Protein–RNA interactions for Protein: P52926

HMGA2, High mobility group protein HMGI-C, humanhuman

Predictions only

Length 109 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HMGA2P52926 CACNB1-203ENST00000394310 1753 ntAPPRIS ALT1 TSL 1 (best) BASIC20.46■□□□□ 0.87
HMGA2P52926 BRWD1-202ENST00000341322 2495 ntTSL 1 (best) BASIC20.46■□□□□ 0.87
HMGA2P52926 GPR137B-202ENST00000366592 2042 ntAPPRIS P2 TSL 1 (best) BASIC20.46■□□□□ 0.87
HMGA2P52926 TANGO2-210ENST00000432883 2084 ntTSL 2 BASIC20.46■□□□□ 0.87
HMGA2P52926 TMEM230-205ENST00000379279 1636 ntAPPRIS P1 TSL 2 BASIC20.45■□□□□ 0.87
HMGA2P52926 PDE5A-201ENST00000264805 3020 ntAPPRIS ALT2 TSL 1 (best) BASIC20.45■□□□□ 0.87
HMGA2P52926 C1orf35-201ENST00000272139 1427 ntAPPRIS P1 TSL 1 (best) BASIC20.45■□□□□ 0.86
HMGA2P52926 AC087742.1-201ENST00000575880 1738 ntBASIC20.45■□□□□ 0.86
HMGA2P52926 TRIM54-202ENST00000380075 1967 ntAPPRIS P1 TSL 1 (best) BASIC20.45■□□□□ 0.86
HMGA2P52926 PDLIM2-216ENST00000464275 1995 ntTSL 2 BASIC20.45■□□□□ 0.86
HMGA2P52926 HSF4-225ENST00000584272 1549 ntTSL 1 (best) BASIC20.45■□□□□ 0.86
HMGA2P52926 CDCA5-202ENST00000404147 1012 ntTSL 2 BASIC20.45■□□□□ 0.86
HMGA2P52926 AL590677.1-201ENST00000438431 380 ntTSL 5 BASIC20.45■□□□□ 0.86
HMGA2P52926 MCRIP1-210ENST00000576431 577 ntTSL 5 BASIC20.45■□□□□ 0.86
HMGA2P52926 AC116025.2-201ENST00000576632 443 ntTSL 3 BASIC20.45■□□□□ 0.86
HMGA2P52926 MIR4281-201ENST00000580852 62 ntBASIC20.45■□□□□ 0.86
HMGA2P52926 REEP5-202ENST00000379638 3326 ntAPPRIS P1 TSL 1 (best) BASIC20.45■□□□□ 0.86
HMGA2P52926 SIGLEC15-201ENST00000389474 1573 ntAPPRIS P1 TSL 1 (best) BASIC20.45■□□□□ 0.86
HMGA2P52926 MPST-202ENST00000397225 2116 ntAPPRIS P1 TSL 2 BASIC20.45■□□□□ 0.86
HMGA2P52926 PLPP5-203ENST00000424479 2130 ntAPPRIS P1 TSL 1 (best) BASIC20.45■□□□□ 0.86
HMGA2P52926 PICK1-202ENST00000404072 2164 ntAPPRIS P1 TSL 2 BASIC20.45■□□□□ 0.86
HMGA2P52926 JAGN1-201ENST00000307768 1693 ntAPPRIS P1 TSL 1 (best) BASIC20.45■□□□□ 0.86
HMGA2P52926 RASSF5-202ENST00000579436 2064 ntAPPRIS P1 TSL 1 (best) BASIC20.44■□□□□ 0.86
HMGA2P52926 YWHAZ-205ENST00000395956 2974 ntAPPRIS P1 TSL 1 (best) BASIC20.44■□□□□ 0.86
HMGA2P52926 TMEM44-211ENST00000473092 1508 ntTSL 1 (best) BASIC20.44■□□□□ 0.86
HMGA2P52926 CTDSPL-206ENST00000443503 4640 ntAPPRIS ALT1 TSL 1 (best) BASIC20.44■□□□□ 0.86
HMGA2P52926 CACNB1-201ENST00000344140 1889 ntTSL 1 (best) BASIC20.44■□□□□ 0.86
HMGA2P52926 DHRS11-215ENST00000618403 1598 ntAPPRIS P1 TSL 1 (best) BASIC20.44■□□□□ 0.86
HMGA2P52926 ARL13B-205ENST00000471138 2206 ntAPPRIS P1 TSL 1 (best) BASIC20.44■□□□□ 0.86
HMGA2P52926 AL121899.1-202ENST00000411839 536 ntTSL 5 BASIC20.44■□□□□ 0.86
HMGA2P52926 THA1P-201ENST00000590384 1145 ntBASIC20.44■□□□□ 0.86
HMGA2P52926 POU4F1-201ENST00000377208 4547 ntAPPRIS P1 TSL 1 (best) BASIC20.44■□□□□ 0.86
