 1 (best) BASIC20.4■□□□□ 0.86
PER3P56645 DNAJB11-201ENST00000265028 1688 ntAPPRIS P1 TSL 1 (best) BASIC20.4■□□□□ 0.86
PER3P56645 PLPP2-202ENST00000327790 1397 ntTSL 5 BASIC20.4■□□□□ 0.86
PER3P56645 MRPL10-202ENST00000351111 1725 ntAPPRIS P1 TSL 1 (best) BASIC20.4■□□□□ 0.86
PER3P56645 SLC35B2-202ENST00000393812 2043 ntAPPRIS P1 TSL 1 (best) BASIC20.4■□□□□ 0.86
PER3P56645 ASB1-202ENST00000409297 878 ntTSL 5 BASIC20.4■□□□□ 0.86
PER3P56645 HES6-206ENST00000409574 738 ntTSL 2 BASIC20.4■□□□□ 0.86
PER3P56645 MELTF-AS1-202ENST00000415244 951 ntTSL 1 (best) BASIC20.4■□□□□ 0.86
PER3P56645 MYCBPAP-202ENST00000419930 1640 ntAPPRIS ALT2 TSL 1 (best) BASIC20.4■□□□□ 0.86
PER3P56645 AC007009.1-201ENST00000458624 429 ntTSL 2 BASIC20.4■□□□□ 0.86
PER3P56645 LINC01942-201ENST00000521373 513 ntTSL 4 BASIC20.4■□□□□ 0.86
PER3P56645 AC138932.3-201ENST00000567634 1902 ntBASIC20.4■□□□□ 0.86
PER3P56645 DIRAS1-202ENST00000585334 774 ntAPPRIS P1 BASIC20.4■□□□□ 0.86
PER3P56645 AC136469.2-201ENST00000623944 1028 ntBASIC20.4■□□□□ 0.86
PER3P56645 ARHGAP27-207ENST00000528273 2319 ntTSL 1 (best) BASIC20.39■□□□□ 0.86
Retrieved 100 of 98,524 protein–RNA pairs in 47.8 ms