Protein–RNA interactions for Protein: P0C091

FREM3, FRAS1-related extracellular matrix protein 3, humanhuman

Predictions only

Length 2,139 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
FREM3P0C091 GRK4-202ENST00000398051 2068 ntTSL 1 (best) BASIC20.32■□□□□ 0.84
FREM3P0C091 ST3GAL4-213ENST00000530591 1459 ntAPPRIS P3 TSL 1 (best) BASIC20.32■□□□□ 0.84
FREM3P0C091 LDB1-201ENST00000361198 2285 ntAPPRIS P1 TSL 1 (best) BASIC20.32■□□□□ 0.84
FREM3P0C091 ZDHHC14-204ENST00000414563 3134 ntTSL 1 (best) BASIC20.32■□□□□ 0.84
FREM3P0C091 MRPL41-201ENST00000371443 1262 ntAPPRIS P1 TSL 1 (best) BASIC20.32■□□□□ 0.84
FREM3P0C091 CDKN2A-210ENST00000530628 748 ntAPPRIS P1 TSL 5 BASIC20.32■□□□□ 0.84
FREM3P0C091 NRIP3-203ENST00000531090 980 ntTSL 2 BASIC20.32■□□□□ 0.84
FREM3P0C091 MAG-206ENST00000597035 542 ntTSL 4 BASIC20.32■□□□□ 0.84
FREM3P0C091 C14orf80-206ENST00000392527 1476 ntAPPRIS ALT2 TSL 1 (best) BASIC20.32■□□□□ 0.84
FREM3P0C091 LRRC73-201ENST00000372441 2121 ntAPPRIS P1 TSL 1 (best) BASIC20.31■□□□□ 0.84
FREM3P0C091 DLL3-201ENST00000205143 2332 ntTSL 1 (best) BASIC20.31■□□□□ 0.84
FREM3P0C091 HYAL2-207ENST00000442581 2318 ntAPPRIS P1 TSL 2 BASIC20.31■□□□□ 0.84
FREM3P0C091 AGAP3-201ENST00000335367 2675 ntTSL 1 (best) BASIC20.31■□□□□ 0.84
FREM3P0C091 ZC3H14-223ENST00000557607 1983 ntTSL 5 BASIC20.31■□□□□ 0.84
FREM3P0C091 CCDC85B-201ENST00000312579 1524 ntAPPRIS P1 BASIC20.31■□□□□ 0.84
FREM3P0C091 RAP1B-207ENST00000450214 1466 ntTSL 2 BASIC20.31■□□□□ 0.84
FREM3P0C091 P2RX2-202ENST00000348800 1222 ntAPPRIS ALT2 TSL 1 (best) BASIC20.31■□□□□ 0.84
FREM3P0C091 P2RX2-204ENST00000351222 1140 ntTSL 1 (best) BASIC20.31■□□□□ 0.84
FREM3P0C091 CTAG2-202ENST00000369585 748 ntAPPRIS P1 TSL 1 (best) BASIC20.31■□□□□ 0.84
FREM3P0C091 P2RX2-207ENST00000449132 1113 ntTSL 1 (best) BASIC20.31■□□□□ 0.84
FREM3P0C091 AC142381.2-201ENST00000566120 298 ntBASIC20.31■□□□□ 0.84
FREM3P0C091 CAPNS1-207ENST00000589146 578 ntTSL 3 BASIC20.31■□□□□ 0.84
FREM3P0C091 ADAM22-209ENST00000439864 2576 ntTSL 1 (best) BASIC20.31■□□□□ 0.84
FREM3P0C091 BCL2L12-212ENST00000616144 1854 ntAPPRIS P3 TSL 1 (best) BASIC20.31■□□□□ 0.84
FREM3P0C091 GATA3-AS1-201ENST00000355358 2214 ntTSL 2 BASIC20.31■□□□□ 0.84
FREM3P0C091 RAX-201ENST00000256852 2935 ntTSL 1 (best) BASIC20.31■□□□□ 0.84
FREM3P0C091 DAZAP1-201ENST00000233078 2160 ntAPPRIS P2 TSL 1 (best) BASIC20.31■□□□□ 0.84
FREM3P0C091 MYCBPAP-202ENST00000419930 1640 ntAPPRIS ALT2 TSL 1 (best) BASIC20.3■□□□□ 0.84
FREM3P0C091 AC144652.1-201ENST00000609974 1624 ntBASIC20.3■□□□□ 0.84
FREM3P0C091 AC105935.1-201ENST00000424174 422 ntTSL 3 BASIC20.3■□□□□ 0.84
FREM3P0C091 ACAD8-202ENST00000374752 1797 ntTSL 2 BASIC20.3■□□□□ 0.84
FREM3P0C091 AC099805.1-201ENST00000523987 1797 ntTSL 1 (best) BASIC20.3■□□□□ 0.84
