Protein–RNA interactions for Protein: P40356

PGD1, Mediator of RNA polymerase II transcription subunit 3, yeastyeast

Predictions only

Length 397 aa.

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Protein RNA Prediction (catRAPID) Interaction (RIP-Chip)
Gene UniProt Accession Gene Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score Detected Interaction
PGD1P40356 tQ(UUG)E1tQ(UUG)E1 72 nt3.56□□□□□ -1.84
PGD1P40356 tQ(UUG)HtQ(UUG)H 72 nt3.56□□□□□ -1.84
PGD1P40356 tQ(UUG)LtQ(UUG)L 72 nt3.56□□□□□ -1.84
PGD1P40356 YNG2YHR090C 849 nt3.56□□□□□ -1.84
PGD1P40356 COX2Q0250 756 nt3.56□□□□□ -1.84
PGD1P40356 YPL114WYPL114W 420 nt3.56□□□□□ -1.84
PGD1P40356 GDT1YBR187W 843 nt3.56□□□□□ -1.84
PGD1P40356 RAD26YJR035W 3258 nt3.56□□□□□ -1.84
PGD1P40356 PPZ1YML016C 2079 nt3.56□□□□□ -1.84
PGD1P40356 CDC6YJL194W 1542 nt3.55□□□□□ -1.84
PGD1P40356 JHD2YJR119C 2187 nt3.55□□□□□ -1.84
PGD1P40356 SER33YIL074C 1410 nt3.55□□□□□ -1.84
PGD1P40356 CEG1YGL130W 1380 nt3.55□□□□□ -1.84
PGD1P40356 ARP10YDR106W 855 nt3.55□□□□□ -1.84
PGD1P40356 YDR526CYDR526C 471 nt3.55□□□□□ -1.84
PGD1P40356 UBC6YER100W 753 nt3.55□□□□□ -1.84
PGD1P40356 SOP4YJL192C 705 nt3.55□□□□□ -1.84
PGD1P40356 NTR2YKR022C 969 nt3.55□□□□□ -1.84
PGD1P40356 NIS1YNL078W 1224 nt3.55□□□□□ -1.84
PGD1P40356 snR3snR3 194 nt3.55□□□□□ -1.84
PGD1P40356 MCM7YBR202W 2538 nt3.55□□□□□ -1.84
PGD1P40356 SWH1YAR042W 3567 nt3.55□□□□□ -1.84
PGD1P40356 MCD4YKL165C 2760 nt3.55□□□□□ -1.84
PGD1P40356 LAS1YKR063C 1509 nt3.54□□□□□ -1.84
PGD1P40356 AVT7YIL088C 1473 nt3.54□□□□□ -1.84
PGD1P40356 GPI10YGL142C 1851 nt3.54□□□□□ -1.84
PGD1P40356 SMP1YBR182C 1359 nt3.54□□□□□ -1.84
PGD1P40356 PRP11YDL043C 801 nt3.54□□□□□ -1.84
PGD1P40356 PNG1YPL096W 1092 nt3.54□□□□□ -1.84
PGD1P40356 MRPS9YBR146W 837 nt3.54□□□□□ -1.84
PGD1P40356 ATM1YMR301C 2073 nt3.53□□□□□ -1.84
PGD1P40356 MST1YKL194C 1389 nt3.53□□□□□ -1.84
PGD1P40356 RPN5YDL147W 1338 nt3.53□□□□□ -1.84
PGD1P40356 ALG6YOR002W 1635 nt3.53□□□□□ -1.84
PGD1P40356 SEG1YMR086W 2883 nt3.53□□□□□ -1.84
PGD1P40356 NBP2YDR162C 711 nt3.53□□□□□ -1.84
PGD1P40356 VPS29YHR012W 849 nt3.53□□□□□ -1.84
PGD1P40356 MAD2YJL030W 591 nt3.53□□□□□ -1.84
PGD1P40356 OSW5YMR148W 447 nt3.53□□□□□ -1.84
PGD1P40356 SPS19YNL202W 879 nt3.53□□□□□ -1.84
PGD1P40356 YOR034C-AYOR034C-A 243 nt3.53□□□□□ -1.84
PGD1P40356 EFM2YBR271W 1260 nt3.53□□□□□ -1.84
PGD1P40356 SPT6YGR116W 4356 nt3.53□□□□□ -1.84
PGD1P40356 NCR1YPL006W 3513 nt3.53□□□□□ -1.84
PGD1P40356 HCA4YJL033W 2313 nt3.53□□□□□ -1.84
PGD1P40356 KRE29YER038C 1395 nt3.52□□□□□ -1.85
PGD1P40356 ELF1YKL160W 438 nt3.52□□□□□ -1.85