HMGA2P52926 MYCN-201ENST00000281043 2602 ntAPPRIS P1 TSL 5 BASIC20.44■□□□□ 0.86
HMGA2P52926 VSX1-205ENST00000429762 1977 ntTSL 1 (best) BASIC20.44■□□□□ 0.86
HMGA2P52926 RITA1-202ENST00000549621 2041 ntAPPRIS P1 TSL 2 BASIC20.44■□□□□ 0.86
HMGA2P52926 NKX6-3-201ENST00000518699 1352 ntAPPRIS P1 TSL 5 BASIC20.44■□□□□ 0.86
HMGA2P52926 CDKN1C-202ENST00000414822 2051 ntAPPRIS P3 TSL 1 (best) BASIC20.44■□□□□ 0.86
HMGA2P52926 VGLL3-201ENST00000383698 2475 ntAPPRIS ALT2 TSL 1 (best) BASIC20.44■□□□□ 0.86
HMGA2P52926 LSM14B-201ENST00000279068 2548 ntAPPRIS P1 TSL 5 BASIC20.44■□□□□ 0.86
HMGA2P52926 TMEM259-202ENST00000356663 2748 ntAPPRIS ALT2 TSL 1 (best) BASIC20.43■□□□□ 0.86
HMGA2P52926 CXCL14-201ENST00000337225 1971 ntAPPRIS P2 TSL 1 (best) BASIC20.43■□□□□ 0.86
HMGA2P52926 NRL-203ENST00000397002 1976 ntAPPRIS P1 TSL 1 (best) BASIC20.43■□□□□ 0.86
HMGA2P52926 PITX1-201ENST00000265340 2406 ntAPPRIS P1 TSL 1 (best) BASIC20.43■□□□□ 0.86
HMGA2P52926 SIMC1-202ENST00000341199 2056 ntAPPRIS P3 TSL 2 BASIC20.43■□□□□ 0.86
HMGA2P52926 PRELID1-201ENST00000303204 1261 ntAPPRIS P1 TSL 1 (best) BASIC20.43■□□□□ 0.86
HMGA2P52926 CNPY3-202ENST00000394142 954 ntTSL 5 BASIC20.43■□□□□ 0.86
HMGA2P52926 DUX4-203ENST00000565211 1710 ntAPPRIS P2 TSL 1 (best) BASIC20.43■□□□□ 0.86
HMGA2P52926 DYRK1B-204ENST00000593685 2724 ntAPPRIS P3 TSL 5 BASIC20.43■□□□□ 0.86
HMGA2P52926 MIR222HG-201ENST00000602461 1379 ntTSL 5 BASIC20.43■□□□□ 0.86
HMGA2P52926 AP004608.1-202ENST00000533390 1863 ntTSL 1 (best) BASIC20.43■□□□□ 0.86
HMGA2P52926 HEXB-201ENST00000261416 1901 ntAPPRIS P1 TSL 1 (best) BASIC20.43■□□□□ 0.86
HMGA2P52926 AC080038.3-201ENST00000623346 1952 ntBASIC20.43■□□□□ 0.86
HMGA2P52926 CNEP1R1-202ENST00000427478 2117 ntAPPRIS P1 TSL 1 (best) BASIC20.42■□□□□ 0.86
HMGA2P52926 CDC20-202ENST00000372462 1777 ntAPPRIS P1 TSL 1 (best) BASIC20.42■□□□□ 0.86
HMGA2P52926 SLC18A3-201ENST00000374115 2420 ntAPPRIS P1 BASIC20.42■□□□□ 0.86
HMGA2P52926 DPH7-201ENST00000277540 1847 ntAPPRIS P1 TSL 1 (best) BASIC20.42■□□□□ 0.86
HMGA2P52926 PLA2G10-201ENST00000438167 1000 ntAPPRIS P1 TSL 1 (best) BASIC20.42■□□□□ 0.86
HMGA2P52926 AC074183.2-201ENST00000623112 922 ntBASIC20.42■□□□□ 0.86
HMGA2P52926 CCDC106-205ENST00000588740 1404 ntAPPRIS P1 TSL 1 (best) BASIC20.42■□□□□ 0.86
HMGA2P52926 RAP1B-207ENST00000450214 1466 ntTSL 2 BASIC20.42■□□□□ 0.86
HMGA2P52926 BLOC1S4-201ENST00000320776 1617 ntAPPRIS P1 BASIC20.42■□□□□ 0.86
HMGA2P52926 AC144652.1-201ENST00000609974 1624 ntBASIC20.42■□□□□ 0.86
HMGA2P52926 ABCG4-204ENST00000615496 2459 ntAPPRIS P1 TSL 2 BASIC20.42■□□□□ 0.86
HMGA2P52926 SLCO3A1-201ENST00000318445 5115 ntAPPRIS P1 TSL 1 (best) BASIC20.41■□□□□ 0.86
HMGA2P52926 HOMER3-207ENST00000594794 903 ntTSL 5 BASIC20.41■□□□□ 0.86
HMGA2P52926 ERO1A-211ENST00000629528 998 ntTSL 5 BASIC20.41■□□□□ 0.86