FREM3P0C091 ACAA1-219ENST00000625927 1760 ntTSL 5 BASIC20.3■□□□□ 0.84
FREM3P0C091 ARPC5L-201ENST00000259477 1325 ntAPPRIS P1 TSL 1 (best) BASIC20.3■□□□□ 0.84
FREM3P0C091 PYGO2-201ENST00000368456 1306 ntTSL 2 BASIC20.3■□□□□ 0.84
FREM3P0C091 PRADC1-201ENST00000258083 1083 ntAPPRIS P1 TSL 1 (best) BASIC20.3■□□□□ 0.84
FREM3P0C091 PXK-202ENST00000356151 2037 ntAPPRIS P1 TSL 1 (best) BASIC20.3■□□□□ 0.84
FREM3P0C091 B3GALNT2-202ENST00000366600 2015 ntAPPRIS P1 TSL 1 (best) BASIC20.3■□□□□ 0.84
FREM3P0C091 IL20RA-202ENST00000367746 1244 ntTSL 2 BASIC20.3■□□□□ 0.84
FREM3P0C091 DNAJC25-GNG10-201ENST00000374294 1448 ntAPPRIS P1 TSL 2 BASIC20.3■□□□□ 0.84
FREM3P0C091 LGALS9B-202ENST00000423676 1713 ntAPPRIS ALT2 TSL 1 (best) BASIC20.3■□□□□ 0.84
FREM3P0C091 SRD5A1P1-201ENST00000442297 786 ntBASIC20.3■□□□□ 0.84
FREM3P0C091 NIPSNAP2-205ENST00000446778 1882 ntTSL 2 BASIC20.3■□□□□ 0.84
FREM3P0C091 ZNF76-203ENST00000373953 2716 ntAPPRIS P1 TSL 1 (best) BASIC20.3■□□□□ 0.84
FREM3P0C091 TBX1-203ENST00000359500 1538 ntAPPRIS ALT2 TSL 1 (best) BASIC20.3■□□□□ 0.84
FREM3P0C091 FP325331.1-202ENST00000623531 1380 ntBASIC20.3■□□□□ 0.84
FREM3P0C091 CNTFR-201ENST00000351266 1910 ntAPPRIS P1 TSL 1 (best) BASIC20.3■□□□□ 0.84
FREM3P0C091 PLEKHB1-201ENST00000227214 2016 ntAPPRIS ALT1 TSL 1 (best) BASIC20.29■□□□□ 0.84
FREM3P0C091 ACOT1-201ENST00000311148 1713 ntAPPRIS P1 TSL 1 (best) BASIC20.29■□□□□ 0.84
FREM3P0C091 NR2F1-AS1-210ENST00000606739 1431 ntTSL 2 BASIC20.29■□□□□ 0.84
FREM3P0C091 CREB3L2-203ENST00000452463 1105 ntTSL 1 (best) BASIC20.29■□□□□ 0.84
FREM3P0C091 AC007448.3-201ENST00000585193 689 ntTSL 2 BASIC20.29■□□□□ 0.84
FREM3P0C091 SLC35A3-216ENST00000639221 1032 ntTSL 5 BASIC20.29■□□□□ 0.84
FREM3P0C091 PHC2-202ENST00000373418 2550 ntAPPRIS ALT2 TSL 1 (best) BASIC20.29■□□□□ 0.84
FREM3P0C091 MAL2-204ENST00000614891 2818 ntAPPRIS P1 TSL 1 (best) BASIC20.29■□□□□ 0.84
FREM3P0C091 EZH2-208ENST00000483967 2466 ntAPPRIS ALT1 TSL 2 BASIC20.29■□□□□ 0.84
FREM3P0C091 PLPP1-202ENST00000307259 1597 ntAPPRIS ALT1 TSL 1 (best) BASIC20.29■□□□□ 0.84
FREM3P0C091 C15orf61-202ENST00000557807 769 ntTSL 2 BASIC20.29■□□□□ 0.84
FREM3P0C091 C9orf163-202ENST00000624034 2573 ntBASIC20.29■□□□□ 0.84
FREM3P0C091 CYP2A13-201ENST00000330436 1739 ntAPPRIS P1 TSL 1 (best) BASIC20.28■□□□□ 0.84
FREM3P0C091 GET4-201ENST00000265857 2090 ntAPPRIS P2 TSL 1 (best) BASIC20.28■□□□□ 0.84
FREM3P0C091 SIGLEC15-201ENST00000389474 1573 ntAPPRIS P1 TSL 1 (best) BASIC20.28■□□□□ 0.84
FREM3P0C091 AC133561.1-201ENST00000568600 2415 ntBASIC20.28■□□□□ 0.84
FREM3P0C091 VSTM4-201ENST00000298454 2170 ntAPPRIS P3 TSL 2 BASIC20.28■□□□□ 0.84
FREM3P0C091 HOXA10-206ENST00000613671 2175 ntTSL 5 BASIC20.28■□□□□ 0.84
FREM3P0C091 HES6-206ENST00000409574 738 ntTSL 2 BASIC20.28■□□□□ 0.84
FREM3P0C091 SCO2-204ENST00000543927 1051 ntAPPRIS P1 TSL 2 BASIC20.28■□□□□ 0.84