PGD1P40356 RRT7YLL030C 342 nt3.52□□□□□ -1.85
PGD1P40356 SEC72YLR292C 582 nt3.52□□□□□ -1.85
PGD1P40356 YMR086C-AYMR086C-A 339 nt3.52□□□□□ -1.85
PGD1P40356 PRE7YBL041W 726 nt3.52□□□□□ -1.85
PGD1P40356 FRM2YCL026C-A 582 nt3.52□□□□□ -1.85
PGD1P40356 MMT1YMR177W 1533 nt3.52□□□□□ -1.85
PGD1P40356 RIM4YHL024W 2142 nt3.52□□□□□ -1.85
PGD1P40356 MNN4YKL201C 3537 nt3.52□□□□□ -1.85
PGD1P40356 YGL132WYGL132W 336 nt3.51□□□□□ -1.85
PGD1P40356 FMP48YGR052W 1110 nt3.51□□□□□ -1.85
PGD1P40356 YMR114CYMR114C 1107 nt3.51□□□□□ -1.85
PGD1P40356 BRE4YDL231C 3378 nt3.5□□□□□ -1.85
PGD1P40356 KRE5YOR336W 4098 nt3.5□□□□□ -1.85
PGD1P40356 MMR1YLR190W 1476 nt3.5□□□□□ -1.85
PGD1P40356 RNA14YMR061W 2034 nt3.5□□□□□ -1.85
PGD1P40356 LAP2YNL045W 2016 nt3.5□□□□□ -1.85
PGD1P40356 YER076CYER076C 909 nt3.5□□□□□ -1.85
PGD1P40356 tS(AGA)D3tS(AGA)D3 83 nt3.5□□□□□ -1.85
PGD1P40356 YHR112CYHR112C 1137 nt3.5□□□□□ -1.85
PGD1P40356 AIR1YIL079C 1083 nt3.5□□□□□ -1.85
PGD1P40356 APS1YLR170C 471 nt3.5□□□□□ -1.85
PGD1P40356 YOL035CYOL035C 303 nt3.5□□□□□ -1.85
PGD1P40356 XRS2YDR369C 2565 nt3.5□□□□□ -1.85
PGD1P40356 YJR015WYJR015W 1533 nt3.49□□□□□ -1.85
PGD1P40356 STU1YBL034C 4542 nt3.49□□□□□ -1.85
PGD1P40356 SLM5YCR024C 1479 nt3.49□□□□□ -1.85
PGD1P40356 YGR291CYGR291C 222 nt3.49□□□□□ -1.85
PGD1P40356 CKB2YOR039W 777 nt3.49□□□□□ -1.85
PGD1P40356 YBR196C-BYBR196C-B 105 nt3.49□□□□□ -1.85
PGD1P40356 YBR298C-AYBR298C-A 222 nt3.49□□□□□ -1.85
PGD1P40356 YRM1YOR172W 2361 nt3.49□□□□□ -1.85
PGD1P40356 YIL001WYIL001W 1542 nt3.49□□□□□ -1.85
PGD1P40356 RAD54YGL163C 2697 nt3.48□□□□□ -1.85
PGD1P40356 GAD1YMR250W 1758 nt3.48□□□□□ -1.85
PGD1P40356 DIT1YDR403W 1611 nt3.48□□□□□ -1.85
PGD1P40356 ACE2YLR131C 2313 nt3.48□□□□□ -1.85
PGD1P40356 VPS36YLR417W 1701 nt3.48□□□□□ -1.85
PGD1P40356 GCD1YOR260W 1737 nt3.48□□□□□ -1.85
PGD1P40356 OCA4YCR095C 1089 nt3.48□□□□□ -1.85
PGD1P40356 NUS1YDL193W 1128 nt3.48□□□□□ -1.85
PGD1P40356 SNM1YDR478W 597 nt3.48□□□□□ -1.85
PGD1P40356 PIC2YER053C 903 nt3.48□□□□□ -1.85
PGD1P40356 FMP10YER182W 735 nt3.48□□□□□ -1.85
PGD1P40356 TYW3YGL050W 822 nt3.48□□□□□ -1.85
PGD1P40356 YGL108CYGL108C 423 nt3.48□□□□□ -1.85
PGD1P40356 ECM34YHL043W 513 nt3.48□□□□□ -1.85
PGD1P40356 SAP30YMR263W 606 nt3.48□□□□□ -1.85
PGD1P40356 ELA1YNL230C 1140 nt3.48□□□□□ -1.85
PGD1P40356 YGL036WYGL036W 2730 nt3.48□□□□□ -1.85
PGD1P40356 ALR2YFL050C 2577 nt3.48□□□□□ -1.85
PGD1P40356 GSH2YOL049W 1476 nt3.47□□□□□ -1.85
PGD1P40356 TAF6YGL112C 1551 nt3.47□□□□□ -1.85
PGD1P40356 ZDS1YMR273C 2748 nt3.47□□□□□ -1.85
Retrieved 100 of 7,029 protein–RNA pairs in 14.3 ms