HMGA2P52926 EGFL8-220ENST00000395512 1312 ntAPPRIS P1 TSL 1 (best) BASIC20.41■□□□□ 0.86
HMGA2P52926 MARCH2-201ENST00000215555 1376 ntAPPRIS P1 TSL 5 BASIC20.41■□□□□ 0.86
HMGA2P52926 DNAJC25-GNG10-201ENST00000374294 1448 ntAPPRIS P1 TSL 2 BASIC20.41■□□□□ 0.86
HMGA2P52926 ASCC1-204ENST00000394915 1510 ntTSL 5 BASIC20.41■□□□□ 0.86
HMGA2P52926 RANBP10-202ENST00000448631 2232 ntTSL 2 BASIC20.41■□□□□ 0.86
HMGA2P52926 XBP1-201ENST00000216037 1850 ntAPPRIS P2 TSL 1 (best) BASIC20.4■□□□□ 0.86
HMGA2P52926 UHRF1BP1L-202ENST00000356828 2023 ntAPPRIS ALT2 TSL 1 (best) BASIC20.4■□□□□ 0.86
HMGA2P52926 NDUFA10-204ENST00000407129 699 ntTSL 1 (best) BASIC20.4■□□□□ 0.86
HMGA2P52926 H2AFY-204ENST00000423969 924 ntTSL 2 BASIC20.4■□□□□ 0.86
HMGA2P52926 EFS-203ENST00000429593 2610 ntTSL 2 BASIC20.4■□□□□ 0.86
HMGA2P52926 CT47A7-201ENST00000434883 1288 ntAPPRIS P1 TSL 2 BASIC20.4■□□□□ 0.86
HMGA2P52926 GATA4-207ENST00000532059 1459 ntAPPRIS ALT1 TSL 1 (best) BASIC20.4■□□□□ 0.86
HMGA2P52926 AC148477.1-201ENST00000537720 476 ntTSL 3 BASIC20.4■□□□□ 0.86
HMGA2P52926 DUX4L18-201ENST00000553347 1267 ntBASIC20.4■□□□□ 0.86
HMGA2P52926 TMEM170A-206ENST00000569276 609 ntTSL 2 BASIC20.4■□□□□ 0.86
HMGA2P52926 BID-212ENST00000614949 1988 ntTSL 5 BASIC20.4■□□□□ 0.86
HMGA2P52926 AC064853.2-201ENST00000641246 144 ntAPPRIS P1 BASIC20.4■□□□□ 0.86
HMGA2P52926 SERPINB5-201ENST00000382771 2783 ntAPPRIS P1 TSL 1 (best) BASIC20.4■□□□□ 0.86
HMGA2P52926 CRHR1-202ENST00000314537 2535 ntAPPRIS P1 TSL 1 (best) BASIC20.4■□□□□ 0.86
HMGA2P52926 DMPK-220ENST00000618091 2503 ntTSL 1 (best) BASIC20.4■□□□□ 0.86
HMGA2P52926 CTGF-201ENST00000367976 2339 ntAPPRIS P1 TSL 1 (best) BASIC20.39■□□□□ 0.86
HMGA2P52926 P4HTM-201ENST00000343546 2268 ntTSL 1 (best) BASIC20.39■□□□□ 0.86
HMGA2P52926 ZCCHC2-201ENST00000269499 5959 ntAPPRIS P2 TSL 5 BASIC20.39■□□□□ 0.86
HMGA2P52926 SLC22A31-201ENST00000562855 1909 ntAPPRIS P1 TSL 5 BASIC20.39■□□□□ 0.86
HMGA2P52926 IQCJ-SCHIP1-203ENST00000476809 1780 ntAPPRIS ALT2 TSL 5 BASIC20.39■□□□□ 0.86
HMGA2P52926 AC145124.1-201ENST00000528514 1361 ntTSL 2 BASIC20.39■□□□□ 0.85
HMGA2P52926 APOE-201ENST00000252486 1208 ntAPPRIS P1 TSL 1 (best) BASIC20.39■□□□□ 0.85
HMGA2P52926 PTCH1-210ENST00000468211 1254 ntTSL 1 (best) BASIC20.39■□□□□ 0.85
HMGA2P52926 HSD17B1P1-201ENST00000590052 955 ntBASIC20.39■□□□□ 0.85
HMGA2P52926 VGF-202ENST00000445482 2477 ntAPPRIS P1 TSL 5 BASIC20.38■□□□□ 0.85
HMGA2P52926 ASRGL1-201ENST00000301776 2182 ntAPPRIS P1 TSL 1 (best) BASIC20.38■□□□□ 0.85
HMGA2P52926 TMEM9B-205ENST00000534025 2083 ntAPPRIS P1 TSL 1 (best) BASIC20.38■□□□□ 0.85
HMGA2P52926 MT2A-201ENST00000245185 786 ntAPPRIS P1 TSL 1 (best) BASIC20.38■□□□□ 0.85
HMGA2P52926 COPRS-201ENST00000302362 968 ntAPPRIS P1 TSL 1 (best) BASIC20.38■□□□□ 0.85
Retrieved 100 of 98,524 protein–RNA pairs in 35 ms