FREM3P0C091 AC096887.1-203ENST00000607203 768 ntAPPRIS ALT2 TSL 5 BASIC20.28■□□□□ 0.84
FREM3P0C091 SDSL-201ENST00000345635 1397 ntAPPRIS P1 TSL 1 (best) BASIC20.28■□□□□ 0.84
FREM3P0C091 CCDC154-201ENST00000389176 2212 ntAPPRIS P5 TSL 5 BASIC20.28■□□□□ 0.84
FREM3P0C091 LRRC34-206ENST00000522526 1899 ntAPPRIS P3 TSL 1 (best) BASIC20.28■□□□□ 0.84
FREM3P0C091 ANKRD54-201ENST00000215941 2184 ntAPPRIS P1 TSL 1 (best) BASIC20.28■□□□□ 0.84
FREM3P0C091 CDX1-201ENST00000231656 1758 ntAPPRIS P1 TSL 1 (best) BASIC20.27■□□□□ 0.84
FREM3P0C091 IQCJ-SCHIP1-202ENST00000460298 1884 ntAPPRIS ALT2 TSL 1 (best) BASIC20.27■□□□□ 0.84
FREM3P0C091 AKT1-201ENST00000349310 2866 ntAPPRIS P1 TSL 1 (best) BASIC20.27■□□□□ 0.84
FREM3P0C091 DPY19L1-209ENST00000638088 5075 ntAPPRIS ALT2 TSL 5 BASIC20.27■□□□□ 0.84
FREM3P0C091 HMGA2-206ENST00000536545 1788 ntTSL 1 (best) BASIC20.27■□□□□ 0.84
FREM3P0C091 LAMTOR1-201ENST00000278671 1179 ntAPPRIS P1 TSL 1 (best) BASIC20.27■□□□□ 0.84
FREM3P0C091 AL138724.1-201ENST00000606771 1088 ntBASIC20.27■□□□□ 0.84
FREM3P0C091 FLOT1-201ENST00000376389 1912 ntAPPRIS P1 TSL 1 (best) BASIC20.27■□□□□ 0.84
FREM3P0C091 AMZ2-202ENST00000359904 2402 ntAPPRIS P1 TSL 2 BASIC20.26■□□□□ 0.83
FREM3P0C091 NIPA2-205ENST00000539711 1412 ntTSL 2 BASIC20.26■□□□□ 0.83
FREM3P0C091 SPPL2B-211ENST00000614794 1559 ntTSL 1 (best) BASIC20.26■□□□□ 0.83
FREM3P0C091 AL353743.1-201ENST00000637846 1769 ntTSL 5 BASIC20.26■□□□□ 0.83
FREM3P0C091 EBPL-204ENST00000378272 766 ntTSL 3 BASIC20.26■□□□□ 0.83
FREM3P0C091 CLPSL2-202ENST00000403376 405 ntAPPRIS P3 TSL 1 (best) BASIC20.26■□□□□ 0.83
FREM3P0C091 LGR4-203ENST00000480977 492 ntTSL 2 BASIC20.26■□□□□ 0.83
FREM3P0C091 TGFBR3L-202ENST00000565886 1260 ntAPPRIS P1 TSL 5 BASIC20.26■□□□□ 0.83
FREM3P0C091 SIN3B-209ENST00000596802 2556 ntTSL 1 (best) BASIC20.26■□□□□ 0.83
FREM3P0C091 ZC3H14-219ENST00000556945 2075 ntTSL 5 BASIC20.26■□□□□ 0.83
FREM3P0C091 AC096541.1-201ENST00000445070 1807 ntTSL 2 BASIC20.25■□□□□ 0.83
FREM3P0C091 NIPSNAP2-201ENST00000322090 1999 ntAPPRIS P1 TSL 1 (best) BASIC20.25■□□□□ 0.83
FREM3P0C091 POU2F3-206ENST00000543440 1953 ntAPPRIS P1 TSL 1 (best) BASIC20.25■□□□□ 0.83
FREM3P0C091 ARL6IP4-201ENST00000315580 1644 ntAPPRIS P3 TSL 1 (best) BASIC20.25■□□□□ 0.83
FREM3P0C091 ST7L-221ENST00000490067 1780 ntTSL 1 (best) BASIC20.25■□□□□ 0.83
FREM3P0C091 SPRED3-204ENST00000587013 1539 ntTSL 5 BASIC20.25■□□□□ 0.83
FREM3P0C091 CCDC107-203ENST00000378407 899 ntAPPRIS ALT2 TSL 2 BASIC20.25■□□□□ 0.83
FREM3P0C091 RHOF-204ENST00000537265 699 ntTSL 2 BASIC20.25■□□□□ 0.83
FREM3P0C091 DIRAS1-202ENST00000585334 774 ntAPPRIS P1 BASIC20.25■□□□□ 0.83
FREM3P0C091 AC092902.2-206ENST00000625484 846 ntTSL 5 BASIC20.25■□□□□ 0.83
Retrieved 100 of 98,524 protein–RNA pairs in 16.8 ms